- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C6.158.v1....' >
- Clone 'cima879617' >
- Transcript 'KH2012:KH.L96.81.v1....' >
- Transcript 'Boleac.CG.SB_v3.S69....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S69.g13174.01.t
Possible name(s)
Boleac.CG.SB_v3.S69.g13174
Gene model
Location
S69 [248,659 / 256,427]
Amino acid sequence
Length: 1,210
>Boleac.CG.SB_v3.S69.g13174.01.p
MRRRSARNADAAIKGTGKKSAGKTSDVHECNWVEGRKTDTCSEVCPSPKELFEHVSQEHV
SRGPKGFFCKWSGCGKRRKVVYVTLDSLQKHLKTHIYDETDRGDTLEDLDDELNGKNDEK
NEHNSESDEEEEGEEEEDEEEEDEEEEDEDEDEDEEEEEEEQYSSKSEGASKKRKPTSTI
KGKAKVQKVDTAAKNKNSASSDKSKPSAAAFDPSGFFYRFMCEWNVDASLYGMDTSISRY
VKCKRKFKKYPEALDHLRNHHIQKLAAQDDPSFKCSWENCDSEEFPDADDLKEHVMVHAK
AKGHRGADSSRNKCKCKWMISAKTNTACSEIFPTTDRLFQHVTTQHVSCGPKGYSCKWAQ
CGIRTVFTCINEEELQKHIRSHIFSSSAKDHRSSDSNQRVSDEATDDESSEDCTDDGDDD
YDFAADANARKAKRLMNKRKNNVVDANRSKIRKASDNSSTGKTFHSGPKSNITSDKPNTT
TIKLADTSSFFYKFTCEWYASAAQYGVDSAMSKPIKCKRKFSRLNEAIEHLQTHHIRKLV
SNDEPFRCAWQDCDSGEFSDEESIKEHVMYHARGDNTPLIQNGKGTATESGGKSIKKDSG
VTWYTAALHSLLSCDISLPTVDPCNNNTCYFCRYSSLQSSVEKLGSTSSTILSEFRDLLP
KFEGYKDNPYKFISNLVALAAVHEETHHKSXILQDLFWVEDINDSDYKCQXHFDKDLASF
FSALYKKCNVCSRNSKSWPTAEMRYVIFGWDASNSKTISPVIYVKGREYQLKSVLGRDSK
TGTFYSGTCNHGNEWTMFRGDVLKATECDKVLKLKGACMAIYAASYEPLMPITADIPEST
GIPSDNIDSRPPSPAPRPLSPPAHPVCPEPDVLQQEWTAGNNMKTGQEYSPVNFPPVPCI
IPKSAVEFSICCRRGGDFDAILSQRKLKNMNGVGSCINAVIQALLTTGLSVIVTKLCELD
IGCFLCRLLSVSQHIFTSKGKITEPIELELGRTVLGAPEKAEGNPVECIKRLAQRMASDE
QTKHRSNDAKYKMMIRFQRNCPCRESYEALHWTVNPSKQHESLNDLMAQHSLYCEKCNSV
NLTEAVQLPEILIITVESDGRDYSLHYPDEMPTRSSRYFLSAVIVSDDNGSHFSTYGRVF
GKWLLYNDSNEARKFSSGDVLHLQTNVRVLLYVTKELTPNDVRLSLAKAKELKDSVKHKP
IVTVKEERHQ
Nucleotide sequence
Length: 3,680
>Boleac.CG.SB_v3.S69.g13174.01.t
TTGTTACAGGCGTAACCTACTGATAGACTTGCTATTGTACTCTGAAAATGAGACGGCGAA
GCGCTAGAAATGCTGATGCAGCCATTAAAGGCACTGGTAAGAAGAGTGCTGGCAAAACGT
CAGATGTCCATGAGTGCAACTGGGTCGAAGGCAGGAAGACTGATACTTGTTCCGAAGTCT
GTCCTTCACCTAAAGAGTTGTTTGAGCATGTTTCACAGGAGCATGTAAGTCGTGGTCCAA
AAGGTTTCTTTTGCAAATGGTCCGGCTGTGGAAAAAGGAGAAAAGTTGTTTACGTTACCC
TGGATTCTTTGCAGAAACATCTCAAAACTCACATCTATGATGAGACTGACCGGGGNGACA
CATTGGAAGATTTGGATGATGAGTTGAATGGTAAAAATGATGAAAAAAATGAACATAACA
GTGAAAGTGATGAAGAAGAGGAGGGTGAAGAAGAAGAGGATGAGGAAGAAGAAGATGAAG
AGGAGGAAGATGAAGATGAAGATGAGGATGAGGAAGAGGAAGAAGAAGAACAATATTCAT
CCAAGAGTGAAGGTGCATCAAAGAAACGAAAACCCACAAGCACTATCAAAGGGAAAGCCA
AAGTCCAGAAAGTTGATACTGCTGCTAAAAATAAAAACAGTGCTTCATCAGACAAGAGTA
AACCATCAGCTGCAGCTTTTGATCCATCAGGGTTCTTCTATCGCTTCATGTGTGAGTGGA
ATGTTGATGCATCCCTGTATGGGATGGATACATCGATTTCAAGATATGTGAAGTGTAAAA
GGAAGTTCAAGAAATATCCTGAAGCTTTGGATCACCTGCGCAACCACCATATTCAGAAGT
TGGCTGCGCAGGATGATCCATCCTTCAAATGCTCATGGGAAAACTGCGATAGTGAGGAAT
TTCCTGATGCTGATGACCTGAAAGAGCACGTCATGGTGCATGCAAAAGCGAAAGGCCACA
GGGGAGCAGATTCATCTAGAAACAAATGTAAATGCAAATGGATGATCTCGGCAAAAACTA
ATACAGCATGCTCAGAAATCTTTCCGACAACTGACAGATTGTTTCAGCATGTCACAACAC
AGCACGTCTCATGTGGTCCTAAGGGATACAGTTGCAAATGGGCTCAATGCGGAATTCGCA
CTGTTTTCACATGTATTAATGAAGAAGAACTTCAGAAACACATCAGGTCCCACATATTCA
GCAGCTCAGCGAAAGATCACCGCTCATCCGACTCGAACCAAAGAGTGTCTGACGAAGCTA
CTGATGATGAAAGCTCGGAAGACTGTACCGATGATGGCGATGATGATTATGATTTCGCTG
CTGATGCAAATGCTCGAAAAGCAAAAAGATTGATGAATAAGAGGAAAAACAATGTTGTTG
ATGCAAACCGATCTAAAATCCGCAAGGCATCCGATAATTCTTCAACAGGAAAAACATTTC
ACAGTGGACCTAAAAGCAATATCACATCGGATAAACCCAACACTACAACAATTAAATTGG
CTGACACTTCGAGCTTTTTCTACAAATTTACATGTGAATGGTACGCCAGCGCTGCACAGT
ATGGAGTAGATTCTGCCATGTCAAAACCCATCAAGTGCAAAAGGAAATTTAGTCGTTTGA
ATGAGGCTATAGAGCACTTGCAAACACATCACATTCGCAAGCTGGTCAGTAACGACGAAC
CATTTCGGTGTGCCTGGCAAGACTGTGACAGTGGGGAATTTTCTGATGAAGAAAGTATCA
AGGAGCATGTTATGTATCACGCCAGAGGAGATAATACTCCACTGATCCAGAATGGTAAAG
GTACTGCCACAGAGTCTGGTGGAAAATCGATCAAGAAAGATTCCGGTGTTACATGGTACA
CTGCTGCTTTGCATTCATTACTCAGTTGCGACATATCGTTGCCCACCGTTGATCCGTGCA
ACAATAACACATGCTACTTTTGCCGGTATTCATCTTTGCAAAGTAGTGTGGAGAAGCTCG
GCTCTACTTCATCCACGATCTTGAGTGAATTCAGAGATTTGCTTCCGAAATTCGAAGGTT
ACAAGGATAACCCGTATAAATTCATCTCAAACTTGGTTGCTTTGGCTGCTGTACATGAGG
AAACACATCACAAAAGCGNTATCTTACAAGATTTGTTTTGGGTTGAAGACATCAATGATA
GCGACTACAAGTGTCAAANACATTTCGATAAAGATTTGGCTAGTTTTTTCTCAGCCTTAT
ACAAGAAGTGCAATGTTTGTTCACGGAACTCCAAATCGTGGCCAACAGCCGAGATGCGAT
ATGTCATCTTTGGTTGGGACGCTTCAAATTCAAAAACTATTTCTCCTGTAATATATGTGA
AAGGACGAGAATATCAGTTAAAATCAGTATTGGGACGTGATTCCAAAACTGGTACCTTCT
ATTCAGGCACTTGCAATCATGGCAATGAATGGACCATGTTTCGTGGTGACGTTTTAAAAG
CTACGGAGTGTGATAAAGTACTAAAGTTGAAAGGTGCATGTATGGCAATTTATGCTGCCT
CTTATGAACCTTTGATGCCCATTACTGCTGACATACCTGAAAGTACAGGTATTCCAAGTG
ACAATATCGATTCACGTCCTCCCTCGCCTGCACCACGTCCGCTTTCACCTCCAGCACATC
CTGTCTGTCCCGAACCTGATGTGCTTCAACAAGAATGGACCGCAGGAAATAATATGAAGA
CTGGCCAGGAGTATTCACCAGTAAATTTTCCACCGGTTCCATGCATCATCCCAAAGTCTG
CCGTGGAATTCAGTATCTGCTGCAGAAGAGGTGGAGATTTTGACGCAATACTTTCACAGA
GAAAGTTGAAGAACATGAACGGTGTTGGATCGTGTATAAATGCAGTCATTCAGGCTTTGT
TGACCACAGGATTGTCCGTGATAGTGACAAAACTATGTGAATTAGACATAGGTTGCTTTC
TATGTCGGCTCTTGTCAGTTTCTCAGCACATTTTCACCAGTAAAGGGAAAATAACAGAAC
CGATCGAATTGGAGTTGGGTAGGACAGTACTAGGCGCCCCTGAAAAAGCTGAGGGTAACC
CAGTTGAATGCATCAAACGACTAGCACAGAGAATGGCTTCTGATGAGCAGACAAAACATA
GGTCGAACGACGCAAAATACAAGATGATGATAAGGTTTCAGAGAAATTGTCCTTGCAGGG
AGAGCTATGAAGCACTTCATTGGACAGTCAACCCATCGAAGCAGCATGAAAGTTTGAATG
ATCTCATGGCACAGCATTCTTTATACTGTGAAAAATGCAACAGCGTGAATCTCACGGAAG
CCGTTCAGCTACCAGAGATCTTGATCATTACAGTCGAGTCTGACGGCCGAGATTACTCTT
TGCATTATCCAGATGAAATGCCCACTCGTAGTTCGCGCTATTTTCTATCTGCTGTCATTG
TGTCTGATGATAATGGTTCACATTTCTCGACCTATGGCCGAGTTTTTGGAAAATGGTTGC
TTTATAATGATAGCAATGAAGCGCGTAAGTTTTCGTCTGGAGATGTTTTGCATTTACAGA
CAAATGTAAGAGTGCTGCTGTATGTTACAAAGGAGTTGACTCCAAATGATGTGCGTTTAT
CTTTGGCAAAGGCTAAAGAATTGAAAGACAGTGTTAAGCACAAGCCCATTGTAACTGTCA
AAGAAGAGAGGCACCAGTGA
| SMART |
Znf_C2H2_type (IPR013087) - T[28-59] 79.0 - T[67-95] 0.22 - T[238-260] 100.0 - T[273-298] 0.015 - T[326-346] 210.0 - T[354-382] 0.075 - T[515-534] 240.0 - T[546-571] 4.8 |
| Protein Name | Identity | Bit Score | e-value |
|---|