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TRANSCRIPT CARD

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  1. Region 'REG00001402'
  2. Transcript 'Boleac.CG.SB_v3.S659...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S659.g12848.01.t

Possible name(s)

RPS3

Location

S659 [67,171 / 71,202]

Sequences

Amino acid sequence

Length: 297

>Boleac.CG.SB_v3.S659.g12848.01.p
MLNISFIDKCIGVCHEWKPYIKLHLKYFEPYNNLLVMAAQISKKRKFVRDGLFKAELNQL
LWRELAEDGYSGVEVRVTPSRTEXIIMATRTQNVLGEKGRRIRELTAMVQKRFNFPDGAV
ELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG
QRAKAMKFVDGLMIHSGNPVREYVDTAVRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL
PDNVSIVEPKEEDEISGPKSESKTPKPEPVPQVPQGMGQQPMPPMPPVVSQMGGPSM

Nucleotide sequence

Length: 921

>Boleac.CG.SB_v3.S659.g12848.01.t
ATGTTGAATATAAGTTTTATTGATAAGTGTATTGGAGTTTGCCATGAATGGAAACCATAC
ATCAAACTTCATTTAAAATATTTTGAGCCATACAATAACTTGCTGGTGATGGCAGCGCAG
ATATCAAAAAAGCGCAAGTTCGTTAGAGACGGCCTTTTCAAGGCTGAGCTTAATCAGCTC
CTNTGGAGAGAATTGGCTGAAGATGGCTACAGTGGCGTCGAAGTCCGTGTCACTCCATCT
CGTACTGAGATNATCATCATGGCAACGAGGACGCAGAACGTTCTCGGTGAGAAAGGCCGA
CGCATCCGTGAACTGACAGCAATGGTGCAGAAGCGTTTCAACTTTCCAGATGGCGCCGTT
GAGTTGTATGCCGAAAAAGTTGCCAATCGTGGTCTCTGTGCGACAGCTCAGTGTGAGTCT
CTCCGTTACAAGCTTCTCGGTGGCCTTGCTGTCAGACGTGCCTGCTATGGTGTCCTTCGA
TTCATCATGGAATCTGGAGCTAAGGGCTGTGAAGTTGTGGTGTCTGGAAAGTTGAGAGGT
CAAAGAGCTAAGGCCATGAAATTTGTTGACGGTTTGATGATCCACAGTGGTAACCCGGTC
CGGGAATACGTCGACACTGCTGTGAGACACGTACTTTTGAGACAAGGCGTTCTTGGAATC
AAGGTCAAGATTATGCTTCCTTGGGATCCCAATGGCAAAATTGGTCCCAAGAAGCCCCTC
CCTGATAATGTCAGCATCGTCGAACCTAAAGAGGAGGATGAAATCAGTGGACCCAAATCG
GAATCAAAGACCCCAAAACCAGAACCAGTCCCACAAGTACCACAGGGTATGGGGCAACAA
CCAATGCCACCCATGCCTCCTGTGGTGTCACAAATGGGAGGCCCATCCATGTGATGCAAG
AATAAATCTATTTGAGGAAAA

InterProScan

Gene3D
KH_dom-like_a/b (IPR015946) - T[35-127] 1.1E-43
TIGRFAM
Ribosomal_S3_euk/arc (IPR005703) - T[44-248] 9.9E-69
SUPERFAMILY
KH_sf_prok-type (IPR009019) - T[46-135] 2.83E-23
ProSiteProfiles
KH_dom_type_2 (IPR004044) - T[57-128] 10.628
Pfam
KH_dom_type_2 (IPR004044) - T[58-129] 1.7E-9
SUPERFAMILY
Ribosomal_S3_C_sf (IPR036419) - T[129-228] 1.7E-27
Gene3D
Ribosomal_S3_C_sf (IPR036419) - T[129-272] 3.9E-71
Pfam
Ribosomal_S3_C (IPR001351) - T[142-224] 3.2E-23
ProSitePatterns
Ribosomal_S3_CS (IPR018280) - T[183-219] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3_HUMAN 85.356 % 406 7.53E-145