- Transcript 'KH2012:KH.C13.6.v1.A...' >
- Transcript 'KH2012:KH.C3.598.v2....' >
- Transcript 'Boleac.CG.SB_v3.S61....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S61.g12334.01.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S61 [7,400 / 8,972]
Amino acid sequence
Length: 523
>Boleac.CG.SB_v3.S61.g12334.01.p
MSQAEKERFARENHSEIERRRRNKMTTYITELSDMVPSCSALARKPDKLTILRMAVSHMK
QLRGVGTGLDKPAFLTDQELKHLVLESMDGFLFVVSCESARILFVSDTVTTVLNQAHSDW
IGHVLYDLIHPQDVARVQEQLSMDETRHSSYDAKMGFIKKEPSASPPAAPVSDGSRKGFI
CRMRCGKAQVTSAVPRYQRGHVEMVGDNMYAVMRVTGYVRLWPSGGFNESQSGLMDEIGS
QNAIGGEYCLLAIARLHTTTQPSYGELSPLSEHIEFVTRQDLDNVFKYVDKRIVLILGFQ
PHDLIGKRPRDICLXEDADKLIDSYKQVMVMKGQPCTAVCRVQNNNGDHIWFRITSHAFQ
NPYTNEVECIVSNFVVKQGQDDAHIIEHKTPTPYRREQSYSIGSSTERSPDVRSPTATLS
YQPQTIPYTPGHVGQFNPVTGITPGWVSHGENVSDYTQALADRYPVTLSTQHGHAAAVLA
QPTEVFPVEAYHGHENMMAMMIPSSSTSTQGEFTELFTPFSSA
Nucleotide sequence
Length: 1,572
>Boleac.CG.SB_v3.S61.g12334.01.t
ATGTCTCAAGCAGAGAAGGAACGCTTCGCTCGTGAAAATCACTCGGAAATCGAAAGACGT
CGACGTAACAAAATGACGACTTATATCACTGAGTTGTCGGACATGGTACCAAGTTGTAGC
GCTCTTGCTCGTAAACCTGATAAATTGACCATATTAAGAATGGCGGTGTCTCATATGAAA
CAACTCCGTGGAGTCGGCACTGGATTGGATAAACCCGCCTTTTTAACNGACCAAGAACTG
AAACATTTGGTGTTGGAGTCAATGGATGGATTTTTGTTCGTCGTTTCTTGCGAGAGTGCG
AGAATACTATTTGTTTCTGACACCGTCACAACAGTTTTGAACCAAGCTCACTCTGATTGG
ATTGGACATGTACTATATGATTTAATTCATCCACAAGATGTTGCTAGAGTGCAAGAGCAA
TTATCAATGGATGAAACAAGACATTCCAGTTATGATGCAAAAATGGGATTTATCAAAAAG
GAGCCTAGCGCGTCACCACCTGCGGCTCCTGTGTCAGACGGCTCTAGAAAGGGCTTCATC
TGTCGGATGCGATGTGGGAAAGCGCAAGTAACCTCTGCGGTTCCGAGATATCAACGAGGA
CATGTCGAGATGGTNGGCGATAATATGTATGCGGTGATGCGTGTCACAGGATACGTCCGA
CTCTGGCCCTCTGGTGGTTTTAACGAAAGTCAAAGTGGACTTATGGATGAAATTGGGTCT
CAAAACGCCATCGGTGGTGAATATTGTCTTCTTGCGATTGCCAGACTACACACAACAACG
CAACCTTCATACGGTGAACTTTCACCTCTATCCGAGCATATAGAGTTTGTAACCAGACAA
GATTTAGACAACGTTTTCAAGTACGTCGATAAAAGAATTGTGTTAATTCTAGGCTTCCAA
CCTCACGACCTCATCGGAAAACGTCCAAGAGATATATGCTTGNCAGAAGACGCAGACAAG
TTGATTGACAGTTATAAACAAGTGATGGTAATGAAAGGACAACCGTGTACGGCAGTTTGC
CGAGTTCAAAATAACAATGGTGATCATATTTGGTTCCGCATCACTTCGCACGCGTTTCAA
AATCCATATACAAACGAAGTTGAATGTATCGTGTCAAATTTCGTCGTGAAACAAGGTCAA
GACGATGCACATATTATAGAGCATAAAACTCCAACTCCGTATAGGAGAGAACAGTCGTAT
TCGATTGGGTCATCAACCGAGAGATCTCCGGATGTTCGCTCACCGACGGCAACCTTAAGT
TACCAGCCACAAACAATCCCCTACACACCAGGTCATGTCGGTCAATTCAATCCAGTGACC
GGTATCACCCCAGGTTGGGTTTCACACGGTGAAAATGTATCGGATTACACCCAAGCGTTG
GCAGATCGCTACCCAGTAACGCTATCAACTCAACACGGACACGCGGCAGCTGTTCTTGCT
CAACCAACCGAAGTGTTTCCTGTCGAGGCATACCACGGACATGAGAACATGATGGCGATG
ATGATACCAAGCAGCAGCACCTCAACACAGGGAGAATTTACTGAACTTTTCACTCCGTTT
TCCTCCGCATGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[1-65] 1.9E-21 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[6-70] 2.88E-15 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[9-62] 17.06 |
| CDD |
bHLH_dom (IPR011598) - T[11-63] 3.16447E-15 |
| Pfam |
bHLH_dom (IPR011598) - T[11-62] 2.0E-15 |
| SMART |
bHLH_dom (IPR011598) - T[15-68] 6.9E-14 |
| PRINTS |
Nuc_translocat (IPR001067) - T[24-39] 9.8E-53 - T[70-93] 9.8E-53 - T[95-114] 9.8E-53 - T[127-145] 9.8E-53 - T[173-186] 9.8E-53 - T[210-229] 9.8E-53 - T[275-292] 9.8E-53 |
| ProSiteProfiles |
PAS (IPR000014) - T[77-141] 12.292 - T[281-332] 9.588 |
| SMART |
PAS (IPR000014) - T[79-146] 1.7E-8 - T[264-330] 0.63 |
| Pfam |
PAS_fold (IPR013767) - T[83-185] 6.5E-8 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[88-143] 3.49E-10 - T[275-374] 1.05E-17 |
| CDD |
PAS (IPR000014) - T[88-161] 5.69209E-9 - T[274-372] 2.03921E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 48.312 % | 369 | 1.86E-119 |
| ARNT2_HUMAN | 46.702 % | 352 | 1.98E-113 |
| BMAL1_HUMAN | 38.677 % | 260 | 1.39E-79 |