- Clone 'ciht012g18' >
- Transcript 'Boleac.CG.SB_v3.S503...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S81....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S81.g14417.01.t
Possible name(s)
CIAO1; KATNB1; WDR33
Gene model
Location
S81 [41,390 / 49,226]
Amino acid sequence
Length: 796
>Boleac.CG.SB_v3.S81.g14417.01.p
MATVFPSPQGNAMVEQTPPPNIPHIGIRPPRQYTPYVFQPNFLKQQMKQQRLNNESLAVA
SSSNPSDNSGHTPQPGNQPVHLNMSHIPMNLAGTILDELNKKKGGRKVVDWASSCALYLK
NRRFQRDGDDIPDLIPHTSYALEMQSVYAYRGNPMTSITSKFVRSATNKMKCPVYKVVWT
PDGRRLVTGSASGEFTLWNGVAFNFETILQLNMNNVKMYQAHKDQACRSVSFGPTDHKFV
TASDDGTVRVWDFLRCHEERILRGHGADVKQVAWHPMKGIVASASKDLHTPVKLWDPKSG
QSLVTIHAHKGTVMDVKWNQNGNWLLSASRDHLVKLYDIRNLKQEMQVFRGHKKEAFSVS
WHPIHENLFASGGSEGSILFWHVGEEKEAGSLEGAHDSLIWSLEWHPLGHVLVSGSNDHS
TKFWTRSKPGDTMRDRYNLALLPPSLDDASSTATGTLRNNDTEHESSIIPGMGDADVAEA
EVAKREQEEQKYGIPGLDWSYEEKNEFERKISTQQDRKKSSFARPVPRAFMAAWEANKEG
RPDRERPRSPRFREYERERDHRRWRERHADYPRDWNRGGPMRXGPDRPPSPGRMDEERVF
VDGIEVGPDFDPDRIKTMPENSRPGGPEHPPPPPPAFDERLPPHGPPLSPPRGRRLSDLP
PPGVGSMRELEERRRIRDELYAELLRTGSERDLELLRELEEHGLPLEDVLEEDLFFDPNN
ERMRGINELEGPGMRSIDGFPREHPLMDGRMGDLPPRHRGFPPGRDDDRFLPDRGHPGRG
WRRSPPRMLRGNGPPR
Nucleotide sequence
Length: 3,474
>Boleac.CG.SB_v3.S81.g14417.01.t
ATGGCCACAGTTTTTCCATCTCCTCAAGGAAATGCAATGGTGGAACAAACGCCGCCNCCG
AATATTCCACATATCGGGATTCGACCACCCAGGCAATACACACCATATGTATTTCAGCCA
AACTTTTTGAAACAGCAGATGAAACAACAAAGACTAAACAATGAATCGCTTGCTGTTGCA
TCCAGTTCTAATCCATCAGACAATTCTGGTCACACTCCCCAGCCAGGGAATCAACCTGTG
CATTTGAATATGTCTCATATACCAATGAATTTGGCTGGTACAATATTGGATGAATTGAAC
AAGAAGAAAGGAGGTCGCAAAGTAGTAGATTGGGCATCGTCTTGTGCACTGTACCTAAAA
AATCGGCGGTTCCAACGTGATGGCGATGATATACCAGATTTGATACCTCACACTTCATAC
GCTCTGGAAATGCAGTCAGTTTATGCCTATAGGGGAAATCCCATGACAAGTATCACATCT
AAGTTTGTCCGAAGTGCAACGAATAAGATGAAATGCCCAGTTTACAAGGTTGTGTGGACA
CCCGATGGGCGGCGCCTTGTTACTGGCTCAGCAAGTGGTGAATTCACGCTATGGAATGGC
GTGGCTTTTAATTTTGAGACGATTCTACAGCTGAACATGAATAATGTGAAGATGTACCAA
GCCCATAAAGACCAGGCATGCCGATCCGTGAGTTTTGGACCGACTGATCACAAGTTTGTA
ACGGCTAGTGATGACGGTACTGTTCGTGTGTGGGACTTTTTGCGTTGTCATGAAGAAAGA
ATCTTACGGGGCCATGGTGCAGATGTAAAACAGGTTGCTTGGCATCCAATGAAGGGGATT
GTGGCTTCGGCAAGCAAGGATCTNCACACGCCAGTGAAATTATGGGATCCCAAGAGTGGC
CAAAGTTTGGTAACAATTCACGCGCATAAAGGCACTGTGATGGATGTTAAGTGGAATCAA
AATGGAAATTGGCTCCTGTCTGCATCCCGAGATCATCTTGTCAAGCTCTATGATATTAGA
AATTTGAAACAGGAAATGCAGGTATTCCGTGGTCACAAAAAAGAAGCGTTTTCTGTGTCC
TGGCACCCAATACATGAAAATTTATTTGCAAGTGGTGGGTCNGAGGGCAGCATTCTCTTC
TGGCATGTTGGGGAGGAGAAAGAAGCTGGCTCATTGGAAGGAGCTCATGATAGTTTAATA
TGGAGTTTGGAATGGCATCCACTTGGTCATGTACTGGTTTCCGGGTCCAATGATCATAGC
ACGAAATTTTGGACCAGAAGTAAACCGGGTGATACAATGCGGGATCGGTATAACCTTGCT
TTACTACCTCCATCACTCGATGATGCGTCATCTACTGCTACTGGAACATTGAGGAATAAT
GATACCGAGCATGAAAGTTCTATAATACCAGGAATGGGTGATGCTGATGTTGCAGAAGCA
GAAGTGGCTAAAAGAGAACAAGAAGAACAGAAATATGGAATTCCTGGGCTGGACTGGTCG
TATGAAGAAAAGAATGAATTTGAACGAAAAATATCAACTCAACAGGACCGAAAGAAATCG
TCATTTGCAAGACCGGTGCCGCGAGCATTCATGGCAGCTTGGGAAGCAAACAAAGAAGGC
AGACCAGATAGAGAACGTCCGAGATCGCCACGATTTCGTGAATATGAACGAGAGCGAGAC
CACAGAAGATGGCGTGAACGACATGCCGATTATCCCAGAGATTGGAACCGTGGTGGTCCA
ATGCGACNTGGGCCTGACAGACCTCCCAGTCCTGGAAGGATGGATGAGGAAAGAGTCTTT
GTTGATGGTATTGAAGTCGGGCCAGATTTTGACCCAGACCGCATTAAAACCATGCCAGAA
AACTCTAGGCCTGGTGGACCAGAACACCCTCCACCACCACCACCAGCATTTGATGAACGA
CTTCCACCTCATGGACCGCCACTGTCCCCTCCTAGAGGGAGGCGGTTGAGTGACCTGCCT
CCGCCTGGTGTAGGATCCATGAGGGAGTTAGAAGAAAGACGCAGGATACGAGATGAACTC
TATGCAGAATTACTTAGAACTGGCAGTGAGAGAGACCTCGAGTTATTGCGAGAATTGGAA
GAGCATGGGTTGCCTTTGGAAGATGTTCTCGAAGAGGACTTATTTTTTGACCCAAATAAT
GAGCGGATGCGTGGTATAAATGAACTTGAAGGGCCAGGGATGCGTTCTATCGATGGTTTT
CCCAGAGAACATCCATTAATGGATGGAAGAATGGGAGATCTTCCTCCTAGACACAGGGGC
TTTCCTCCAGGAAGAGATGACGATAGATTTCTTCCTGACAGGGGTCATCCAGGAAGGGGA
TGGCGTAGATCTCCTCCACGAATGCTCCGAGGTAATGGACCTCCAAGATGACAATGCACG
TAGACACATCTAACTGCTGAAACGTCAAAATGTTCAAGCTATGTGATGGTCCTGCTCAAA
CGTTCATGATGTGCGACCGTGAATTATGTGTTGAAGGTGCAAATGCTTACTGCTGTTCTT
GATGATCATTTATTGTGACCAACTGCAGAGTTTTGTTTCAGTTGCATGCTTGCTGCGGGT
AATCAATAATCATATTTTTTAAAGAAAATACTGATAGGCAATGCTCTTTATCAAGCTTCT
GTGAGATCGTCATTAAAATACAGGTGAATGCCAGGGGTCCATTGTTCATAGTCCATGCTC
AATTCGTAAAACTGTTCGTCTTGGTCAACTATTCCATTCTCTTCAAGCGTCCTCTTCATG
TCCAAGGGAAGGCCATCATATTTCCAAGTGTAACTTTTAGCATGGGCATTATATTTGAGA
TATCTCTGTAGTATCTCGTCCATATTTTCCTCTGAGCAAACCTCTATTGAATGTTCCTGC
GATGTGAGTGTGTTCACTATTCTTATAAATCGTGTTTTGCTGCTGAGTACTCCAACTTCG
TATTTATTGTCTTTCCACCATGGTCGACCGAAGTCGTTTGCCCAGTCGGAATACGGCAGT
GGTGGAGGGACGTGGACAAATCTTCCCAAAGGAGTGTAGTATTTACGAATACCAGTTTTC
TTGTCAATGTGCGTTCTTATATCCCCTGTCTTCTCATCAAACCAGTGAGAGATGTCCTTT
CCTGCATTGCTGATTATTGGTTTGAGAAGAACGTCCCCTGAATATTCCTCACAAAGGGGT
GTGAGGTTGTATACCTTGCCCAGGTACGAAACCCATATATNCCTGATGGTGTTATGTAAA
CTTACTTCACCGGGGGTAAAGAAAGACGGACGATTATTGCCCTGACGCATGACTCTTGCA
CGTTTCTCGATATCGAAAGCTTACTACTGCGGAACAGCTGCCTGCGTCTCCTTTGTTTAC
CATGGTTACGAAATGTGATCACTCGTGCGTGCCCGACTCTGGTGATGAAAACTCAGTGAT
GCCTACGTTTCATGATTTTATGTCGCACCATCAATTGACCTCAGGTTTCGGTTG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[157-288] 2.5E-22 - T[289-436] 3.7E-36 |
| SMART |
WD40_repeat (IPR001680) - T[159-199] 0.023 - T[212-252] 1.5E-7 - T[255-296] 8.9E-5 - T[299-338] 6.1E-9 - T[342-382] 7.6E-6 - T[385-425] 2.5E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[167-434] 40.365 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[167-199] 9.172 - T[229-252] 11.377 - T[306-347] 12.714 - T[349-391] 10.809 - T[393-424] 11.377 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[169-427] 1.01E-59 |
| Pfam |
WD40_repeat (IPR001680) - T[214-252] 3.6E-5 - T[301-338] 9.3E-6 - T[392-424] 0.0029 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KTNB1_HUMAN | 31.405 % | 108 | 2.83E-24 |
| WDR33_HUMAN | 55.579 % | 534 | 3.73E-173 |
| CIAO1_HUMAN | 28.767 % | 91.7 | 5.93E-20 |