- Transcript 'KH2012:KH.S1171.1.v1...' >
- Transcript 'Boleac.CG.SB_v3.S72....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S72.g13547.01.t
Possible name(s)
ASH1L; PHF20; PHF20L1
Gene model
Location
S72 [76,627 / 86,960]
Amino acid sequence
Length: 1,335
>Boleac.CG.SB_v3.S72.g13547.01.p
MDYIQQDLDLIRTATGDADEEGVQKQTVKKKISKRTGTGPAEIISKREKGTAGARKNETK
KMKVEEKKARNSPTLGKIKLPFIKKQQQSEISQASPKSFKDKKMVHMHFVYSYVPVMATK
SKKTIEPQTIVKGESSTSKPTSAKVKGGIDPNATPLEAIRFVEDAKIEAVDNGIWYKAKI
VKVDEDKMEILVHFVGWGSKFDRTFSMTSAMIRGRTQLDEKPDVLKFEEGEDVLGKWSDG
NFYPATVLKVAKSGSYNVMFFDGLKKSLRPSHLKKMTEKEKEEAMLAAQKLLLLPPECVL
QDSSGSSASPSSDGRRYRTSANDREKRLNARSHGGTPAPVRNAKRKADVLYTPEVLEVSG
QDPKDSSDGEAMIAKKARLDKITTNLISRVSPNSESRESDRKEVTIRNEEETPKSSKMRT
DIVADNEQVHKVAPKSDTVEKKEVVVAASTKKTPARRGRPPKQKVPQVKPPAKVSPINGT
VPFFQPRFQSDISNISLSTAELKESLKSPDTEVAESIEKASREHENTHSTTVADHNESLK
SNETPTRDTNLISPRTPPSNESSFQPKPPQSKRQRSQSIELKKGXGRPTIKTTGIGRGLS
VSAQNRRRTIASISDAKRDSPVARRRMRRLNDGFGNQYRPNEKVLAKWTDLRWYPATVVK
KMDNEHYQVMYADNMTKLVRDTWXSPWNPPKPDSPAQQKSSTVESSMKTDSPKSPEIEES
VDXGGKIAIQFLPGRTVLARYTDGTSYPATVKEKLDGGKYLVEYDNGVRHNVKFSSMNPW
STTALPPLKKKVMRKLYQPKVTETLQKPQIIELLKQEKHEQAMSTTSTEQVICGFDAXHA
RSPVQMATDTDHHKFKCKAPGCTKSFRKEEMLRTHQKHYHQQRYKRRDQNGIPVTTKKKT
PKDEGTPFHLIQAGTGANHIVFLVVNRRVSSDNGVMPKATITVEDVCIIPKSRGAKPPIE
IYQRHHEQSTALSSFPITSSSSSAEDVKVIEKQPVKQSEITVKPSDAKPSIATTRKRQRS
SDAKEDETKTVHDKQSDLPDNDAEEDDEASSDPVNEDVIRCTCNVDEEKGFMIQCEGCFT
WQHAACVGVKQTESKKEKHRDEKTGKFKTGEKIETATGKLQASSDGYICWVCKHPQHXRR
NRKYNYNNEFIKKGKLPLLVYPSAAHPGDAVNPQIRDVSKMMEEIVKMQESIIGIKNMIK
IASAPNHPLLKTWNESVLQKRVVKIASESQAAQTAKYPDSQDQSIKLASSVKSKTSMRKN
QQLPSLSANTNHKSDILRQKENLLDHVTELETELDSRITKLIEYISKLNENLGDDDASDS
LQEDLTTVQRLLKNR
Nucleotide sequence
Length: 4,425
>Boleac.CG.SB_v3.S72.g13547.01.t
AGAAATCTAGTGCTATTTTATACTATTCCAACTCAAACTGTTTGTTGAGTTTGAGTATTT
TTTTACACCGTAGGTTTTGTGACATACTGTGAATTGGAATGGACTACATACAGCAGGATT
TGGATTTGATCAGAACTGCGACTGGAGATGCTGACGAAGAAGGAGTACAGAAACAAACGG
TGAAAAAGAAGATATCCAAACGTACCGGTACAGGACCTGCAGAGATAATTTCAAAAAGAG
AGAAAGGGACGGCTGGGGCAAGGAAGAATGAGACTAAAAAAATGAAAGTTGAAGAAAAGA
AAGCGCGGAACAGCCCAACCCTCGGAAAAATTAAGCTTCCTTTTATCAAAAAGCAGCAAC
AGTCGGAAATATCCCAAGCGTCGCCGAAATCATTTAAAGATAAGAAAATGGTGCATATGC
ATTTTGTATATTCTTATGTACCGGTAATGGCCACCAAGTCAAAGAAAACTATTGAACCTC
AAACTATCGTCAAGGGAGAATCCAGCACTTCAAAACCGACATCAGCTAAAGTAAAGGGTG
GTATTGACCCGAATGCTACTCCACTGGAGGCTATACGATTTGTTGAAGATGCAAAAATAG
AGGCAGTTGACAATGGCATATGGTATAAAGCCAAGATTGTGAAGGTTGATGAAGACAAGA
TGGAAATACTGGTACACTTTGTTGGATGGGGCAGCAAATTCGACAGGACATTTTCGATGA
CAAGTGCGATGATCAGAGGCCGCACCCAACTCGATGAAAAGCCTGATGTCTTGAAATTTG
AGGAGGGTGAAGATGTCCTTGGTAAATGGAGTGATGGAAACTTTTATCCTGCAACCGTAT
TGAAAGTTGCCAAATCAGGATCGTACAATGTGATGTTTTTTGACGGACTGAAAAAGTCAC
TAAGGCCATCCCATTTGAAGAAGATGACTGAAAAGGAAAAGGAAGAAGCGATGCTGGCGG
CACAGAAGCTGTTACTCCTCCCTCCAGAATGTGTACTTCAAGATTCGTCCGGAAGCAGTG
CATCGCCTTCTTCTGATGGAAGAAGATACCGCACTTCTGCTAATGATCGAGAGAAACGAC
TGAATGCTCGAAGTCATGGTGGTACCCCTGCTCCTGTAAGAAATGCTAAAAGAAAAGCTG
ATGTCCTTTACACCCCTGAAGTACTTGAGGTTTCTGGTCAAGATCCAAAAGACTCATCGG
ATGGTGAAGCGATGATTGCTAAAAAAGCAAGACTGGATAAAATAACCACAAACTTGATAA
GCAGGGTATCCCCCAACTCAGAGAGTAGAGAAAGTGACCGAAAGGAAGTAACTATACGTA
ATGAAGAAGAAACGCCTAAATCAAGCAAAATGAGGACGGATATTGTTGCTGATAATGAGC
AAGTTCACAAGGTAGCTCCAAAAAGTGATACAGTTGAAAAGAAAGAGGTAGTAGTGGCTG
CAAGTACCAAGAAAACACCAGCACGTCGAGGTCGTCCTCCAAAGCAAAAGGTGCCACAAG
TAAAACCACCAGCAAAAGTATCCCCAATTAATGGTACCGTACCATTCTTTCAACCACGTT
TTCAATCTGACATTTCTAACATTTCACTTTCTACAGCAGAATTGAAAGAGTCTCTGAAGA
GCCCTGACACTGAAGTTGCTGAAAGCATAGAGAAAGCAAGCAGAGAGCACGAGAATACTC
ATTCAACTACGGTTGCTGACCATAATGAAAGCTTGAAAAGTAATGAAACTCCCACCCGTG
ATACAAATCTGATAAGTCCAAGAACTCCTCCCAGTAATGAGTCGTCATTCCAGCCGAAGC
CACCACAATCAAAACGCCAAAGAAGTCAATCTATAGAATTGAAGAAAGGCCNAGGTAGAC
CAACAATCAAGACTACTGGAATTGGAAGAGGGTTATCAGTTTCAGCACAGAACAGAAGAA
GAACGATAGCAAGCATATCTGATGCGAAACGAGATTCTCCTGTTGCTCGTCGACGTATGC
GAAGATTGAATGACGGGTTTGGTAATCAATATCGTCCGAATGAAAAGGTCCTTGCTAAAT
GGACAGACCTTCGTTGGTACCCAGCCACGGTAGTGAAAAAGATGGACAATGAGCACTACC
AAGTTATGTATGCAGACAACATGACAAAGTTGGTTCGTGACACTTGGTTNAGCCCATGGA
ATCCGCCCAAACCAGATAGTCCCGCTCAGCAAAAGTCTTCAACAGTAGAAAGTTCAATGA
AAACTGATTCTCCAAAATCACCCGAGATTGAAGAGTCAGTGGATAANGGTGGTAAGATTG
CAATCCAGTTTTTACCAGGGAGGACGGTGTTGGCACGTTACACGGACGGCACCAGTTACC
CAGCTACTGTTAAAGAAAAGTTGGATGGAGGGAAATATTTGGTTGAATACGATAATGGTG
TGAGACACAATGTAAAATTCTCATCCATGAACCCTTGGAGTACAACTGCACTGCCACCTC
TCAAGAAGAAAGTGATGAGGAAATTATACCAACCAAAAGTTACCGAGACTCTTCAAAAGC
CACAGATCATCGAGTTATTGAAGCAAGAGAAACACGAACAAGCAATGTCGACAACATCGA
CTGAGCAAGTCATTTGTGGATTTGACGCTCNTCATGCAAGATCACCAGTCCAGATGGCAA
CTGATACTGACCACCATAAATTCAAGTGCAAAGCACCGGGATGCACCAAATCATTCCGCA
AAGAAGAAATGTTGCGAACGCATCAGAAGCATTATCATCAACAACGGTATAAGCGTAGAG
ATCAAAACGGTATTCCAGTAACCACAAAAAAGAAAACTCCAAAAGATGAAGGTACCCCTT
TTCATTTAATACAGGCAGGAACTGGTGCTAATCATATAGTGTTTCTAGTTGTGAATCGAA
GAGTTTCATCTGACAATGGAGTTATGCCCAAAGCCACTATTACTGTAGAAGATGTTTGTA
TCATTCCGAAAAGCAGAGGCGCCAAACCACCGATAGAAATTTATCAAAGACACCATGAAC
AGTCGACAGCATTATCCAGTTTCCCCATCACCAGTAGCAGCTCAAGTGCTGAAGACGTCA
AAGTCATTGAGAAACAACCTGTAAAACAAAGTGAAATCACAGTGAAGCCATCTGATGCAA
AACCCTCCATCGCGACAACACGAAAGCGGCAGCGAAGTTCTGATGCAAAAGAAGACGAGA
CAAAAACAGTACATGATAAGCAAAGTGATCTTCCAGACAATGATGCTGAAGAAGATGATG
AGGCCAGTTCTGATCCTGTCAATGAAGATGTCATAAGATGCACATGCAATGTGGATGAGG
AGAAAGGATTTATGATCCAATGTGAAGGTTGTTTCACCTGGCAGCATGCTGCTTGTGTTG
GTGTGAAACAGACAGAAAGTAAGAAAGAGAAACATCGAGATGAGAAGACTGGAAAATTCA
AAACAGGAGAAAAAATTGAAACAGCGACTGGAAAACTACAGGCATCTAGTGATGGATATA
TTTGCTGGGTTTGCAAGCACCCGCAACATNTTAGAAGAAATAGAAAATATAACTACAATA
ATGAATTCATCAAAAAAGGTAAACTGCCATTGTTGGTTTACCCCAGTGCCGCCCATCCTG
GTGATGCAGTGAATCCACAAATTCGTGACGTGTCAAAAATGATGGAAGAAATTGTGAAAA
TGCAGGAGAGCATCATTGGGATTAAGAACATGATTAAAATCGCATCGGCTCCTAATCACC
CACTTCTGAAAACATGGAATGAATCAGTTCTGCAGAAAAGAGTTGTGAAGATTGCGAGTG
AAAGCCAAGCTGCCCAAACTGCAAAATATCCTGATAGCCAGGACCAGTCTATAAAATTGG
CGTCTTCTGTGAAATCCAAGACTAGCATGAGGAAGAATCAGCAATTACCTTCTCTATCTG
CCAACACAAACCATAAATCTGATATCCTGAGGCAAAAAGAAAATCTTCTTGATCATGTCA
CTGAGCTTGAAACTGAACTCGACAGTCGTATTACTAAACTGATCGAGTATATATCAAAAT
TGAATGAAAATCTGGGTGATGATGATGCATCAGACTCTCTACAAGAGGACTTGACCACCG
TGCAAAGATTACTCAAGAATCGTTGATGNATACCTACCGAGTGGTTGATCCAATCCTCAT
TTGAAGAATTTTCTTGAAATTCAAGTGCTTGAGAAAAAGACCAGATGCTTTATAATTCGA
TTATTGGCGTTTTAAAAGACTTGAACTAGATGAATCAGCACAAAAATTCTGAATTGATTT
GTATCAAAAGACGTGCTGTAATGGCTTGGTCGCACAGTGGAGGACAGCCACAGGTGCGAA
TTTATGTAATTCTTCATGAACATGTGGCCAATTGAGGAGGCCACATTTGTGTATCCGTGT
TTGAGTTTTTGTTCAATAAAACCAAGTTTTGGTTTTTGTGAGTCG
| PANTHER |
PHF20 (IPR037915) - T[20-144] 9.5E-46 - T[159-575] 9.5E-46 - T[625-701] 9.5E-46 - T[730-807] 9.5E-46 - T[825-1089] 9.5E-46 - T[1125-1255] 9.5E-46 - T[1239-1298] 9.5E-46 |
| SMART |
Tudor (IPR002999) - T[159-216] 2.0 - T[225-281] 1.0E-9 - T[636-694] 0.007 - T[729-785] 0.57 |
| SUPERFAMILY |
Chromo-like_dom_sf (IPR016197) - T[159-214] 2.2E-10 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[855-885] 10.866 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[857-880] . |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[1053-1097] 5.54E-11 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1056-1109] 2.1E-13 |
| SMART |
Znf_PHD (IPR001965) - T[1060-1133] 6.0E-8 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[1061-1132] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P20L1_HUMAN | 32.576 % | 89.4 | 8.26E-18 |
| PHF20_HUMAN | 33.594 % | 83.2 | 6.49E-16 |