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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'Cisavi.CG.ENS81.R2.7...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Clone 'cima813259' > 
  5. Transcript 'Boleac.CG.SB_v3.S64....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S64.g12699.01.t

Possible name(s)

AL021546.1; COX6A1; COX6A2

Gene model

Boleac.CG.SB_v3.S64.g12699

Location

S64 [312,286 / 313,835]

Sequences

Amino acid sequence

Length: 104

>Boleac.CG.SB_v3.S64.g12699.01.p
MRSLLAKKLFQPLLSRGMASAEAHSGPDVWKLATFIFVPIWVGGTGVFVYLREKEHQAHH
VRPEHKEYAHLGIRTKAFPWRDGNKSLFHNPHANPLPGVGYEED

Nucleotide sequence

Length: 433

>Boleac.CG.SB_v3.S64.g12699.01.t
TTATCTACAGAATTTCCTACTAGAAATTNAACAAGAATGCGTTCTTTGTTGGCGAAAAAG
CTTTTTCAACCCCTCCTTTCAAGGGGAATGGCAAGTGCAGAAGCTCATAGTGGGCCAGAT
GTATGGAAACTGGCCACTTTCATCTTTGTACCAATTTGGGTAGGGGGCACTGGGGTTTTC
GTTTATCTCCGAGAGAAAGAGCATCAGGCCCATCACGTCCGGCCAGAGCATAAAGAATAT
GCACACTTGGGAATTCGTACCAAGGCTTTCCCGTGGAGAGATGGAAACAAATCGTTATTC
CACAACCCACACGCAAACCCATTGCCTGGAGTTGGTTACGAAGAAGACTGATTTTTTTCA
ATGCGATTTTTCTCTAGTTGTCGAATTCGATTTCAAGACTTGAAATTATTAAAGTGCGTG
TCGTATCCTGTAA

InterProScan

PIRSF
Cyt_c_oxidase_su6a (IPR001349) - T[3-103] 5.7E-21
PANTHER
Cyt_c_oxidase_su6a (IPR001349) - T[15-103] 5.6E-24
Gene3D
Cyt_c_oxidase_su6a_sf (IPR036418) - T[17-104] 6.0E-25
Pfam
Cyt_c_oxidase_su6a (IPR001349) - T[21-94] 1.3E-13
SUPERFAMILY
Cyt_c_oxidase_su6a_sf (IPR036418) - T[21-98] 6.67E-21
ProDom
Cyt_c_oxidase_su6a (IPR001349) - T[26-102] 2.0E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CX6A1_HUMAN 46.875 % 76.6 1.23E-19
CX6A2_HUMAN 48.649 % 67 5.18E-16