- Transcript 'Phfumi.CG.MTP2014.S5...' >
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- Transcript 'KH2012:KH.C13.20.v1....' >
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- Transcript 'Boleac.CG.SB_v3.S616...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S616.g12413.01.t
Possible name(s)
LRRC74A; LRRC74B; NLRC3
Gene model
Location
S616 [12,250 / 18,860]
Amino acid sequence
Length: 638
>Boleac.CG.SB_v3.S616.g12413.01.p
MGTENESQPEVPRRSPESDDYRPRTAATGNRIGSANLDMQSPLQIDSDDYDTDLDIEGGL
TLITDDMPKSYTSMTPKDIYLRSCEQLGVVPASYFLANMKKPSLNMSHHGLGPKGAKAIS
PPLVVNTSIIDLDISDNWISTDGAKDIAEMLLENCYIATINLSQNKLGSKGAEYMRDMLM
ENSSLKSVNLSANDFKDSDAKYFAEAFRANFKLKEFDLSKNSFCEIGGEWLGQGIAANES
IEYLNLSWNHLRLKGALAVAAGMKINITIKKLDLSWNGFADEGAAAMAEALKSNNTLTWL
DLSHNRITGEGAKLLAKALLFNDTLRTLKIGDNPIDPESAYALLRAIADNERSSMEDLDL
TGINVNEEFKLLAQKLSQRSRASTSRTSFRYNVNRTEDMRTDFDACGQDADPMDVIHDFL
EKKRLRLIDLFRSFDKDLSWRITPLEFKRGILNAGIRLSKHQLRQLMADLDIDVDGQVNY
KEFNTGRKAVLLRRREEKRRKELEEKLKRAEKERFLDDWKDAMRKTRSPAQSPRESPIYS
PHSSRPSTGKASPRIDRGSNFNVEDKNHSSGPTLKPDLPTTVNRNFPVGRDGDLEKNTIS
VAVINRPRERSPLESAKRQSVQNKTFPVKYKTKPAMLK
Nucleotide sequence
Length: 1,917
>Boleac.CG.SB_v3.S616.g12413.01.t
ATGGGAACAGAGAATGAAAGTCAGCCAGAAGTTCCACGGCGTAGCCCTGAAAGTGATGAT
TACAGACCTCGAACGGCAGCTACCGGGAATAGGATAGGATCTGCAAATCTCGATATGCAA
TCGCCGCTACAAATTGACTCCGATGATTATGACACGGATCTGGATATTGAAGGTGGTTTG
ACTCTTATTACAGATGATATGCCAAAGTCTTACACAAGCATGACACCAAAAGATATCTAC
CTACGATCATGTGAACAACTGGGTGTGGTTCCAGCATCCTATTTTTTGGCAAATATGAAA
AAACCATCACTCAACATGAGTCATCATGGATTAGGACCCAAAGGAGCAAAGGCCATCTCT
CCACCCTTAGTGGTCAACACTTCTATCATTGACTTGGACATATCGGATAACTGGATATCG
ACAGATGGCGCTAAAGATATTGCGGAGATGCTTCTGGAAAATTGCTACATTGCGACTATT
AATTTATCACAAAACAAACTTGGCTCAAAGGGAGCTGAGTACATGCGTGATATGCTGATG
GAGAATTCGTCACTAAAATCGGTCAATTTATCAGCGAATGACTTCAAAGACAGCGATGCG
AAGTATTTCGCGGAAGCATTTCGAGCCAATTTTAAACTCAAGGAGTTCGACCTCAGCAAG
AACAGCTTTTGTGAGATCGGCGGGGAGTGGCTTGGACAAGGGATCGCTGCCAACGAATCC
ATTGAATACCTCAACTTAAGTTGGAACCATCTCCGACTAAAAGGTGCTTTAGCAGTTGCC
GCGGGCATGAAAATAAATATCACGATAAAAAAATTGGACCTTTCATGGAATGGTTTCGCA
GATGAAGGTGCTGCTGCCATGGCGGAAGCTTTGAAATCTAATAACACTCTGACATGGTTA
GATTTGAGCCACAATCGCATTACTGGGGAAGGAGCGAAACTTCTAGCCAAAGCATTACTT
TTTAACGACACCTTGCGGACGCTTAAAATCGGCGATAATCCAATCGATCCTGAGAGCGCA
TATGCACTTCTTCGTGCGATTGCTGACAACGAACGTTCCTCGATGGAAGATTTGGATCTG
ACGGGTATCAATGTGAACGAAGAGTTCAAGTTATTGGCTCAGAAACTGTCGCAGCGCAGT
AGAGCGAGCACAAGCCGCACGAGTTTTCGATACAATGTCAATAGAACAGAAGATATGCGA
ACTGATTTTGATGCATGCGGCCAAGATGCCGACCCAATGGATGTGATACATGATTTTCTC
GAAAAGAAGCGTCTTCGTCTCATCGACCTTTTCCGAAGTTTTGATAAAGATTTAAGCTGG
CGAATTACTCCGTTGGAGTTCAAAAGAGGAATTTTAAATGCAGGCATCAGGTTGAGCAAG
CATCAACTCAGACAACTAATGGCTGACTTGGATATTGACGTAGATGGTCAAGTAAATTAC
AAGGAGTTTAATACCGGAAGAAAAGCAGTTCTACTTCGAAGGCGGGAAGAAAAAAGACGC
AAAGAACTTGAAGAAAAGCTAAAACGGGCTGAAAAGGAAAGATTTCTCGATGACTGGAAA
GACGCAATGAGAAAAACGCGTTCTCCCGCCCAAAGTCCACGGGAATCACCGATCTATTCC
CCGCACAGCAGTCGACCATCCACCGGTAAAGCTTCACCCAGAATAGACAGAGGTTCAAAC
TTCAATGTCGAAGACAAAAACCATTCGTCCGGACCTACATTAAAACCCGACCTCCCCACT
ACAGTCAATCGGAATTTCCCAGTGGGTAGAGACGGCGATTTGGAGAAAAACACCATTTCA
GTTGCCGTCATAAATCGGCCGCGCGAGAGAAGTCCTCTGGAAAGTGCTAAGCGGCAGTCC
GTGCAAAACAAAACATTCCCCGTGAAATATAAGACAAAGCCTGCAATGCTGAAATAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[75-208] 1.8E-25 - T[209-389] 1.1E-39 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[103-120] 0.41 - T[126-148] 0.021 - T[154-173] 1.7 - T[182-204] 0.17 - T[238-260] 0.033 - T[266-288] 2.9E-4 - T[293-316] 2.3E-5 - T[324-343] 0.53 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[413-483] 1.22E-12 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[422-457] 9.827 - T[458-493] 9.743 |
| CDD |
EF_hand_dom (IPR002048) - T[426-483] 2.03338E-9 |
| SMART |
EF_hand_dom (IPR002048) - T[426-454] 30.0 - T[462-490] 0.15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LR74A_HUMAN | 35.909 % | 286 | 1.13E-89 |
| LR74B_HUMAN | 38.017 % | 229 | 4.6E-69 |
| NLRC3_HUMAN | 33.445 % | 143 | 1.52E-35 |