- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'Boleac.CG.SB_v3.S572...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S572.g11765.01.t
Possible name(s)
CSMD2; SELE; SELP
Gene model
Location
S572 [41,106 / 50,921]
Amino acid sequence
Length: 933
>Boleac.CG.SB_v3.S572.g11765.01.p
MTSSVVPENVLVDCSNSNLGGSVCDFSCSKGYTINGSAMDTKCIDSNDDGIGDWSNSLPQ
CKKYSFLFKGYVNCTDSNFYGSFCNFTCEYSYRVVGAKSAVCMDRDNDGVGDWNDSMPIC
EKYYIPDPPDCPENLEPTDGSMICSDDRYFGSICTFYCNPGFVLFGASEMECLEKEDGSG
DWTDMFPVCLTYLGECMVAMSDPDHGNVTCSGKHYVTSECTFACDEGYHVVGDNIVVCED
NDFDRLGEWNARPAICFLITCDAVDPTAFSQETQYSCTNGNYGDSECEFSCPDKFTLGSG
ASKITCLDVDDSSEGKWSEAIPTCLDILCEELVIEADTLYSCADLNHIDSVCEFQCNVGM
KLDSDRDEITCQDLDGDGTDIVCPNILLSDLSPETVYSCSNANLGNSICTFSCPSHMRLD
RAVNSVSCVDKDGDGVGEWTDELPFCKYRMGSSCAFRCESGYVLSHVDVVICGMTAAENL
GEWKGTEPKCDPYQFVCPLISSFEFSTDTEILCTNGNNRDSRCTFNCPEDLELWPNVEII
DCVDRDRDGIGEWSPDPPQCRNSRCTFNCPEDLELWPNVEIIDCVDRDRDGIGEWSPDPP
QCRTGKCYPDLKAMFSNDADCYGGNDPGAECDIKCSHTSKYYGEKAKYVCANKQLQDGAG
FWDNDILSCADIPVIGIAKGEVAREFFQTFSIPTYFVGHPEDYEHFSADFLEKIVKYDCR
VLQCLPILSSPEFGTLVCTDENSVGSRCTIHCDPGYKLVGSGDILCQDSSKAGQVAWSSS
PPVCEGCAHGNCEKDIIVLLDSSGSVTNADLEWVRKSIVGILEGVQGELDTGMTQVGLIQ
YSGKSSFLCSSGAVTLEYQIELELGFYPFRQVEEAMSALPRLGRCTATGQAISLVTKHFQ
TLGRRSVHWILVLLTDARSNDDVVGPIQNAKEA
Nucleotide sequence
Length: 2,799
>Boleac.CG.SB_v3.S572.g11765.01.t
ATGACTTCATCTGTAGTTCCAGAAAATGTATTAGTGGATTGCTCTAATTCCAACCTTGGT
GGATCTGTTTGTGACTTCTCATGCTCAAAAGGATACACCATTAATGGCTCAGCCATGGAT
ACAAAATGCATTGACAGTAATGATGACGGGATTGGGGATTGGAGCAATAGTTTACCTCAA
TGTAAAAAGTACTCGTTCTTGTTCAAGGGCTATGTAAATTGTACTGACTCAAATTTTTAT
GGATCATTCTGTAATTTCACTTGTGAGTATAGCTATCGAGTGGTTGGTGCTAAGTCAGCA
GTTTGCATGGACCGTGACAATGATGGAGTTGGAGATTGGAATGATAGCATGCCAATATGT
GAAAAATACTATATCCCTGATCCGCCTGATTGTCCAGAAAACTTGGAACCTACTGATGGA
TCCATGATATGCTCCGATGACAGATATTTTGGATCTATTTGTACTTTCTACTGCAACCCA
GGATTTGTCTTGTTTGGCGCAAGTGAAATGGAATGTCTAGAGAAGGAAGATGGCTCTGGA
GATTGGACTGATATGTTTCCTGTCTGTTTGACATATCTTGGTGAATGCATGGTAGCCATG
TCTGATCCTGATCATGGTAATGTTACCTGCAGTGGAAAGCATTATGTGACGTCAGAATGT
ACATTTGCATGTGATGAAGGGTATCATGTTGTTGGCGACAATATTGTTGTTTGTGAAGAC
AATGATTTCGACAGATTGGGAGAATGGAATGCGCGACCAGCGATATGCTTTCTGATCACC
TGTGATGCTGTCGACCCTACAGCCTTTTCTCAGGAGACTCAGTATTCTTGTACTAATGGA
AATTATGGTGATAGTGAATGTGAATTTTCTTGTCCGGACAAATTCACCTTGGGAAGTGGG
GCATCTAAGATAACATGCTTGGATGTAGATGATAGTTCTGAAGGAAAATGGAGCGAAGCC
ATACCAACATGCCTGGACATACTATGTGAGGAGCTTGTCATTGAAGCAGACACACTGTAC
TCATGCGCGGATTTGAATCACATTGATTCTGTTTGTGAATTTCAATGCAACGTTGGAATG
AAACTCGATAGCGACAGAGATGAAATTACATGTCAAGATCTTGATGGTGATGGAACGGAT
ATTGTTTGTCCAAATATACTCCTTTCCGATCTATCGCCTGAGACAGTGTATTCTTGCTCT
AATGCAAATCTTGGAAACTCAATTTGTACNTTTTCTTGTCCCTCTCATATGAGGCTTGAT
AGAGCTGTGAACTCGGTTAGTTGTGTGGACAAAGACGGTGATGGTGTTGGGGAGTGGACT
GATGAATTACCATTTTGTAAGTACCGGATGGGCTCATCATGTGCTTTTCGTTGTGAAAGT
GGGTATGTTCTGAGCCACGTCGATGTTGTTATATGTGGGATGACTGCTGCTGAGAATCTT
GGAGAATGGAAGGGCACAGAGCCAAAGTGTGATCCATACCAGTTTGTCTGCCCGCTCATA
TCATCTTTCGAATTTTCAACGGACACAGAAATTCTCTGTACGAATGGCAATAACAGAGAT
TCGCGATGCACTTTCAACTGCCCTGAAGATTTAGAATTATGGCCAAATGTGGAAATCATT
GACTGTGTAGATAGAGACAGAGATGGCATTGGCGAATGGTCCCCTGATCCACCCCAGTGC
AGAAATTCGCGATGCACTTTCAACTGCCCTGAAGATTTAGAATTATGGCCAAATGTGGAA
ATCATTGACTGTGTAGATAGAGACAGAGATGGCATTGGCGAATGGTCCCCTGATCCACCC
CAGTGCAGAACGGGCAAATGCTACCCNGATCTCAAGGCCATGTTCTCTAATGATGCTGAT
TGCTATGGAGGCAATGATCCTGGAGCTGAATGTGATATAAAATGTTCTCACACTTCTAAA
TATTATGGAGAAAAGGCCAAATATGTTTGTGCCAACAAGCAGCTGCAGGATGGAGCGGGA
TTTTGGGACAATGATATTCTGTCTTGTGCAGATATTCCAGTCATAGGTATTGCAAAAGGT
GAAGTTGCTAGGGAATTTTTTCAAACATTCTCGATACCAACATATTTTGTCGGCCACCCG
GAAGACTATGAGCATTTTTCTGCTGACTTCCTTGAAAAAATCGTCAAGTATGATTGCAGA
GTTTTGCAATGCCTACCTATACTTTCCTCGCCTGAGTTTGGAACTCTAGTTTGCACCGAT
GAGAACTCCGTCGGGTCGCGATGCACCATTCATTGTGACCCTGGGTACAAATTAGTTGGA
AGTGGAGATATCTTATGTCAGGATTCAAGTAAAGCAGGTCAGGTGGCATGGAGTAGCTCA
CCACCAGTCTGTGAAGGCTGTGCTCATGGAAACTGTGAAAAAGACATTATTGTTTTGTTG
GACAGTTCAGGCAGTGTGACTAATGCTGATCTTGAATGGGTCAGAAAATCAATTGTCGGA
ATTTTGGAAGGAGTGCAAGGAGAATTAGATACTGGAATGACTCAAGTTGGTTTGATTCAA
TACAGTGGAAAGTCATCATTTTTGTGTTCATCTGGTGCAGTCACTCTCGAATACCAGATT
GAACTGGAACTTGGGTTCTATCCTTTTCGACAAGTGGAAGAGGCGATGTCTGCTTTGCCA
AGACTAGGACGCTGCACGGCAACTGGTCAAGCAATATCTCTTGTCACAAAACATTTTCAA
ACTTTGGGGAGACGCTCGGTTCACTGGATTTTGGTGTTACTAACAGATGCTCGTTCGAAT
GATGATGTTGTTGGCCCAATCCAAAATGCAAAAGAGGCT
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[1-61] 5.9E-5 - T[62-120] 0.28 - T[131-189] 1.5E-8 - T[197-256] 1.6E-6 - T[261-324] 0.36 - T[329-383] 0.36 - T[428-490] 0.065 - T[497-560] 14.0 - T[724-784] 3.4E-9 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[6-62] 1.64794E-5 - T[70-121] 1.25047E-4 - T[131-189] 7.01435E-9 - T[202-256] 6.81537E-8 - T[274-324] 5.53315E-4 - T[444-490] 2.0258E-4 - T[726-785] 1.78025E-9 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[6-63] 3.06E-8 - T[61-129] 4.03E-10 - T[130-192] 1.08E-11 - T[202-264] 3.89E-11 - T[274-333] 3.06E-8 - T[448-494] 2.08E-7 - T[510-561] 3.06E-5 - T[728-786] 1.11E-11 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[59-122] 8.344 - T[129-191] 9.328 - T[194-258] 7.743 - T[259-326] 8.572 - T[426-492] 7.94 - T[540-604] 7.132 - T[722-786] 8.862 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[67-120] 0.0057 - T[128-189] 5.5E-5 - T[201-244] 1.6E-5 - T[281-324] 0.0029 - T[448-490] 0.0012 - T[727-784] 5.0E-8 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[779-932] 5.93E-21 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[792-933] 8.2E-17 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[795-933] 15.237 |
| Pfam |
VWF_A (IPR002035) - T[795-932] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 24.464 % | 92.4 | 7.39E-19 |
| LYAM3_HUMAN | 25.44 % | 131 | 2.83E-31 |
| LYAM2_HUMAN | 29.041 % | 133 | 3.65E-32 |