- Transcript 'Boleac.CG.SB_v3.S368...' >
- Transcript 'Boleac.CG.SB_v3.S7.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S7.g13325.01.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
S7 [692,915 / 701,713]
Amino acid sequence
Length: 450
>Boleac.CG.SB_v3.S7.g13325.01.p
MLPSPHNSTPFSVKDILNLESQRQQAEASAFLVTDHNSASRGSLTRASVSQETIETSYEY
SRGERGFRYGNETSGSPVGTQTCVPAVQNGSSPQPTHYYPRGGPASEAGSDELIDPSGPS
DIVDQASQYSSRQTFPVATSDRESTENNSIFHVNEPMHHRSEVSQFAAGKSPSSQNKVVE
SDTAPDDSSIHLEESEKLDNVSNSSGSPDDDDKKKQEEDPSKNRQRTRRKPRVLFSQAQV
FELERRFKQQRYLSAPEREQLAQILKLTSTQVKIWFQNRRYKCKRQRQDKTLELASACPP
RKVHVPVLIRDGQPCLASPTGSLPGGHHSLQVPYSAPYNVTVSPYHSYPSSYTSCGYNTY
HPNSNTYSHNAAAAAAAAAYGTAATAGYNPLSGPPMGSSMGAVGGIPGSALHHQSTVRPT
AFATMQGQMQQQPIRNHSTQDYMYKLGLCT
Nucleotide sequence
Length: 2,885
>Boleac.CG.SB_v3.S7.g13325.01.t
ATGCTACCTAGCCCCCACAACTCGACCCCGTTTTCCGTGAAAGATATTTTGAATTTGGAA
AGTCAACGTCAACAAGCAGAAGCGTCAGCATTTCTTGTCACTGACCACAATTCTGCAAGT
CGAGGATCGCTCACTCGCGCATCTGTGTCGCAAGAAACAATCGAAACAAGCTACGAATAT
TCAAGAGGAGAAAGGGGTTTCCGTTACGGTAACGAAACTTCAGGATCGCCGGTGGGTACG
CAAACTTGCGTCCCCGCCGTCCAGAATGGATCCTCTCCCCAACCAACACACTATTACCCC
CGTGGGGGACCAGCTTCTGAAGCAGGAAGCGATGAACTGATTGACCCAAGTGGTCCGTCC
GATATAGTCGATCAAGCGAGTCAATATTCAAGCAGACAAACATTCCCAGTTGCCACCTCG
GACAGAGAAAGCACAGAAAACAACAGCATCTTTCATGTCAACGAACCAATGCATCATCGA
TCCGAGGTCTCTCAGTTTGCAGCCGGCAAGTCACCAAGTTCTCAAAACAAAGTAGTGGAA
TCCGATACGGCTCCGGATGACTCCAGCATTCATTTAGAAGAATCTGAAAAGTTAGACAAC
GTCAGCAATTCCAGTGGAAGTCCAGACGACGACGATAAAAAGAAGCAAGAAGAAGATCCA
TCCAAAAACAGACAACGGACGCGACGTAAACCGCGGGTTTTGTTTTCTCAAGCTCAGGTT
TTTGAGCTTGAGAGACGATTCAAGCAACAGCGTTACTTATCCGCACCTGAGAGGGAACAG
CTCGCTCAAATACTCAAACTGACTTCAACGCAAGTCAAGATTTGGTTTCAAAATCGAAGA
TACAAATGCAAACGCCAGAGACAAGATAAGACTTTAGAACTTGCCAGCGCGTGTCCACCT
CGAAAAGTCCACGTGCCAGTTCTTATTAGAGATGGACAACCGTGCCTCGCAAGTCCTACA
GGATCTCTACCGGGTGGACATCATTCATTGCAAGTCCCATATTCCGCACCGTACAATGTC
ACCGTGTCACCTTATCATAGCTACCCAAGCTCGTACACGTCATGTGGATACAATACGTAT
CACCCTAATAGCAATACGTACTCCCATAATGCTGCAGCCGCAGCGGCAGCTGCTGCTTAT
GGCACTGCTGCCACTGCTGGATATAACCCTCTATCTGGACCACCAATGGGGTCTAGTATG
GGGGCTGTGGGAGGAATCCCCGGGTCCGCTCTCCACCATCAATCAACGGTAAGGCCAACA
GCATTTGCGACAATGCAAGGGCAAATGCAGCAACAGCCTATTAGGAACCACTCAACCCAA
GATTATATGTATAAATTAGGGCTGTGTACATGACTAGACCGGGAGCATATAAGCAACGAA
TTTGGGTCATGAAGATCCATGGCTGGAACTATATTTCCCATTTTTTTTCAATATGCAGTA
CTATCTCTGTACGAGCTATTTACGTATTGGAACACTGATTATATGATAGTAATCAACTGA
CAAGCGCATTTTGTGCAATTTCATTTTTGTTCTGGTGATTTTTTTCTTCCTCCATATTTA
ATATTTGTGATCGCTGGTCATCATATTTCACTTTGAATTGTCATACTTTTCTACGAAATA
AAATCCTTAAGCCAAAATATGACCATATATGATTCGAAAAATAAGATCTGTCCATTAATG
CTGACTTGTAGTCATGCTATCATGATTCATATACCGAGCAACTGCTAGTATGTGATGATA
ATTTCAGTTGTTGCATTCCTAAGCCTTGTTTGATACAACGGCACTCATGGAAATCGTTTA
TTGGCGAATATAATGACATTTTGGAAATAAATTATTCTGTAAATACGTACTAGAAAATTT
TTTTCTGCCAAGCCAACAGTTGCAGAACGCGGTAATTCTCGAATTTAAAATCGATTTGCT
GCTCTCTTGTTGTATATTTGAAGGCGGTCTTCGCAAATTCACAATTGTACTCTATGTTTG
CATGTTCGCAACCAACTGATTTGTATATTTGACTGAGCATATCTTAAATGACGAAAAATT
AGGCCCCAACGCGTCCACAGACCACCGCCACCACCAATTTTAGTGGTTTCTTTCGACATT
TCTTTNGTCCGATTTCATAAAGTAAGTTTTACAAAATTTTCAATCAATTTCAATCTTAAC
CCAACAGAATTTCCAATACCAACTCGTTGTCGTGAGACATAGCACTATACCGAATTCACA
ACCAAAACTTCGCTTTTGTACCCTCTTAAATGAAAGCACTTCGCTCTTTCAATCTGATCC
NCNGTTCCAGNAAGAAATATTTGAAATATATGTAACCCCTAAACCCAACATACTCCTTTG
TCATAGACGACTTAATTATATGGAGCGGGGCTTCGAATGTGTACTTCAGAATTAAGTTTC
CGTCAAGGGATGTTGATTTTGTAGTGGGACTCAAATTGTACGATTTTTTCCATTATGGAA
AACCTCCCCGCAATATTAATCGATTCGTTGTGCGATTCAACGTTGCCACTCAATGTAGTA
ACTTGCGTTAATGATCTCACCGTAACTTAAGTTAAAAAGAATATTATCTTTAATAATTAG
ATACGTAGGCGTTTAGTCAACAGTCTGAGCATTGTGTAATATCTTTTCTTATATTTTCTT
ATATGTTCTCATTTTTCTGACAAGACGTTTTTGATTGTTGCGTCGTTTCTATTAAGTCAT
TGTGTCGAAATCATGAACTCAGAATTTAAATCTTCGTGGGACCTTTTCATGAAATATCTC
GCCACGTGCAGCTGGTACAAGCAATAAAATATTCACAGATTATGAATACGAGTGTGTCAG
TGTGTTCTGATGTACCAAAAAATTAGCCAGTGACTATAAATAGGGACACTATATGACTGT
ATCCA
| PANTHER |
NKX-2.5 (IPR033629) - T[1-95] 1.6E-82 - T[161-388] 1.6E-82 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[219-287] 2.82E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[226-286] 20.536 |
| SMART |
Homeobox_dom (IPR001356) - T[228-290] 4.3E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[229-287] 2.42446E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[229-285] 7.3E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[250-261] 2.4E-6 - T[265-275] 2.4E-6 - T[275-284] 2.4E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[261-284] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 52.973 % | 168 | 1.24E-48 |
| NKX25_HUMAN | 59.398 % | 152 | 1.12E-42 |
| NKX23_HUMAN | 63.121 % | 153 | 2.31E-42 |