- Transcript 'Boleac.CG.SB_v3.S682...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S682.g13096.01.t
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
S682 [49,011 / 50,643]
Amino acid sequence
Length: 543
>Boleac.CG.SB_v3.S682.g13096.01.p
LFLSGKSEVQSRKQDYIEDLMQGIGMLNPSSELMNGARYSYQSAYAATSIPGTYASGTAG
AAAMQLPVYTNQSPSLNQGFATGGLNYVNHPGIGHSGAVVPQLSTGMGATALQAQYPSMT
PNIAINPNMGVVPGALPGPPRQDKAYRRNYTHAKPPYSYISLITMAIQSSESKMMTLSEI
YGWIMXLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFEN
GCYLRRQKRFKCEKKAAIKAAQRKHGDPDDDDDPDAQVPMMDVTKQELLGEHPPEQINMV
NGVEGVETKPSFETLHPASSDSNMAVAPSDEHKDQNVSAXXAAGXQQQRDXLDRRVTQNG
GPAEVANMLPPPHHVIQAYPGYPGTHHFLPQPSFALAGDPSGFGTQYAQMSTATAVKTDP
QSFAHPFSINSLVGDQHRRDLHAYQEAAMQYYPMQSLPHVSVPNSGFQSSVVTQHHNSQS
PVSSAQPHNQPTMTTQQLETVNLSNINGDRTVMTGMVPPPEAYYPVPVTSMPSHIPETSG
TVQ
Nucleotide sequence
Length: 1,632
>Boleac.CG.SB_v3.S682.g13096.01.t
CTGTTTTTATCCGGCAAGTCAGAAGTTCAGAGCAGAAAGCAAGACTACATTGAAGATCTA
ATGCAAGGAATCGGGATGCTTAACCCATCGAGTGAACTTATGAATGGCGCACGGTATTCA
TACCAAAGCGCGTACGCTGCGACAAGCATACCTGGCACGTATGCAAGTGGAACAGCAGGT
GCTGCTGCCATGCAGTTACCAGTTTATACGAATCAGTCGCCGAGTTTAAATCAAGGATTT
GCTACAGGAGGATTAAATTATGTAAATCACCCTGGAATTGGACATTCAGGAGCTGTAGTG
CCACAGCTTTCTACAGGCATGGGAGCTACGGCTTTGCAAGCTCAATATCCCTCAATGACG
CCAAATATCGCTATAAATCCAAACATGGGGGTGGTACCTGGTGCGCTTCCTGGACCACCG
AGACAGGATAAAGCTTACAGAAGGAATTATACCCACGCTAAGCCTCCGTATAGCTATATA
TCCTTGATTACCATGGCTATTCAATCAAGCGAAAGCAAGATGATGACTTTGAGCGAGATT
TACGGGTGGATTATGGANCTGTTCCCGTTTTACCGTCAAAATCAACAGCGATGGCAAAAT
TCAATTCGGCATAGTCTGTCATTCAATGATTGTTTTGTAAAAGTACCAAGATCTCCAGAT
AAACCCGGTAAAGGGTCTTACTGGTCACTTCATCCAGATGCAGGAAATATGTTTGAAAAT
GGATGCTACCTTCGCCGACAAAAACGATTCAAATGTGAAAAGAAGGCAGCAATTAAGGCC
GCNCAACGAAAGCATGGGGACCCCGATGATGATGATGATCCAGATGCACAAGTACCAATG
ATGGACGTTACTAAACAGGAACTTTTAGGAGAGCATCCGCCAGAACAAATAAATATGGTA
AACGGCGTTGAAGGAGTCGAAACAAAGCCTTCTTTTGAGACACTACATCCGGCGTCATCT
GATTCAAACATGGCGGTGGCCCCGTCCGATGAACATAAGGACCAAAACGTTTCTGCTGNN
NCAGCGGCGGGTNCGCAACAGCAAAGGGACNTATTAGATCGCAGAGTTACTCAAAATGGG
GGTCCCGCAGAAGTAGCCAACATGCTCCCTCCCCCACATCATGTAATTCAAGCATACCCT
GGCTACCCGGGTACACATCACTTCCTTCCNCAACCAAGTTTTGCTTTAGCTGGTGACCCA
TCTGGATTTGGTACTCAGTATGCTCAAATGTCAACCGCTACAGCTGTAAAAACAGACCCG
CAATCGTTCGCGCACCCATTCTCTATAAACAGTTTAGTAGGAGACCAACATCGACGTGAT
TTGCATGCATATCAAGAAGCCGCTATGCAATATTATCCAATGCAGAGTCTACCGCATGTA
TCAGTTCCTAATTCTGGGTTCCAATCCTCTGTTGTTACGCAACATCATAATTCACAGTCT
CCCGTGTCTTCCGCGCAACCGCACAACCAGCCTACCATGACAACACAACAATTAGAAACG
GTGAATCTTTCCAATATAAATGGGGATAGAACGGTTATGACTGGGATGGTTCCCCCTCCA
GAAGCATATTATCCCGTCCCTGTTACTTCAATGCCATCCCACATACCAGAGACTAGCGGC
ACCGTGCAATGA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[152-253] 6.6E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[152-242] 4.3E-59 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[153-248] 2.0E-39 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[154-167] . |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[154-248] 38.616 |
| CDD |
Fork_head_dom (IPR001766) - T[154-231] 1.87463E-50 |
| PRINTS |
Fork_head_dom (IPR001766) - T[154-167] 1.2E-22 - T[175-192] 1.2E-22 - T[198-215] 1.2E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[154-238] 6.5E-37 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[198-204] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[425-482] 1.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 82.301 % | 211 | 2.31E-63 |
| FOXA2_HUMAN | 85.714 % | 236 | 1.0E-71 |
| FOXA1_HUMAN | 67.073 % | 228 | 1.86E-68 |