Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S724.g13603.01.t

Possible name(s)

F5; F8; MFGE8

Gene model

Boleac.CG.SB_v3.S724.g13603

Location

S724 [5,441 / 7,506]

Sequences

Amino acid sequence

Length: 253

>Boleac.CG.SB_v3.S724.g13603.01.p
MYCVVFLCCLALIESSSASKCGVTDFLEQLIQSVQTIQQNGHQCGSLSEPLVGKAGPVGP
RGPRGPPGEVDMVSVEQMIRRMIDESVDNLRAAGGLCYMGIKSGLIPNSAITARSFYGDR
HEPFQARLDNRASSSSTGSWSSKRNEAGEWLQVDFGSVKQVAGVITQGRPQASQWVTTYK
VSCGTSQNNMVFVSDNGLEKVFDGNYNPDTKIYNRFPAVLSCRFIRIHPQAYSDYMSMRV
EFVPGACFNRSLF

Nucleotide sequence

Length: 883

>Boleac.CG.SB_v3.S724.g13603.01.t
ATGTATTGTGTAGTATTTCTCTGCTGCCTGGCTTTAATCGAGTCGTCATCCGCTAGTAAA
TGTGGCGTGACTGACTTTCTCGAGCAACTCATCCAATCAGTACAAACGATACAACAAAAC
GGACATCAATGCGGCTCATTGTCAGAACCCCTGGTTGGGAAGGCCGGTCCGGTAGGACCT
CGGGGGCCAAGAGGTCCACCTGGTGAAGTGGACATGGTTTCTGTCGAACAAATGATTCGA
CGAATGATAGACGAAAGTGTGGACAATTTGCGCGCGGCCGGTGGATTGTGCTACATGGGA
ATAAAATCGGGTCTTATACCCAACTCGGCAATTACTGCCCGCTCTTTCTATGGCGATCGT
CATGAACCTTTTCAGGCTCGACTCGACAATCGGGCTTCATCCTCGTCCACCGGATCTTGG
TCTTCAAAAAGAAATGAAGCTGGCGAGTGGCTGCAGGTTGACTTTGGAAGTGTAAAGCAG
GTTGCGGGAGTAATAACGCAAGGAAGACCACAAGCCAGCCAATGGGTTACAACCTACAAA
GTATCTTGCGGCACAAGTCAAAACAACATGGTGTTCGTTTCAGATAATGGACTGGAAAAG
GTGTTCGACGGAAATTACAATCCTGATACAAAGATCTACAATCGTTTCCCAGCAGTTCTA
TCATGCAGATTCATTCGGATTCATCCGCAAGCTTATAGTGACTACATGTCCATGCGGGTT
GAATTCGTGCCAGGGGCTTGCTTCAATAGATCCCTGTTCTAAGCAATTCGACAGTTTGTC
CAGATTCTACAATGTCGATTTATTTGTACGGAATATATACGAAAGACCCTTGTAACAAGA
AGAATGTTTGTAGGAGGCAGCGAGCTGGTTGGTGCGGTTGGGC

InterProScan

ProSiteProfiles	FA58C (IPR000421) - T[93-245] 28.327
SMART	FA58C (IPR000421) - T[96-247] 1.8E-5
Gene3D	Galactose-bd-like_sf (IPR008979) - T[96-246] 3.4E-43
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[99-242] 3.33E-38
Pfam	FA58C (IPR000421) - T[111-242] 6.2E-23
ProSitePatterns	FA58C (IPR000421) - T[139-168] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MFGM_HUMAN	32.258 %	78.2	1.08E-16
CPXM2_HUMAN	35.455 %	76.3	9.35E-16
FA5_HUMAN	28.947 %	79.7	6.39E-17