- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C5.166.v2....' >
- Molecular Tool 'Ci-fibrn MO (Yamada 2009)' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Boleac.CG.SB_v3.S560...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S560.g11644.01.t
Possible name(s)
FABP4; FABP5; PMP2
Gene model
Location
S560 [78,148 / 79,795]
Amino acid sequence
Length: 132
>Boleac.CG.SB_v3.S560.g11644.01.p
MASAMNGEWKMASSDKFDEYMKELGVNVALRKMGNLAKPTLTVEVDENNFYYKSKSTFKT
LELRAKIGVEFDEETPDGRKVKTIFTWNGNKLVQTQKWDGKVSTIERYVDDKGDYINICT
MNNVVCTRVYKR
Nucleotide sequence
Length: 544
>Boleac.CG.SB_v3.S560.g11644.01.t
TTGTGTTTGCTAGAATCTGCTCTCCAAGTCTGAACTTAATATTTATATAATTATCAAAAT
GGCTTCTGCTATGAACGGAGAATGGAAGATGGCTTCTTCTGACAAATTTGACGAATACAT
GAAAGAACTTGGTGTCAATGTGGCTTTACGNAAAATGGGAAATTTGGCGAAACCAACATT
AACAGTCGAGGTTGACGAAAATAATTTCTATTACAAAAGCAAAAGCACATTTAAAACACT
CGAACTCAGAGCGAAAATCGGAGTGGAATTCGACGAAGAAACACCAGATGGTCGTAAAGT
CAAGACAATTTTCACGTGGAACGGTAACAAACTCGTGCAAACTCAAAAATGGGACGGGAA
AGTATCTACTATTGAACGATACGTGGACGACAAAGGAGATTACATCAATATCTGTACGAT
GAACAATGTCGTCTGTACACGTGTCTACAAGAGGTGATTCTGCTCCGACTATGACGTCAC
TAAACTCGTAATTCCGTAGTTTACTTCGGATTTCTGTCATTTGCATTAAATTATGCCATA
GCCA
| Gene3D |
Calycin (IPR012674) - T[1-132] 1.2E-52 |
| SUPERFAMILY |
Calycin (IPR012674) - T[2-132] 1.24E-46 |
| PANTHER |
ILBP (IPR031259) - T[3-132] 7.1E-45 |
| PRINTS |
Fatty_acid-bd (IPR000463) - T[5-27] 6.1E-20 - T[64-80] 6.1E-20 - T[112-132] 6.1E-20 |
| Pfam |
Lipocln_cytosolic_FA-bd_dom (IPR000566) - T[6-132] 1.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FABP5_HUMAN | 47.656 % | 130 | 4.99E-40 |
| MYP2_HUMAN | 45.455 % | 121 | 1.56E-36 |
| FABP4_HUMAN | 46.97 % | 120 | 5.23E-36 |