- Transcript 'Cisavi.CG.ENS81.R312...' >
- Transcript 'Haaura.CG.MTP2014.S6...' >
- Transcript 'Boleac.CG.SB_v3.S110...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Boleac.CG.SB_v3.S5.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S5.g10756.01.t
Possible name(s)
RREB1; ZNF845; ZNF91
Gene model
Location
S5 [441,316 / 459,269]
Amino acid sequence
Length: 1,369
>Boleac.CG.SB_v3.S5.g10756.01.p
MSRRKQTKPYKVEEEVKEEKRLRSRRSARESEPVENLIDADIGEADDEATIRTRSYTKCD
ECGKTLASSLSLARHKLTHSENKPYRCPHCNAGFKTSSNMHRHVRIHFRDTSADQVDPEP
VVNKSCLSMNNQRSSRQNIRTPNKFREFDVDLVRIGPRSSELSHSKSKRVKEEFDPDIQD
SSEKMKSDDNLDDNQEDYDTQSDSEPPPKAEDLVCHICSKTFISKFGLLTHTLTHNVKED
SSDPLRCHLCDQTFSTRRGLMMHNVVEHKVSKDKVNVKENDELFQKMAELDFSSMKFPHL
AEKVCAHLNHRTLIQDNDHIFLCKKCNVSFPLLEALRIHIRDKHRNRTKKKAEDLFSSIT
LVKNEDLKTIKDELEIVNGKDDDVMYTSKLLSIKYIPKWLQNQPDTNLTAYAKEPTDAMI
PYTSKLVLFDDVDQQNDTCDKSPKYSQPNSATKRKLRNQVDSSSILRSTVPRKIDINKIS
GEKNVFWCKICNYSSHEKSALVRHLLTHSGIRPYFCKVCDYAFTTKANCERHVRKRHNCV
SREQLDAAVRCDWELLKKAPREDIYMISGSNSACPVCQKSFSCNNELKLHMKTHEERHFV
CQLCGVRCTTRNNCVRHILHKHPGIPHQEANNIITFCGNGPNDLDLDIDAMTTDGTEDSS
DVDISRGRLGNRSNAKQSTNWKKPSLQRRPEIRQSMSKRPRLVEPNTSKRIPESESREVS
NQEDESKIEDDVRSNSGTHRSSKIIPLIPLLKIKAYNEAAAKSYAQMVALYEHLNFLNPV
QQNENLLNVADALNQTVGESLNEVPAGDEAYLAGETTFICHTCAKAFDSKELLESHVPQC
EYIAADDVADKYHDPNEMDFGSQENENGHPEGNDLEYNGNLVEDEWDHQNEVEDLSHQAN
GVVNPMGDDFINWQENAEENPSYNAKSSEESVSTQEYDSAYGSDKLRPGTYGKEPSYVED
SLLMSMFGDGESSESKGTDINNISSARYSSDLPTMVDMTGGSVSNVNFQGTVDAEDKALV
KRNYHGRQCPQCNKTFPWASSLRRHIMTHTGLKLYMCRLCKMRFTTRSNLIRHVYRRHGM
AKQHPEFASCLAKLNPSDSLLREVEADVRRHIDKRRRIPGTRNAYERLELDDKEDEESSA
PRKVGIRFNNFQSMLEDDPDTMLVDLDYSPRDELNGFDEPRQNNGDPPDEADSQEDDYGD
KEEEDVGRDTRAIKQEPEPENVYAKEVADSEMGGGNELNNEVNEDPSDDVDFDPKTEKKQ
TKSAKNSRNKQSSHFVCGLCKKIFKTVDELITHLEVHNIPHCWHCPICRVPFTNKYNCQR
HLSRRHARSDLEPKYVEDSKHGPRNARGLPKSNRSSPDWKPKKAAASAV
Nucleotide sequence
Length: 4,907
>Boleac.CG.SB_v3.S5.g10756.01.t
CCGATGAAATGGGACGTCTGAACGACTATCAACTGAAAGAGTTCGCAGGCTTTTTGGACG
CCAACGAGTAAGAAGAAGACAGCATGTACGTAAAAGGCTGCCAGCCGCCTCTCAACACTT
CGTTCGATGTCTGACTAATCGATGAGAACGCTGTTGAAGAGGAAGCTGGATCGTCTAGTG
CGTTTGCTTGGTAGACGCCTATTTGTTCGTTGAATGCGCTTTGCCGATTCAGCGTACGTT
ACGCCGAAAGAACATTGCTGTTCATCCGGACTACGCAAGCTGTTATTGCTCTGAGTCTGA
GATGTCGCGAAGAAAGCAAACCAAACCGTACAAAGTTGAAGAGGAGGTGAAAGAAGAAAA
GAGATTGCGAAGTCGGCGATCCGCACGAGAGAGTGAACCTGTTGAGAACTTGATTGATGC
TGATATCGGTGAAGCTGATGATGAGGCAACAATCCGTACTAGAAGCTACACTAAATGTGA
CGAGTGTGGCAAAACATTGGCATCATCTCTATCCTTGGCTCGACATAAATTGACTCATTC
GGAAAACAAGCCTTATCGATGTCCACATTGCAATGCCGGATTCAAAACTTCATCGAACAT
GCATAGGCATGTACGTATTCATTTTCGTGATACTTCTGCTGATCAAGTGGACCCGGAGCC
TGTTGTCAACAAATCATGTCTATCTATGAATAACCAAAGGTCATCCCGGCAGAATATCCG
TACGCCAAATAAATTCCGCGAGTTCGACGTCGACCTTGTCAGGATAGGTCCTCGATCATC
TGAACTTTCTCACTCAAAGTCAAAAAGAGTCAAAGAAGAGTTTGACCCGGACATCCAAGA
CTCTTCAGAGAAGATGAAGTCTGATGATAATTTGGATGATAATCAAGAAGATTATGACAC
TCAGTCTGATTCTGAACCACCACCCAAAGCGGAAGACTTGGTGTGTCACATCTGTAGCAA
AACTTTCATATCAAAATTTGGACTTCTAACACACACTCTCACTCATAATGTGAAGGAGGA
CAGCTCTGATCCATTGAGATGTCACTTATGTGACCAAACATTTTCTACACGGAGAGGATT
GATGATGCATAATGTTGTCGAACATAAGGTATCTAAAGACAAAGTTAATGTGAAGGAAAA
TGACGAATTATTTCAGAAGATGGCCGAATTGGACTTTTCATCTATGAAATTTCCACACCT
TGCAGAGAAAGTCTGTGCACACTTGAACCACCGAACGTTGATCCAAGACAATGATCATAT
ATTCCTTTGCAAGAAATGTAATGTCTCATTCCCACTGTTGGAAGCGTTAAGGATTCATAT
ACGAGATAAGCATCGGAACAGAACAAAGAAAAAGGCAGAAGATCTCTTTTCCAGCATAAC
TCTTGTGAAGAACGAAGACTTGAAGACTATCAAGGATGAACTTGAAATTGTCAACGGTAA
AGATGACGATGTTATGTACACTTCAAAGTTACTTTCTATCAAGTACATTCCAAAATGGCT
TCAAAACCAACCAGATACTAATCTAACTGCATATGCTAAAGAGCCAACTGATGCAATGAT
TCCCTATACAAGCAAATTAGTATTATTTGATGATGTGGATCAACAAAATGATACATGTGA
TAAAAGTCCGAAATACTCTCAACCCAACTCTGCAACAAAAAGAAAATTACGAAACCAAGT
GGATTCTAGTTCTATTCTAAGGAGCACTGTACCACGCAAAATAGACATCAATAAAATTTC
TGGAGAAAAGAATGTATTTTGGTGCAAGATTTGCAATTACTCATCTCATGAGAAGAGTGC
TCTCGTCAGACATCTTCTGACACACAGTGGCATCAGACCTTACTTTTGTAAAGTATGTGA
CTATGCATTCACCACAAAAGCAAACTGTGAGCGACATGTTCGAAAGAGACACAATTGTGT
ATCAAGAGAGCAGCTCGATGCAGCAGTTCGATGCGACTGGGAACTGCTCAAGAAAGCTCC
TCGTGAAGACATCTACATGATTTCAGGAAGCAACTCTGCTTGTCCTGTGTGCCAAAAGTC
ATTTTCATGTAACAATGAGTTGAAGCTACACATGAAAACACATGAAGAAAGACATTTTGT
ATGCCAGCTATGTGGGGTCCGTTGTACCACCAGAAATAATTGTGTGCGTCACATTCTGCA
TAAACATCCGGGAATTCCACACCAAGAGGCCAATAATATTATTACTTTCTGCGGGAATGG
ACCCAATGATCTCGATTTGGATATCGATGCAATGACAACTGATGGCACTGAAGATTCCAG
TGATGTTGATATAAGTCGAGGCCGACTAGGAAATCGAAGTAATGCAAAGCAGTCTACAAA
TTGGAAAAAGCCATCTCTACAGAGAAGACCGGAGATTAGACAATCGATGTCTAAGCGCCC
TCGGCTAGTGGAACCAAACACTTCAAAGCGAATTCCAGAATCTGAATCAAGGGAAGTTTC
AAACCAAGAAGATGAAAGCAAAATTGAAGATGATGTTAGATCAAATTCTGGCACTCATAG
ATCAAGCAAAATCATCCCATTGATACCTTTGTTGAAGATCAAAGCATATAATGAAGCTGC
TGCGAAATCGTATGCTCAAATGGTCGCCCTTTACGAACATCTGAACTTTCTCAATCCTGT
TCAGCAAAATGAAAATCTTTTAAATGTGGCTGATGCCTTGAACCAAACTGTGGGCGAATC
ATTAAATGAAGTACCGGCTGGCGATGAAGCGTATTTAGCAGGCGAAACAACTTTTATATG
TCATACTTGTGCCAAAGCATTCGATAGTAAGGAACTGCTGGAAAGCCATGTACCTCAATG
TGAATATATAGCTGCTGACGATGTTGCTGACAAGTACCACGATCCTAATGAAATGGATTT
TGGATCACAAGAGAATGAAAATGGCCACCCTGAAGGAAATGATTTAGAATATAATGGGAA
TTTGGTAGAAGACGAATGGGATCATCAGAATGAAGTAGAAGATTTGAGTCACCAAGCAAA
TGGTGTTGTAAATCCAATGGGCGACGATTTCATCAACTGGCAAGAAAATGCAGAAGAGAA
CCCATCCTACAATGCAAAATCGTCTGAGGAATCGGTCTCAACTCAAGAGTATGACTCTGC
TTATGGCAGCGACAAACTTCGTCCTGGAACCTACGGGAAAGAACCTTCTTACGTTGAAGA
CAGTTTGCTAATGTCAATGTTTGGTGACGGAGAGAGTTCAGAATCTAAAGGGACAGATAT
AAATAACATTTCAAGTGCAAGGTATTCATCGGATTTACCCACGATGGTTGACATGACTGG
TGGATCAGTGTCCAACGTCAATTTCCAAGGAACTGTCGATGCCGAGGATAAAGCATTGGT
GAAAAGAAATTATCATGGAAGACAATGTCCACAGTGTAATAAGACTTTTCCTTGGGCTTC
ATCTTTGAGAAGACATATTATGACACACACAGGGTTGAAGCTTTATATGTGTCGATTATG
CAAGATGCGTTTCACAACTCGATCCAATCTCATACGACATGTCTACCGAAGACACGGCAT
GGCAAAACAACATCCAGAATTTGCGTCTTGCCTTGCCAAATTGAATCCTTCAGATTCATT
ACTTCGAGAAGTGGAAGCCGATGTACGTCGTCATATTGACAAGAGAAGAAGGATCCCAGG
GACACGAAATGCGTATGAACGATTGGAGTTAGATGATAAAGAGGATGAGGAGAGTTCGGC
CCCGAGAAAGGTTGGGATTCGATTTAACAACTTTCAATCTATGTTGGAAGATGACCCGGA
TACAATGCTTGTGGATTTGGATTACAGTCCAAGAGATGAACTGAATGGATTTGATGAACC
CAGACAGAACAATGGTGACCCACCAGATGAAGCAGACTCACAAGAAGATGATTATGGAGA
TAAAGAAGAGGAAGATGTAGGAAGGGACACCAGAGCTATCAAACAAGAACCTGAACCGGA
AAATGTGTATGCAAAGGAAGTTGCTGATTCAGAAATGGGTGGAGGTAACGAATTGAACAA
TGAAGTGAATGAAGATCCCTCTGATGATGTAGATTTTGACCCGAAAACTGAGAAAAAGCA
AACAAAGTCGGCGAAAAATTCAAGAAATAAACAGTCATCACATTTTGTATGCGGACTATG
CAAGAAAATTTTCAAAACAGTGGATGAACTTATTACTCACCTCGAGGTTCATAACATTCC
TCACTGCTGGCATTGTCCAATCTGCAGAGTACCCTTCACCAACAAATATAACTGTCAACG
TCACTTGAGTCGAAGACACGCACGATCGGATCTCGAACCCAAGTATGTTGAAGACAGCAA
ACACGGACCACGCAATGCTCGGGGCCTACCCAAGTCCAACCGCTCCAGTCCTGATTGGAA
ACCAAAAAAGGCCGCCGCAAGCGCGGTTTAAATCACAACTTCATGACCGTGCAATCAAAA
AATACATTATTATACGAAAGTTGAAGGACTTCAAAATATAGATGCAAAATAGATGTACTG
TACATTGTACATTGTTCGAGACGGCAGCACAGATATGGATTAGATATAATCGCGGTGTGG
TTGCTCGGCACTTGAAATCGAATAGGCCTACTCGAATTGAAAAGTATGCGAGTCGGTCGG
TTCGAGTTTATGGATTACGCAGTGTGTGTAAAACGGGCCGGCCAACCTCGTGTATAANTA
AGCTCACTCGATCTTTATCGTCGATCATGGGTGTTAATATCAACGTTAAGATTATTTCTT
GTCTTTATCTGTGCAATCCAAACTTGGTGTTTTGATTCCCGTTTTTACCAAATGATAAGT
CATGGTTTACTGTAGTTGTGGTTAATAATAAATTTTCATTAAGCTTTAGTGGTACGTTAC
AAATGAATAGTAGTAGCCTACTGTATATTCACGTTCAACGCGCTCCC
| SMART |
Znf_C2H2_type (IPR013087) - T[57-79] 0.067 - T[85-107] 5.3E-4 - T[213-235] 0.037 - T[245-268] 0.11 - T[321-344] 0.031 - T[486-508] 0.66 - T[514-537] 0.0022 - T[572-594] 0.027 - T[599-622] 0.43 - T[818-838] 140.0 - T[1027-1049] 1.8E-4 - T[1055-1078] 0.0019 - T[1275-1297] 0.01 - T[1303-1326] 0.26 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[57-84] 12.757 - T[85-112] 11.614 - T[213-240] 9.286 - T[245-273] 9.141 - T[321-349] 9.369 - T[486-513] 11.177 - T[514-537] 9.307 - T[572-599] 10.118 - T[1027-1054] 12.445 - T[1055-1083] 10.408 - T[1275-1297] 9.577 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[58-107] 3.92E-13 - T[214-263] 1.91E-7 - T[485-534] 4.97E-11 - T[573-618] 1.36E-6 - T[1028-1074] 9.84E-14 - T[1273-1321] 1.43E-5 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[59-79] . - T[87-107] . - T[215-235] . - T[247-268] . - T[323-344] . - T[516-537] . - T[574-594] . - T[601-622] . - T[1029-1049] . - T[1057-1078] . - T[1277-1297] . - T[1305-1326] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RREB1_HUMAN | 31.944 % | 128 | 1.48E-29 |