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TRANSCRIPT CARD

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  1. Clone 'cien45424'
  2. Clone 'cicl084h09'
  3. Clone 'cihA3E6S'
  4. Transcript 'Phfumi.CG.MTP2014.S1...'
  5. Transcript 'Boleac.CG.SB_v3.S73....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S73.g13654.01.t

Possible name(s)

RPS15

Location

S73 [159,551 / 159,995]

Sequences

Amino acid sequence

Length: 147

>Boleac.CG.SB_v3.S73.g13654.01.p
MAEQEVKKRRTFRKYTYRGIDLDQLLDMTTEEMLEHYPCRIRRALTRRHTTKRKQLSLMK
RLRKAKKEAPPMEKPECVKTHLRNMIVVPEMVGNVIGVYNGKTFNQVEVKPEMIGHYLGE
FSITYKPVKHGRPGIGATHSSRFIPLK

Nucleotide sequence

Length: 444

>Boleac.CG.SB_v3.S73.g13654.01.t
ATGGCTGAACAAGAGGTCAAGAAAAGGCGTACCTTTCGTAAATATACCTACCGTGGTATC
GATTTGGACCAACTTTTGGACATGACGACTGAGGAAATGCTGGAGCATTACCCGTGTCGT
ATCAGACGTGCTTTGACCAGGCGTCATACCACGAAACGTAAGCAGTTGTCTCTTATGAAA
AGGTTGCGTAAAGCCAAGAAAGAGGCGCCTCCAATGGAAAAACCAGAATGCGTGAAGACG
CATCTTCGTAACATGATAGTCGTGCCCGAAATGGTTGGTAACGTCATTGGTGTTTACAAT
GGAAAGACCTTCAACCAAGTCGAAGTAAAACCAGAGATGATTGGGCACTACTTGGGCGAA
TTCAGCATCACATACAAGCCAGTCAAACACGGTAGACCCGGTATTGGTGCCACCCACTCC
TCAAGATTTATTCCATTGAAATGA

InterProScan

PANTHER
Ribosomal_S19 (IPR002222) - T[1-147] 1.1E-73
Gene3D
Ribosomal_S19_SF (IPR023575) - T[1-147] 5.8E-69
PIRSF
Ribosomal_S19 (IPR002222) - T[1-147] 4.4E-39
TIGRFAM
Ribosomal_S19A/S15e (IPR005713) - T[12-147] 4.9E-64
Hamap
Ribosomal_S19 (IPR002222) - T[41-136] 20.932
Pfam
Ribosomal_S19 (IPR002222) - T[52-130] 2.0E-35
SUPERFAMILY
Ribosomal_S19_SF (IPR023575) - T[52-131] 2.49E-31
PRINTS
Ribosomal_S19 (IPR002222) - T[80-99] 1.0E-14 - T[100-112] 1.0E-14 - T[112-127] 1.0E-14
ProSitePatterns
Ribosomal_S19_CS (IPR020934) - T[100-124] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS15_HUMAN 78.231 % 228 2.73E-78