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  1. Transcript 'Boleac.CG.SB_v3.S81....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S81.g14413.01.t

Possible name(s)

LRP5; LRP6

Location

S81 [11,843 / 19,809]

Sequences

Amino acid sequence

Length: 930

>Boleac.CG.SB_v3.S81.g14413.01.p
MNYTGSILIVLLHLVRSYPISTGQQNSPRLVWTSSNENTKTSSIFAAPLSHFEKLSSDLN
PEKIASLKYPHLLSPIGRYQVISRTYIYVMYIFSSSNDIRHEFIAADTGRRNIVSFSEKS
YKFVGHLGGTSKTVSGIAVDWSTGNIYWADRERRWVAASKWNLNQMTLIVRNVPNSKGLA
VYPRKGFLFWTEHPSQEQGEIWKSTLSGHQRKKLRSCLGSIEAISLDSTTGRLYWIEHQT
RTVWSTDPGILANAVRIHTGKDGISGLAARDGLIFISEDINGTIIAINEVTKAVISSFKV
INPHGIVISGGGYQQLFSGPCDIENGGCQEFCFPQPPGNKRTCGCSTGLTLSLNGTGCES
NMIKGEFFLIVDSDMHLIFQISADGSKLSRLILPQVKIPVQVEFDSETQTLYWTDIGTRS
ISSARLDGAXHRVLASDNVQQPTGLALDSVSKNIYWTDEGTSSINVMKVDGTHRRALLHE
DVKSPRGIAIDLSLGLMWWSDWTKRTIEIAHMDGKCSNTDMPLNDRDEKQLYWVDAHTDA
IYKSNPDGSNIQVVEEFPKTAHAFGITITQEYLYWTDWSQPAVVRLPKHGRRNENIPELF
GPKIFSKICDIDFVSSVATQQVHHPCGTHYNNCTEMCVPVPSNSIVYGVGSIHKDLDGRC
ICGDDKRSKCRPSRQLDEGVPFTSAPVVPCQKNVTVVARQCEESVLLNSRVXALEMQVHD
LPSRFTEGIHKQNYEVQDPDGKRRNCEFYVTVKGDIDLYNKRCYLVTHRRKCRFLPVVTC
EDINEYLKLRLGMNMTHASCGNKFGSXVELNCHDGYQITGSAYMTCDINGQWIGQSACIS
NERLYNLDTLSRDVQQKELQQTIACASGRGSANRAFADIEQTIINHANAGLPTVSITTEL
DDRILDQAIYSEPEGSDMLYASSRGRSITE

Nucleotide sequence

Length: 2,790

>Boleac.CG.SB_v3.S81.g14413.01.t
ATGAATTATACTGGAAGTATTTTGATCGTTCTTCTTCACCTCGTCCGGTCTTACCCAATT
TCAACAGGGCAGCAAAACTCTCCCCGACTAGTCTGGACGTCATCGAATGAGAACACAAAG
ACAAGCAGCATTTTTGCCGCTCCCTTGTCCCATTTCGAAAAACTGTCTTCCGATCTAAAT
CCAGAGAAGATTGCGTCACTGAAATATCCGCACCTACTGTCCCCTATTGGAAGGTATCAA
GTTATTTCTCGTACATATATCTACGTAATGTACATCTTTTCGAGCAGCAACGATATTCGG
CACGAATTCATAGCAGCAGATACAGGCAGAAGGAATATAGTTTCATTCAGCGAAAAATCG
TATAAATTCGTCGGACATCTTGGCGGAACATCAAAAACAGTTTCGGGGATAGCTGTTGAT
TGGTCGACCGGGAACATTTACTGGGCAGACAGGGAAAGGCGATGGGTAGCAGCTTCAAAA
TGGAACCTCAACCAGATGACTTTGATTGTAAGGAATGTGCCAAATTCCAAAGGACTTGCC
GTCTATCCACGGAAAGGGTTTTTGTTTTGGACTGAGCACCCTTCTCAGGAGCAGGGAGAA
ATTTGGAAAAGCACACTCTCTGGGCATCAACGAAAGAAACTTCGTTCATGTCTCGGCTCG
ATTGAGGCAATTTCGCTTGATTCTACCACAGGAAGACTATACTGGATTGAACACCAAACG
CGCACGGTTTGGTCGACAGATCCTGGAATATTGGCGAACGCTGTTCGGATTCATACGGGA
AAAGATGGCATATCAGGACTGGCAGCTCGTGATGGCTTGATCTTCATTTCCGAAGATATC
AACGGTACCATAATTGCTATAAACGAGGTGACAAAAGCAGTCATTTCGTCCTTCAAAGTG
ATTAATCCTCATGGAATAGTAATATCTGGCGGTGGATATCAACAACTATTTTCCGGTCCA
TGTGATATCGAAAATGGCGGATGTCAAGAATTCTGCTTTCCGCAGCCACCCGGAAATAAA
CGGACGTGTGGTTGTTCAACTGGACTGACATTGTCATTGAATGGCACGGGTTGTGAGTCA
AATATGATAAAGGGTGAATTTTTTCTCATTGTCGATTCCGACATGCACCTTATTTTTCAA
ATTTCTGCGGATGGCTCAAAACTCAGCCGCCTCATACTTCCACAAGTTAAAATTCCTGTA
CAAGTAGAATTCGACAGTGAGACGCAAACGCTATACTGGACTGATATTGGCACCAGGTCA
ATCAGCTCGGCGCGTTTGGACGGCGCTAANCACCGTGTTCTTGCTAGCGACAATGTGCAA
CAACCNACTGGATTAGCATTAGACAGTGTTTCAAAAAACATTTACTGGACTGACGAAGGT
ACAAGTTCAATCAATGTCATGAAAGTGGATGGAACACATCGCAGAGCATTATTACATGAA
GACGTTAAATCACCGCGAGGGATTGCGATTGACCTCTCCCTAGGATTGATGTGGTGGTCT
GATTGGACGAAACGAACGATCGAGATCGCCCATATGGACGGCAAATGCTCTAACACCGAT
ATGCCTCTCAACGATAGAGACGAGAAACAACTCTACTGGGTAGATGCTCATACTGATGCC
ATCTACAAGTCCAATCCAGACGGCAGCAATATACAAGTGGTGGAAGAGTTCCCTAAGACT
GCTCACGCTTTCGGAATAACAATTACACAAGAATATCTGTACTGGACTGATTGGAGCCAA
CCGGCTGTTGTGAGACTACCAAAGCATGGACGAAGAAACGAAAACATCCCTGAATTGTTC
GGACCGAAAATATTTAGCAAAATATGCGATATTGATTTCGTATCATCAGTAGCGACGCAA
CAAGTTCACCATCCATGCGGAACGCATTATAACAATTGCACAGAAATGTGTGTTCCAGTG
CCTTCAAATTCAATTGTATACGGAGTTGGTTCAATACATAAGGATCTTGATGGGCGGTGT
ATTTGTGGCGATGATAAGCGAAGCAAATGTCGTCCTTCGAGACAGCTGGATGAGGGAGTG
CCTTTCACGTCGGCGCCGGTCGTTCCGTGCCAAAAAAATGTCACTGTAGTGGCACGACAA
TGCGAAGAGTCCGTTTTACTTAATTCGCGAGTACNTGCGTTGGAAATGCAAGTTCATGAC
CTACCATCACGCTTCACTGAAGGCATCCATAAACAAAATTACGAAGTGCAAGACCCGGAT
GGCAAACGACGAAATTGTGAATTTTACGTTACTGTTAAAGGTGACATAGATTTATACAAT
AAACGATGCTATCTTGTCACACATCGGCGTAAATGTCGCTTTTTACCAGTTGTCACATGT
GAAGATATCAATGAATACCTCAAACTACGCCTGGGTATGAATATGACTCATGCATCTTGT
GGTAACAAATTTGGCTCCNTTGTTGAACTGAATTGCCATGATGGATATCAAATAACTGGA
TCTGCTTACATGACATGTGATATCAACGGTCAATGGATTGGCCAAAGTGCTTGCATTTCC
AACGAACGACTTTACAATTTGGATACACTCTCAAGAGATGTTCAACAGAAGGAATTGCAG
CAAACCATCGCCTGTGCAAGCGGACGTGGTTCAGCAAATCGTGCTTTTGCCGATATCGAA
CAAACTATCATCAATCACGCCAATGCCGGGCTTCCAACAGTTTCCATCACCACTGAACTA
GACGACCGTATTCTTGACCAAGCGATCTACAGCGAGCCAGAAGGAAGCGACATGTTATAT
GCAAGTAGTAGAGGCCGATCCATTACAGAA

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[79-360] 3.4E-41 - T[361-671] 3.8E-66
SMART
LDLR_classB_rpt (IPR000033) - T[121-166] 0.11 - T[167-211] 11.0 - T[389-431] 3.6E-4 - T[432-474] 1.3E-12 - T[475-517] 1.7E-6 - T[551-591] 17.0
ProSiteProfiles
LDLR_classB_rpt (IPR000033) - T[144-185] 8.462 - T[186-230] 6.606 - T[231-243] 5.329 - T[366-408] 5.167 - T[409-451] 15.841 - T[452-494] 15.656 - T[495-514] 7.882 - T[529-572] 10.342
Pfam
LDLR_classB_rpt (IPR000033) - T[410-448] 6.0E-11 - T[453-491] 2.6E-9
ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[778-840] 9.525
SUPERFAMILY
Sushi/SCR/CCP_sf (IPR035976) - T[778-839] 5.84E-8
CDD
Sushi_SCR_CCP_dom (IPR000436) - T[793-832] 2.51427E-6
Pfam
Sushi_SCR_CCP_dom (IPR000436) - T[802-835] 3.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRP4_HUMAN 26.838 % 195 5.58E-51
LRP6_HUMAN 27.083 % 209 1.19E-55
LRP5_HUMAN 27.307 % 207 6.04E-55





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