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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S631...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S631.g12608.01.t

Possible name(s)

AC004223.3; RFFL; RNF34

Location

S631 [22,613 / 24,900]

Sequences

Amino acid sequence

Length: 314

>Boleac.CG.SB_v3.S631.g12608.01.p
MPCLYCNASFSIIKWKKKCDFCTHQFCTNCIVQKRCVACANVXNCQWIYESLMKVKTKDL
KLYLSVRGTPVHLYTEKTELVRLVLLKEHSKGNFGSRTSRPIPHQSSQNPTQAHLEAQLL
SGDQGSSTQSNRHANSQQETXQLRTEEQSEFLNVARNAPVLSTTIPESTQNRQVGEAADI
KSPNQIELLTTRELKQILFDNFIDYKGCVEKIELQTRVHNLYNDKAKQDSEKHATDDSDL
CKICWDGAIDCVLLDCGHMATCTSCGKRLNECPICRQFIVRCVHKSTSRSQYSTTSWGKN
DGPDEENDGDEQEE

Nucleotide sequence

Length: 945

>Boleac.CG.SB_v3.S631.g12608.01.t
ATGCCATGTCTGTACTGCAACGCAAGTTTTTCAATTATCAAGTGGAAGAAAAAGTGTGAT
TTCTGCACCCATCAATTTTGTACGAACTGCATTGTNCAGAAGCGTTGTGTAGCTTGTGCA
AATGTGNTGAATTGTCAATGGATATATGAAAGCCTAATGAAAGTTAAAACTAAAGACCTT
AAACTATATCTTTCTGTTCGAGGCACTCCTGTACATCTGTATACTGAAAAGACTGAGCTA
GTTCGACTAGTGCTTTTGAAAGAACACTCAAAAGGAAATTTTGGCTCACGGACCAGTAGG
CCTATTCCACATCAATCCAGCCAAAATCCCACTCAAGCACATCTTGAAGCACAACTGTTA
TCAGGTGATCAAGGTTCTAGCACTCAGTCAAATAGGCATGCAAATTCTCAACAAGAAACA
CANCAGTTGAGGACTGAAGAACAGTCAGAATTTTTGAATGTTGCAAGAAATGCACCAGTT
CTATCCACTACAATTCCCGAAAGTACGCAGAACAGACAAGTGGGAGAAGCAGCTGATATA
AAATCACCCAATCAAATAGAACTCCTGACGACGCGTGAGCTGAAACAAATCCTCTTCGAC
AATTTTATCGATTACAAAGGTTGCGTTGAAAAAATTGAACTGCAAACAAGAGTTCATAAC
TTATATAATGACAAAGCCAAGCAAGATTCTGAGAAACATGCAACTGATGACAGTGACCTT
TGCAAGATTTGCTGGGATGGAGCTATAGACTGTGTGCTTTTAGACTGTGGACACATGGCA
ACGTGTACATCTTGTGGAAAGAGGTTGAATGAGTGCCCAATCTGTCGCCAGTTTATTGTT
CGTTGTGTTCACAAATCCACATCCCGATCGCAATATTCAACAACTTCCTGGGGGAAAAAT
GACGGTCCAGATGAGGAGAACGACGGAGACGAACAGGAAGAATAA

InterProScan

SMART
Znf_RING (IPR001841) - T[3-39] 2.6 - T[241-275] 0.0015
ProSitePatterns
Znf_RING_CS (IPR017907) - T[22-31] .
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[217-284] 3.0E-15
ProSiteProfiles
Znf_RING (IPR001841) - T[241-276] 10.955

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFFL_HUMAN 37.618 % 163 1.4E-47
RNF34_HUMAN 32.143 % 155 2.41E-44