- Transcript 'Boleac.CG.SB_v3.S81....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S81.g14413.01.t
Possible name(s)
LRP5; LRP6
Gene model
Location
S81 [11,843 / 19,809]
>Boleac.CG.SB_v3.S81.g14413.01.p
MNYTGSILIVLLHLVRSYPISTGQQNSPRLVWTSSNENTKTSSIFAAPLSHFEKLSSDLN
PEKIASLKYPHLLSPIGRYQVISRTYIYVMYIFSSSNDIRHEFIAADTGRRNIVSFSEKS
YKFVGHLGGTSKTVSGIAVDWSTGNIYWADRERRWVAASKWNLNQMTLIVRNVPNSKGLA
VYPRKGFLFWTEHPSQEQGEIWKSTLSGHQRKKLRSCLGSIEAISLDSTTGRLYWIEHQT
RTVWSTDPGILANAVRIHTGKDGISGLAARDGLIFISEDINGTIIAINEVTKAVISSFKV
INPHGIVISGGGYQQLFSGPCDIENGGCQEFCFPQPPGNKRTCGCSTGLTLSLNGTGCES
NMIKGEFFLIVDSDMHLIFQISADGSKLSRLILPQVKIPVQVEFDSETQTLYWTDIGTRS
ISSARLDGAXHRVLASDNVQQPTGLALDSVSKNIYWTDEGTSSINVMKVDGTHRRALLHE
DVKSPRGIAIDLSLGLMWWSDWTKRTIEIAHMDGKCSNTDMPLNDRDEKQLYWVDAHTDA
IYKSNPDGSNIQVVEEFPKTAHAFGITITQEYLYWTDWSQPAVVRLPKHGRRNENIPELF
GPKIFSKICDIDFVSSVATQQVHHPCGTHYNNCTEMCVPVPSNSIVYGVGSIHKDLDGRC
ICGDDKRSKCRPSRQLDEGVPFTSAPVVPCQKNVTVVARQCEESVLLNSRVXALEMQVHD
LPSRFTEGIHKQNYEVQDPDGKRRNCEFYVTVKGDIDLYNKRCYLVTHRRKCRFLPVVTC
EDINEYLKLRLGMNMTHASCGNKFGSXVELNCHDGYQITGSAYMTCDINGQWIGQSACIS
NERLYNLDTLSRDVQQKELQQTIACASGRGSANRAFADIEQTIINHANAGLPTVSITTEL
DDRILDQAIYSEPEGSDMLYASSRGRSITE
>Boleac.CG.SB_v3.S81.g14413.01.t
ATGAATTATACTGGAAGTATTTTGATCGTTCTTCTTCACCTCGTCCGGTCTTACCCAATT
TCAACAGGGCAGCAAAACTCTCCCCGACTAGTCTGGACGTCATCGAATGAGAACACAAAG
ACAAGCAGCATTTTTGCCGCTCCCTTGTCCCATTTCGAAAAACTGTCTTCCGATCTAAAT
CCAGAGAAGATTGCGTCACTGAAATATCCGCACCTACTGTCCCCTATTGGAAGGTATCAA
GTTATTTCTCGTACATATATCTACGTAATGTACATCTTTTCGAGCAGCAACGATATTCGG
CACGAATTCATAGCAGCAGATACAGGCAGAAGGAATATAGTTTCATTCAGCGAAAAATCG
TATAAATTCGTCGGACATCTTGGCGGAACATCAAAAACAGTTTCGGGGATAGCTGTTGAT
TGGTCGACCGGGAACATTTACTGGGCAGACAGGGAAAGGCGATGGGTAGCAGCTTCAAAA
TGGAACCTCAACCAGATGACTTTGATTGTAAGGAATGTGCCAAATTCCAAAGGACTTGCC
GTCTATCCACGGAAAGGGTTTTTGTTTTGGACTGAGCACCCTTCTCAGGAGCAGGGAGAA
ATTTGGAAAAGCACACTCTCTGGGCATCAACGAAAGAAACTTCGTTCATGTCTCGGCTCG
ATTGAGGCAATTTCGCTTGATTCTACCACAGGAAGACTATACTGGATTGAACACCAAACG
CGCACGGTTTGGTCGACAGATCCTGGAATATTGGCGAACGCTGTTCGGATTCATACGGGA
AAAGATGGCATATCAGGACTGGCAGCTCGTGATGGCTTGATCTTCATTTCCGAAGATATC
AACGGTACCATAATTGCTATAAACGAGGTGACAAAAGCAGTCATTTCGTCCTTCAAAGTG
ATTAATCCTCATGGAATAGTAATATCTGGCGGTGGATATCAACAACTATTTTCCGGTCCA
TGTGATATCGAAAATGGCGGATGTCAAGAATTCTGCTTTCCGCAGCCACCCGGAAATAAA
CGGACGTGTGGTTGTTCAACTGGACTGACATTGTCATTGAATGGCACGGGTTGTGAGTCA
AATATGATAAAGGGTGAATTTTTTCTCATTGTCGATTCCGACATGCACCTTATTTTTCAA
ATTTCTGCGGATGGCTCAAAACTCAGCCGCCTCATACTTCCACAAGTTAAAATTCCTGTA
CAAGTAGAATTCGACAGTGAGACGCAAACGCTATACTGGACTGATATTGGCACCAGGTCA
ATCAGCTCGGCGCGTTTGGACGGCGCTAANCACCGTGTTCTTGCTAGCGACAATGTGCAA
CAACCNACTGGATTAGCATTAGACAGTGTTTCAAAAAACATTTACTGGACTGACGAAGGT
ACAAGTTCAATCAATGTCATGAAAGTGGATGGAACACATCGCAGAGCATTATTACATGAA
GACGTTAAATCACCGCGAGGGATTGCGATTGACCTCTCCCTAGGATTGATGTGGTGGTCT
GATTGGACGAAACGAACGATCGAGATCGCCCATATGGACGGCAAATGCTCTAACACCGAT
ATGCCTCTCAACGATAGAGACGAGAAACAACTCTACTGGGTAGATGCTCATACTGATGCC
ATCTACAAGTCCAATCCAGACGGCAGCAATATACAAGTGGTGGAAGAGTTCCCTAAGACT
GCTCACGCTTTCGGAATAACAATTACACAAGAATATCTGTACTGGACTGATTGGAGCCAA
CCGGCTGTTGTGAGACTACCAAAGCATGGACGAAGAAACGAAAACATCCCTGAATTGTTC
GGACCGAAAATATTTAGCAAAATATGCGATATTGATTTCGTATCATCAGTAGCGACGCAA
CAAGTTCACCATCCATGCGGAACGCATTATAACAATTGCACAGAAATGTGTGTTCCAGTG
CCTTCAAATTCAATTGTATACGGAGTTGGTTCAATACATAAGGATCTTGATGGGCGGTGT
ATTTGTGGCGATGATAAGCGAAGCAAATGTCGTCCTTCGAGACAGCTGGATGAGGGAGTG
CCTTTCACGTCGGCGCCGGTCGTTCCGTGCCAAAAAAATGTCACTGTAGTGGCACGACAA
TGCGAAGAGTCCGTTTTACTTAATTCGCGAGTACNTGCGTTGGAAATGCAAGTTCATGAC
CTACCATCACGCTTCACTGAAGGCATCCATAAACAAAATTACGAAGTGCAAGACCCGGAT
GGCAAACGACGAAATTGTGAATTTTACGTTACTGTTAAAGGTGACATAGATTTATACAAT
AAACGATGCTATCTTGTCACACATCGGCGTAAATGTCGCTTTTTACCAGTTGTCACATGT
GAAGATATCAATGAATACCTCAAACTACGCCTGGGTATGAATATGACTCATGCATCTTGT
GGTAACAAATTTGGCTCCNTTGTTGAACTGAATTGCCATGATGGATATCAAATAACTGGA
TCTGCTTACATGACATGTGATATCAACGGTCAATGGATTGGCCAAAGTGCTTGCATTTCC
AACGAACGACTTTACAATTTGGATACACTCTCAAGAGATGTTCAACAGAAGGAATTGCAG
CAAACCATCGCCTGTGCAAGCGGACGTGGTTCAGCAAATCGTGCTTTTGCCGATATCGAA
CAAACTATCATCAATCACGCCAATGCCGGGCTTCCAACAGTTTCCATCACCACTGAACTA
GACGACCGTATTCTTGACCAAGCGATCTACAGCGAGCCAGAAGGAAGCGACATGTTATAT
GCAAGTAGTAGAGGCCGATCCATTACAGAA
Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[79-360] 3.4E-41 - T[361-671] 3.8E-66 |
SMART |
LDLR_classB_rpt (IPR000033) - T[121-166] 0.11 - T[167-211] 11.0 - T[389-431] 3.6E-4 - T[432-474] 1.3E-12 - T[475-517] 1.7E-6 - T[551-591] 17.0 |
ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[144-185] 8.462 - T[186-230] 6.606 - T[231-243] 5.329 - T[366-408] 5.167 - T[409-451] 15.841 - T[452-494] 15.656 - T[495-514] 7.882 - T[529-572] 10.342 |
Pfam |
LDLR_classB_rpt (IPR000033) - T[410-448] 6.0E-11 - T[453-491] 2.6E-9 |
ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[778-840] 9.525 |
SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[778-839] 5.84E-8 |
CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[793-832] 2.51427E-6 |
Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[802-835] 3.1E-5 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
LRP4_HUMAN | 26.838 % | 195 | 5.58E-51 |
LRP6_HUMAN | 27.083 % | 209 | 1.19E-55 |
LRP5_HUMAN | 27.307 % | 207 | 6.04E-55 |