- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'Moocul.CG.ELv1_2.S63...' >
- Transcript 'KH2012:KH.C10.174.v1...' >
- Transcript 'Boleac.CG.SB_v3.S5.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S5.g10736.01.t
Possible name(s)
MLH1; PMS1; PMS2
Gene model
Location
S5 [185,678 / 194,094]
>Boleac.CG.SB_v3.S5.g10736.01.p
MTMGEHPVIKKLTEDVVNRIAAGEVIQRPSNAIKEMLENSLDAGSKSITVSIKGGGLKML
QISDDGHGIRKEDMEIVCERFTTSKLREFGDLRSIATFGFRGEALASISHVSHLTICTRT
KDSKCSYKASYIDGCIKGSPRPTAGSVGTQITVEDLFYNVPTRRXALNNPSDEHQRIADV
VSKYSIHNAGVSFTLRKAGEGGPSGGITVRTQQGSTILDNIAVIYGSQIAKDLICIDQDS
SSLKYRMRGYISNANCSMKKFIFLLFINNRLVDCQSLKRGLSNIYQTYLPKGTHPFVYMS
LMISPGNIDVNVHPTKHEVHFLNEEEIIESIQRATEAHLRGCNSSRTFYTQTLLPDVSVE
VTKSKSSKPTGHCEPRVYAHEMVRTDGKLQKLXAFLKPRPSGSFSNLTTRSSDXNCSSDD
IEVIDEKASTDAQCKDIHLETLKTTDADDVTIQPPAKKSCLDFQATVKKTKASPVKESES
LTGKYQNKNNQGEPRVNKKERLWKLTEDVVNRIAAGEVIQRPSNAIKEMLENSLDAGSKS
ITVSIKGGGLKMLQISDDGHGIRKEDMEIVCERFTTSKLREFGDLRSIATFGFRGEALAS
ISHVSHLTICTRTKDSKCSYKASYIDGCIKGSPRPTAGSVGTQITVEDLFYNVPTRRXAL
NNPSDEHQRIADVVSKYSIHNAGVSFTLRKAGEGGPSGGITVRTQQGSTILDNIAVIYGS
QIAKDLICIDQDSSSLKYRMRGYISNANCSMKKFIFLLFINNRLVDCQSLKRGLSNIYQT
YLPKGTHPFVYMSLMISPGNIDVNVHPTKHEVHFLNEEEIIESIQRATEAHLRGCNSSRT
FYTQTLLPDVSVEVTKPKSSKPTGHCEPRVYAHEMVRTDGKLQKLDAFLKPRPSGSFSNL
TTRSSDVNCSSDDIEVIDEKASTDAQCKDIHLETLKTTDADDVTIQPPAKKSCLDFQATV
KKTKASPVKESESVSLTTASFPERRVIRLTSILKLQQEIKENAQSDLVSLIGNHVWVGCI
DPELALIQHQTKLFLANTTKLSEELFYQIMIFDFGNYGIYRLSEAAPTFDLVMLALDSED
SGWQPANGNKYDLAKHVVEFLKSKREMLADYFSFELDEKGNIXGLPMLLPDYEPCLDGLP
MFILRLTTEXDWESEIDCFRTFCRECAKFYSVRKGYIDMPELLEKTSKLGEEKPDGENLI
NSSYASEDCSATVEKHDTLPLGKSWKWVVEHVIYRALQKXLLPAKAMLXDRSLXQLANLT
DLYKVFERC
>Boleac.CG.SB_v3.S5.g10736.01.t
ATGACCATGGGTGAACATCCTGTCATTAAGAAGCTCACAGAAGATGTTGTAAACCGCATT
GCTGCGGGAGAGGTTATCCAACGTCCATCAAACGCAATCAAAGAGATGCTGGAAAATAGC
CTCGATGCTGGCTCAAAGTCGATTACAGTGTCAATCAAAGGTGGTGGCCTGAAAATGCTG
CAAATATCCGATGATGGACATGGAATCCGTAAGGAAGACATGGAAATAGTTTGTGAGAGA
TTTACTACAAGCAAGTTACGTGAATTTGGTGACCTTCGTAGCATAGCCACGTTTGGTTTT
CGGGGTGAAGCTCTTGCCAGCATTAGTCATGTTTCCCATCTGACTATATGCACCAGAACA
AAAGACAGCAAATGCTCATACAAAGCATCATATATTGATGGTTGTATAAAAGGTTCACCC
AGACCAACTGCAGGAAGTGTTGGNACACAAATTACAGTCGAAGACCTGTTTTATAATGTT
CCTACAAGAAGGAANGCTTTAAATAACCCATCTGATGAGCATCAAAGAATTGCAGATGTA
GTGAGTAAATATTCCATTCATAATGCAGGTGTTTCATTTACGTTGAGAAAGGCTGGAGAA
GGTGGTCCATCAGGGGGAATAACAGTGCGAACACAACAAGGCTCGACCATATTAGACAAT
ATTGCTGTCATATATGGCTCTCAAATAGCAAAAGATTTGATTTGCATTGATCAAGACAGC
TCNTCTCTCAAATACAGAATGCGTGGATATATAAGCAATGCGAATTGTTCAATGAAGAAG
TTCATATTCCTTCTGTTCATTAATAATCGTCTTGTNGATTGCCAATCATTGAAGCGTGGC
TTGTCAAACATATATCAAACATATTTGCCTAAAGGCACTCATCCATTTGTTTACATGAGC
TTGATGATTTCACCAGGAAATATTGATGTCAATGTTCACCCAACAAAACATGAAGTTCAC
TTTTTGAATGAAGAAGAAATAATTGAATCAATCCAAAGAGCAACAGAGGCTCATCTTCGA
GGATGCAATTCGTCACGGACATTTTACACTCAAACATTGTTACCAGATGTTTCAGTTGAG
GTAACAAAGTCCAAATCAAGCAAACCAACAGGTCATTGTGAACCACGAGTATATGCTCAT
GAAATGGTACGGACTGATGGCAAGTTACAGAAACTTGANGCATTTCTAAAGCCTAGGCCA
TCCGGTTCATTCTCAAACTTGACTACCCGTAGTAGTGATNTCAACTGTTCCTCGGATGAT
ATTGAAGTGATTGATGAGAAAGCTTCTACAGATGCTCAATGTAAAGATATACACTTGGAA
ACTCTAAAAACAACAGATGCTGATGATGTAACAATTCAGCCTCCGGCAAAGAAGTCTTGT
CTTGATTTTCAAGCTACAGTGAAAAAGACCAAGGCTTCACCAGTAAAAGAATCGGAATCT
CTTACGGGAAAATATCAAAACAAAAACAATCAAGGTGAGCCCAGAGTGAATAAAAAAGAG
AGACTTTGGAAGCTCACNGAAGATGTTGTAAACCGCATTGCTGCGGGAGAGGTTATCCAA
CGTCCATCAAACGCAATCAAAGAGATGCTGGAAAATAGCCTCGATGCTGGCTCAAAGTCG
ATTACAGTGTCAATCAAAGGTGGTGGCCTGAAAATGCTGCAAATATCCGATGATGGACAT
GGAATCCGTAAGGAAGACATGGAAATAGTTTGTGAGAGATTTACTACAAGCAAGTTACGT
GAATTTGGTGACCTTCGTAGCATAGCCACGTTTGGTTTTCGGGGTGAAGCTCTTGCCAGC
ATTAGTCATGTTTCCCATCTGACTATATGCACCAGAACAAAAGACAGCAAATGCTCATAC
AAAGCATCATATATTGATGGTTGTATAAAAGGTTCACCCAGACCAACTGCAGGAAGTGTT
GGNACACAAATTACAGTCGAAGACCTGTTTTATAATGTTCCTACAAGAAGGAANGCTTTA
AATAACCCATCTGATGAGCATCAAAGAATTGCAGATGTAGTGAGTAAATATTCCATTCAT
AATGCAGGTGTTTCATTTACGTTGAGAAAGGCTGGAGAAGGTGGTCCATCAGGGGGAATA
ACAGTGCGAACACAACAAGGCTCGACCATATTAGACAATATTGCTGTCATATATGGCTCT
CAAATAGCAAAAGATTTGATTTGCATTGATCAAGACAGCTCATCTCTCAAATACAGAATG
CGTGGATATATAAGCAATGCGAATTGTTCAATGAAGAAGTTCATATTCCTTCTGTTCATT
AATAATCGTCTTGTNGATTGCCAATCATTGAAGCGTGGCTTGTCAAACATATATCAAACA
TATTTGCCTAAAGGCACTCATCCATTTGTTTACATGAGCTTGATGATTTCACCAGGAAAT
ATTGATGTCAATGTTCACCCAACAAAACATGAAGTTCACTTTTTGAATGAAGAAGAAATA
ATTGAATCAATCCAAAGAGCAACAGAGGCTCATCTTCGAGGATGCAATTCGTCACGGACA
TTTTACACTCAAACATTGTTACCAGATGTTTCAGTTGAGGTAACAAAGCCCAAATCGAGC
AAACCAACAGGTCATTGTGAACCACGAGTATATGCTCATGAAATGGTACGGACTGATGGC
AAGTTACAGAAACTTGATGCATTTCTAAAGCCTAGGCCATCCGGTTCATTCTCAAACTTG
ACTACCCGTAGTAGTGATGTCAACTGTTCCTCGGATGATATTGAAGTGATTGATGAGAAA
GCTTCTACAGATGCTCAATGTAAAGATATACACTTGGAAACTCTAAAAACAACAGATGCT
GATGATGTAACAATTCAGCCTCCGGCAAAGAAGTCTTGTCTTGATTTTCAAGCTACAGTG
AAAAAGACCAAGGCTTCACCAGTAAAAGAATCGGAATCTGTTAGTTTGACTACGGCATCT
TTTCCTGAGCGACGAGTNATACGATTAACAAGTATATTAAAATTGCAGCAGGAGATAAAG
GAAAATGCACAAAGTGATCTTGTAAGTCTTATTGGAAACCATGTATGGGTTGGGTGTATT
GATCCTGAACTGGCTTTGATACAGCATCAAACCAAACTTTTTCTTGCAAACACAACCAAA
CTGTCAGAGGAGCTGTTTTATCAAATTATGATTTTTGATTTTGGAAACTATGGCATTTAC
CGACTGTCTGAGGCTGCTCCTACATTCGACTTAGTTATGTTAGCTTTAGATAGTGAAGAC
AGTGGCTGGCAGCCAGCAAATGGTAACAAGTACGACCTTGCCAAACATGTTGTTGAGTTT
CTCAAAAGTAAAAGAGAGATGTTGGCGGACTACTTTTCGTTTGAACTTGATGAAAAAGGG
AATATTNTGGGGCTACCTATGCTTTTGCCAGATTATGAGCCNTGTTTAGATGGTCTGCCG
ATGTTCATACTTCGACTGACAACAGAANTTGACTGGGAATCGGAAATTGACTGTTTTCGA
ACTTTCTGCCGTGAGTGCGCAAAATTCTATTCTGTACGTAAAGGCTATATTGATATGCCA
GAATTACTTGAGAAGACTTCCAAACTTGGAGAAGAAAAACCGGATGGAGAAAATTTAATC
AACTCATCGTACGCTTCTGAAGATTGCAGTGCTACAGTTGAGAAACATGACACATTGCCC
TTAGGTAAATCTTGGAAATGGGTTGTTGAACATGTCATTTACAGAGCATTACAAAAAATN
TTACTGCCTGCAAAAGCAATGCTGCNTGATAGATCTTTANTGCAATTGGCAAATTTGACC
GATCTTTACAAAGTTTTTGAGCGTTGCTGA
PANTHER |
DNA_mismatch_repair_MLH1 (IPR011186) - T[7-479] 0.0 - T[501-1269] 0.0 |
Gene3D |
HATPase_C_sf (IPR036890) - T[8-225] 4.4E-74 - T[503-718] 6.8E-73 |
SUPERFAMILY |
HATPase_C_sf (IPR036890) - T[9-226] 4.58E-48 - T[505-719] 2.36E-47 |
TIGRFAM |
DNA_mismatch_repair_fam (IPR002099) - T[9-320] 3.6E-97 - T[504-813] 7.2E-96 |
CDD |
HATPase_C (IPR003594) - T[32-114] 8.32589E-8 - T[525-607] 8.32589E-8 |
ProSitePatterns |
DNA_mismatch_repair_CS (IPR014762) - T[99-105] . - T[592-598] . |
SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[207-339] 3.3E-30 - T[700-832] 3.3E-30 |
SMART |
DNA_mismatch_repair_C (IPR013507) - T[221-340] 1.1E-40 - T[714-833] 1.1E-40 |
Pfam |
DNA_mismatch_repair_C (IPR013507) - T[222-338] 3.3E-31 - T[715-831] 3.3E-31 |
Gene3D |
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[226-352] 3.3E-44 - T[719-845] 3.3E-44 |
Pfam |
Mlh1_C (IPR032189) - T[988-1269] 4.4E-85 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
PMS2_HUMAN | 28.346 % | 143 | 1.41E-34 |
PMS1_HUMAN | 24.571 % | 113 | 3.02E-25 |
MLH1_HUMAN | 51.21 % | 786 | 0 |