- Transcript 'KH2012:KH.C1.1014.v1...' >
- Transcript 'KH2012:KH.C5.42.v2.A...' >
- Clone 'cien53059' >
- Transcript 'KH2012:KH.C5.298.v5....' >
- Transcript 'Boleac.CG.SB_v3.S708...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S708.g13419.01.t
Possible name(s)
PSPH; VPS37B; VPS37C
Gene model
Location
S708 [33,708 / 35,608]
Amino acid sequence
Length: 467
>Boleac.CG.SB_v3.S708.g13419.01.p
MAKTKXQVIEVLRKADAVCFDVDSTICTDEGIDELASFLGVGDEVKQLTKKAMDGGITFQ
EALNERIKIINPTHIRLKTFLESRTPTPTPGAKELIDALRARGAYIYLISGGFVSIINPT
AKLIGIPREDIRANRFLYYYTGQCVGADEKLPTCRSGGKAEVISQLRKEHGYKNIVLIGD
GATDLEACPPADAFIGFGGNVVRDLVKEKASWFVYSFQEIRDVLSCISSNMDYDFMILID
DLSMDELNQLMEDETKLNEVVMDDDRLKKMKLDREMVLAENRSIADDNLGKEPQLLQMKN
DLGLKYNKLKELHELYQMNRGKMASLSKEDNLDAMLAVLQAKLAETEENTEALAERLYNK
GIKAEDFVSEFKQIRKDAHTRRAKVDKMRELILDMRRREVHDPPTQPALRGSRHGSFPSS
AAHPPSGDLPYPPAGGYPPHGMHQSSSFPQTHQAYPASQQYQQYQWR
Nucleotide sequence
Length: 1,404
>Boleac.CG.SB_v3.S708.g13419.01.t
ATGGCGAAAACAAAGGNACAGGTTATTGAGGTGTTAAGGAAAGCAGATGCTGTCTGTTTT
GATGTCGATAGTACAATATGCACAGATGAAGGAATTGACGAACTGGCAAGTTTTTTGGGA
GTCGGGGATGAAGTAAAACAACTCACCAAAAAGGCAATGGATGGCGGGATAACTTTTCAG
GAAGCACTGAATGAAAGGATCAAAATTATTAACCCGACCCATATTCGACTGAAAACGTTT
CTGGAATCCAGAACCCCTACGCCAACTCCAGGAGCTAAAGAGCTGATTGATGCCCTCCGC
GCTCGCGGCGCTTACATCTATCTGATTTCGGGAGGATTCGTGTCGATAATAAATCCGACA
GCTAAGCTAATCGGGATTCCTCGAGAAGACATCAGAGCCAACCGCTTCTTATACTATTAC
ACTGGGCAGTGTGTTGGAGCAGATGAAAAGCTCCCCACATGTAGATCTGGTGGAAAAGCT
GAAGTAATTTCTCAATTACGTAAAGAACATGGTTATAAAAACATAGTTTTGATTGGAGAT
GGTGCTACAGATCTAGAAGCCTGTCCACCTGCTGACGCATTTATTGGTTTTGGTGGCAAT
GTTGTCAGAGATCTTGTTAAGGAGAAGGCCAGTTGGTTTGTCTACTCTTTCCAAGAAATT
CGTGATGTTCTATCTTGCATTAGCTCGAACATGGATTATGATTTTATGATACTAATCGAT
GATTTGTCTATGGATGAGCTGAATCAGTTGATGGAAGATGAAACCAAATTGAATGAAGTT
GTAATGGACGATGATAGGTTGAAAAAAATGAAATTAGACAGAGAAATGGTCCTGGCCGAA
AATCGCAGCATTGCTGATGATAATTTAGGCAAAGAGCCCCAGCTGCTGCAAATGAAAAAT
GACCTTGGATTAAAGTATAACAAATTGAAGGAGCTTCATGAACTGTACCAGATGAATAGA
GGCAAAATGGCTTCATTGTCCAAAGAAGACAACTTGGACGCNATGTTAGCAGTCTTACAA
GCCAAGCTTGCAGAAACCGAAGAAAACACAGAAGCTTTGGCTGAGAGATTGTATAATAAA
GGCATCAAAGCAGAAGACTTTGTATCAGAGTTTAAACAAATTCGTAAAGATGCACATACA
AGAAGAGCTAAAGTAGACAAAATGAGAGAATTAATCCTTGACATGAGAAGAAGGGAGGTT
CACGATCCTCCTACCCAACCTGCACTTCGAGGAAGCAGACATGGATCGTTTCCATCATCA
GCAGCACATCCCCCTTCAGGTGATCTACCATATCCCCCAGCTGGTGGCTACCCACCTCAC
GGCATGCACCAGTCATCGTCATTTCCTCAAACACATCAAGCCTACCCAGCTTCCCAGCAA
TATCAGCAGTACCAGTGGCGGTGA
| SUPERFAMILY |
HAD-like_sf (IPR036412) - T[8-224] 9.47E-49 |
| Gene3D |
HAD_sf (IPR023214) - T[17-30] 4.2E-67 - T[82-135] 4.2E-67 - T[148-214] 4.2E-67 |
| Gene3D |
Pser_Pase_dom_2 (IPR023190) - T[31-81] 4.2E-67 - T[136-147] 4.2E-67 |
| Pfam |
Mod_r (IPR009851) - T[241-384] 5.6E-31 |
| ProSiteProfiles |
Mod_r (IPR009851) - T[313-402] 16.521 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SERB_HUMAN | 47.867 % | 223 | 1.67E-70 |
| VP37B_HUMAN | 37.186 % | 122 | 9.54E-32 |
| VP37C_HUMAN | 29.193 % | 89.7 | 1.37E-19 |