- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.C9.73.v1.A...' >
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- Transcript 'Boleac.CG.SB_v3.S553...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S553.g11558.01.t
Possible name(s)
TBX2; TBX3; TBX4
Gene model
Location
S553 [55,131 / 70,257]
Amino acid sequence
Length: 725
>Boleac.CG.SB_v3.S553.g11558.01.p
MIHDSMKPGPISPLQAVMSAYNPASLLSGRHAPDLSFLPPAYLPAAFGMPHCHPSMFFPK
SGAPSLTSIYDRLPYGXAMPDCPPNKLSEPDNNEPDDAQVELDNKALWDEFNGRGTEMVI
TKTGRRMFPSFKVKVSGLNKNAKYIMLMDIVAADDCRYKFHNSRWMVAGKADPELPKRMY
IHPDSPATGEQWMNRPGVSFHKLKLTNNIADPNGHTILNSMHKYQPRFHVVRCGDLSRLP
YCHFRTYIFKEMQFIAVTAYQNEKITQLKIDHNPFAKGFRDSGSGKREKRRQHFHLERQI
IGGQRTSSDDPRRHTNDDCQESRIDSRRFSASPEPKHLNSQSKDYGVKMRKMSDEQKHVT
NITSSANDVSQEQSVNSEFLSDSSSSSPDRRKSPEVTSSTRDTEPQDNKKSSGIHTKSDR
APIRRSPTMPVASSPATATSSTITSPIPIHANSFTGLGSYPNPLVPHFAAALQSHPYLHS
NQLSALSAAMSAHGNSFPAGTGPLNPALLHAAVANDFGSXGPSSSRSPTFLPHHNPAALS
SLLSSVGPYANFLPYAYNPYLPGGGRPFAAAAAAAAAKEFDASSRLGPSRALAESLYRHS
AAFAKGDVTIPHPTKIPGIIPHHSRYSPYHIPKGQHLEYASHCRSAASPPSKYSDNRHNV
SSASSVSNASPSRSTMRVDSSDADSEMKEEPVSPKSISSRSAVQELRNMERLVSGLERRS
KISSD
Nucleotide sequence
Length: 2,341
>Boleac.CG.SB_v3.S553.g11558.01.t
TTTAATTCAGATTTTCAGTAATCAAATATTACAAAGAATAGAAATTATTCTATGTGAAAC
CAGCTCATTGATGNGATATAGAAGTCATCGTGTTTATAAACTTTTGAAATAATATAGAAA
GATTGAAAATCGAAGAATTTTCCTTCAAAACATTCCTTCGTCGAGTATGATACACGACTC
AATGAAGCCCGGACCGATTTCTCCGTTACAAGCCGTAATGTCGGCTTACAACCCTGCGAG
TTTATTGTCGGGACGACATGCACCGGACTTATCCTTTTTACCGCCTGCTTATTTACCTGC
TGCATTTGGAATGCCTCATTGCCACCCTTCCATGTTTTTTCCAAAAAGTGGGGCGCCATC
TTTAACATCGATATATGATCGACTTCCTTACGGGANTGCGATGCCAGATTGTCCGCCAAA
TAAATTGTCCGAGCCCGATAACAACGAACCCGACGATGCTCAAGTAGAACTTGATAACAA
AGCTCTTTGGGATGAGTTCAATGGACGAGGAACGGAAATGGTGATCACAAAAACTGGAAG
ACGAATGTTCCCATCGTTCAAAGTGAAAGTAAGCGGACTGAATAAAAACGCAAAGTACAT
CATGCTGATGGACATTGTTGCTGCTGATGACTGCCGATATAAATTTCATAATTCTCGATG
GATGGTTGCGGGAAAAGCTGATCCGGAACTGCCGAAGAGAATGTACATTCATCCGGATTC
TCCGGCAACAGGAGAACAATGGATGAACCGGCCTGGTGTATCTTTCCACAAATTAAAGCT
TACCAATAATATCGCTGATCCAAACGGCCATACCATCCTCAACTCCATGCATAAATATCA
ACCTCGCTTCCATGTTGTAAGGTGTGGTGATCTATCAAGGCTTCCGTATTGCCATTTTCG
CACGTATATCTTCAAGGAAATGCAGTTTATTGCGGTGACGGCCTATCAAAACGAAAAGAT
CACACAATTGAAAATCGACCATAATCCATTTGCTAAAGGTTTCAGAGATTCTGGTAGCGG
CAAAAGAGAAAAAAGAAGACAGCACTTCCATCTGGAGCGACAGATAATAGGAGGGCAAAG
AACTTCTTCTGATGATCCCAGAAGGCATACAAATGATGATTGTCAAGAGTCACGAATTGA
TTCGCGGAGATTCTCTGCTTCACCCGAACCTAAGCATCTTAATTCACAATCAAAAGATTA
TGGAGTCAAGATGCGAAAGATGAGTGATGAACAAAAACATGTGACGAACATAACTTCCTC
AGCAAATGATGTATCTCAAGAGCAATCGGTCAATTCCGAATTTTTATCAGATAGCTCTTC
CAGCTCTCCGGATCGTAGAAAATCTCCGGAAGTAACATCATCAACTCGCGACACCGAACC
TCAAGATAACAAAAAGTCTTCTGGGATCCATACAAAGAGCGATCGGGCGCCAATAAGAAG
GTCACCTACAATGCCAGTGGCGTCATCCCCAGCAACTGCCACGTCATCAACCATTACGTC
ACCAATCCCAATTCATGCCAATAGTTTTACGGGTCTCGGAAGTTATCCCAATCCGCTCGT
TCCCCATTTTGCTGCTGCTCTTCAGTCCCATCCCTATCTTCATTCGAACCAATTATCCGC
ATTATCAGCCGCCATGTCAGCGCATGGAAATTCATTTCCGGCCGGTACCGGACCTCTAAA
TCCTGCGTTATTGCATGCGGCTGTTGCGAATGACTTTGGCAGCANTGGACCTTCATCCTC
CAGATCGCCAACGTTTTTGCCCCATCATAATCCAGCCGCTTTATCGTCGCTTCTTTCTTC
AGTTGGTCCATACGCAAACTTTCTCCCGTACGCATACAATCCGTATCTACCAGGAGGTGG
CAGACCATTCGCCGCCGCTGCTGCTGCGGCAGCTGCTAAAGAGTTTGACGCATCATCTAG
ACTGGGTCCTTCAAGAGCGTTGGCTGAGAGCCTTTATAGACATTCAGCAGCATTTGCGAA
AGGTGATGTTACCATCCCTCACCCTACAAAAATACCAGGTATAATACCACATCATTCGAG
ATACTCACCATATCACATTCCTAAGGGACAACATTTGGAATACGCCAGTCATTGCCGTTC
GGCTGCATCTCCCCCGTCAAAATATAGTGACAACCGCCACAATGTATCTAGCGCTTCATC
AGTTAGCAATGCAAGTCCATCAAGGAGTACTATGCGAGTCGACTCAAGTGACGCAGATTC
TGAAATGAAAGAAGAACCTGTGTCACCCAAGTCGATTAGCAGTCGCAGTGCGGTACAAGA
GTTGAGAAATATGGAGCGTTTAGTATCTGGATTGGAAAGACGAAGTAAAATTTCAAGCGA
C
| PANTHER |
TF_T-box (IPR001699) - T[5-58] 3.5E-151 - T[64-721] 3.5E-151 |
| Gene3D |
T-box_sf (IPR036960) - T[95-287] 1.5E-94 |
| SMART |
TF_T-box (IPR001699) - T[97-286] 4.3E-122 |
| CDD |
TF_T-box (IPR001699) - T[97-283] 1.51336E-119 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[98-281] 2.49E-77 |
| Pfam |
TF_T-box (IPR001699) - T[100-281] 1.8E-82 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[102-281] 72.359 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[107-126] . |
| PRINTS |
TF_T-box (IPR001699) - T[115-139] 5.8E-39 - T[180-193] 5.8E-39 - T[217-231] 5.8E-39 - T[252-265] 5.8E-39 - T[273-281] 5.8E-39 |
| PRINTS |
TF_Brachyury (IPR002070) - T[160-180] 6.5E-6 - T[222-239] 6.5E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX2_HUMAN | 76.471 % | 350 | 1.59E-110 |
| TBX3_HUMAN | 40.769 % | 335 | 1.49E-104 |
| TBX4_HUMAN | 61.376 % | 248 | 1.61E-73 |