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TRANSCRIPT CARD

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  1. Region 'REG00001022'
  2. Region 'REG00000389'
  3. Region 'REG00001025'
  4. Molecular Tool 'pCi-Bra::Tbx6b'
  5. Transcript 'Boleac.CG.SB_v3.S81....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S81.g14448.01.t

Possible name(s)

EFEMP2; FBLN1; FBLN2

Location

S81 [257,254 / 284,725]

Sequences

Amino acid sequence

Length: 1,454

>Boleac.CG.SB_v3.S81.g14448.01.p
MFTGLNIALFLGVAGLLPSFSYQNPYPYYGPYSRSRRDPAASWQTGYGQAMPQINPMAAG
QDPGYGARGMDNQLGVGMGPSYGMNRYPSMNGKNPLQPIRGGMDSQRFREGSRQEDGASD
LPPQHGQRVNPPPPTGVQSGPSGCDGVTCDDLSNCIKVAMNESSCCPKCTKYGCVCEGYQ
LYDCQKNGFSDGMLPEGKSYKVADGTTVCSCPPGGGSILCSFRDPTSSSCPELTPXCIQP
FVREIDGCSECAKVGCVGDDGVKVEAGLTINKPPCSICYCPPAGGSLMCGVDPNCDQTSQ
RGTEGGNLALQSNVREIDSFGQSREASMYGYSPYGAGYPDYGSQFGMPXDDESPVVPPLS
PVGSDQTSQSGAESNPPKSGESSQLIPNGGYGQYQQQGYGLPYQNPYQYMDYGSQYNNYL
RSYGAGFGKNVYAGAGYPDASSSMGNAQQGNAGSXQKAAGATNPGDDAAPLAPKQEGQQA
MYDGRQGYDSSSAXVPGSDQPQQGQSYGNQDKVPSGNGFQSGQNFAGYPMPGQYGGQYGA
YPPSGNLRQYYNQRGQQSGPDDTQSGRNLQSTDSTGNALGRDRAGSQYGGVDQGQYSQSG
ANPPLQPRYQFQHPSVGQGSRSSGGSQMIPRGSDDVQSPTSNEGNMQNVNPYAQVGRKPD
SGSNSVNVPDPAAQFGEPGSRIAPKELGQNIXQITPPLMAPGSDGMNMQPRFIPPRENDE
RQSRKTRNHHGFILRGRISQEPSAVTTTTTAATTTTTTPRPTTTTTTTTAIPTTTTTKPT
TTTTTTKPTTTTTTTPPPTTTTTTTTTTTTKPTTVTTTTKPTTTTTTTRQTTTKSTTTEP
ISKSRSAERKIREDERLLMDCCSHGKMWAGTHDSCSGIIPRRVQHQELCFYAQKQCCEEA
KSESQCQNGITAARTTGSCARSGSQASCGNDHFTTCCGCCQMGLRAREEGMSCETRVFGQ
SCGKAYTRCCQQGGAESQSHTEPRCATHGTCQQICVDTIKGMLCSCRRGYKLHKDGISCE
DINECVIGTHTCTENQLCLNRQGSYFCQRRLSCGTGYELTSINTCEDIDECALGVHDCLA
SATCENQVGSYVCIPKECDAGYITXATGRCIDINECRIRTFTCPFGASCVNTEGSYECEC
PAGLRPNDEDTICEDIDECRLGISTCSKRGICVNTIGSFICREPPALTCGRGYMADESTN
SCVDVDECTAGTHSCNEGSTCINEVGGYRCQDPLLCPXGMKPSENERVCVDIDECTMRVG
RKCNYQCRNLPGSYECFCPEGYKVGSSPNTCEDVDECASSPCSGSETCFNTQGGYKCKDL
SCPTGYKRYSNTRCSRLXCRGKPRSCLKLPKXISHHNISVANGTVPDKPLFRMSVARTTS
NSRYNFALTXGNEXGLFKVRTSSSYKRPSGIVYTAKELVGPKEYVIDLTLYLVRGRRKTS
YISRLYVFVAEYDL

Nucleotide sequence

Length: 5,822

>Boleac.CG.SB_v3.S81.g14448.01.t
TCAGAACTGGTATATATTCCTAAGTAGCTGCTATAAGTGACGCTAAGTAGGCACAGTTTC
GCCTTGTGACTGGAAGGCATTCTTTCAAGCAGAATTCAAAAGGCAAGATGTTCACNGGCT
TAAACATCGCCCTCTTTTTGGGAGTAGCTGGCTTATTGCCGTCGTTCTCTTATCAAAATC
CTTATCCGTATTATGGGCCGTACAGCAGGTCTAGAAGAGATCCTGCAGCATCATGGCAAA
CAGGCTACGGCCAAGCAATGCCACAGATCAATCCTATGGCGGCAGGTCAAGACCCTGGAT
ATGGCGCAAGGGGAATGGACAACCAGTTGGGAGTGGGAATGGGTCCATCATACGGGATGA
ATCGATACCCTTCGATGAATGGAAAAAATCCTTTACAGCCGATAAGGGGTGGAATGGATT
CACAGCGTTTCCGCGAAGGATCCCGACAGGAAGACGGTGCATCAGATCTCCCACCGCAAC
ACGGACAACGAGTCAACCCACCTCCACCAACGGGAGTACAGAGTGGGCCTTCGGGCTGTG
ACGGGGTGACATGTGATGATCTTAGCAATTGCATCAAAGTCGCAATGAACGAGTCTAGTT
GCTGTCCAAAATGCACCAAATATGGATGTGTTTGTGAAGGATACCAATTATATGACTGTC
AAAAGAACGGCTTCAGTGATGGAATGCTTCCTGAAGGAAAGTCGTACAAAGTAGCTGATG
GTACAACAGTTTGCTCGTGCCCTCCAGGAGGTGGCTCTATATTGTGCAGCTTCCGAGATC
CAACATCGTCGAGTTGTCCTGAGCTAACTCCGAANTGTATTCAACCATTTGTTCGCGAGA
TTGACGGTTGCAGTGAATGCGCTAAAGTCGGTTGTGTTGGAGACGACGGGGTGAAGGTCG
AAGCAGGATTGACAATAAATAAACCACCATGCTCGATATGCTATTGTCCACCAGCTGGTG
GGTCATTGATGTGCGGTGTGGATCCGAATTGTGACCAAACTAGTCAAAGAGGAACAGAAG
GAGGAAACCTGGCGCTTCAAAGTAACGTCAGAGAAATTGACTCATTCGGTCAAAGTAGAG
AAGCTAGCATGTATGGTTACTCTCCATACGGNGCGGGATATCCTGATTATGGCAGTCAAT
TTGGAATGCCTNGTGATGATGAATCTCCGGTTGTGCCACCACTATCTCCGGTAGGGTCCG
ACCAGACATCTCAATCAGGCGCGGAATCGAATCCTCCTAAATCAGGTGAAAGTTCTCAAC
TGATTCCAAATGGAGGATACGGTCAATACCAACAACAAGGGTACGGTTTGCCATACCAAA
ATCCATACCAATATATGGACTATGGGAGTCAATACAATAACTATCTCAGATCATACGGTG
CAGGATTTGGCAAAAATGTATATGCCGGAGCAGGATACCCAGATGCTTCGTCGAGCATGG
GGAATGCGCAGCAAGGAAATGCAGGATCTNCCCAGAAGGCAGCCGGAGCCACAAACCCCG
GTGATGACGCTGCGCCTTTGGCGCCAAAACAAGAAGGTCAACAGGCTATGTACGATGGTA
GACAAGGATATGATTCGTCATCCGCNNCCGTTCCTGGCAGTGATCAGCCACAGCAAGGAC
AGTCATACGGAAACCAAGACAAAGTACCAAGTGGAAATGGATTCCAGTCGGGCCAAAATT
TTGCTGGATATCCAATGCCGGGTCAGTACGGTGGACAGTATGGCGCGTATCCACCCAGTG
GAAATTTGCGGCAATATTACAATCAACGTGGCCAACAATCTGGACCAGATGATACGCAAT
CCGGAAGAAATTTACAAAGTACTGATTCTACTGGGAATGCTCTCGGACGCGACAGGGCCG
GCTCTCAATACGGAGGCGTCGACCAAGGACAGTATAGTCAGTCTGGAGCCAACCCCCCTC
TTCAGCCCCGTTACCAGTTTCAACACCCTTCAGTCGGGCAGGGAAGTAGATCGTCTGGCG
GTTCACAAATGATCCCAAGAGGTAGCGACGACGTACAGAGTCCAACTAGCAATGAAGGTA
ATATGCAGAATGTAAATCCCTATGCTCAAGTCGGACGCAAGCCCGACTCCGGCAGTAACT
CAGTGAATGTTCCGGATCCGGCTGCCCAGTTCGGTGAACCCGGAAGTAGAATCGCACCGA
AGGAATTAGGTCAGAATATCNGTCAAATCACACCACCATTGATGGCTCCTGGAAGTGACG
GAATGAATATGCAACCTCGATTTATTCCACCCCGTGAAAACGATGAAAGGCAATCAAGGA
AGACGAGAAACCATCACGGCTTTATTTTAAGAGGTCGGATTAGCCAAGAGCCATCAGCTG
TAACAACTACCACGACAGCTGCCACCACAACAACAACAACACCTAGGCCAACCACAACGA
CTACTACAACTACGGCAATACCAACAACCACAACGACCAAACCCACAACTACCACGACTA
CGACCAAGCCGACAACAACCACAACTACCACACCACCGCCAACCACAACTACGACGACGA
CAACAACAACAACTACAAAACCAACAACAGTTACTACAACAACGAAACCTACTACCACGA
CAACTACAACAAGGCAGACGACCACAAAATCCACTACAACAGAACCAATATCGAAATCGA
GGAGTGCTGAACGCAAAATTCGAGAAGATGAAAGGTTACTGATGGACTGTTGTTCCCACG
GTAAAATGTGGGCGGGAACTCATGATTCGTGCAGCGGCATCATACCCAGAAGAGTTCAAC
ATCAAGAATTATGTTTCTACGCACAGAAACAATGCTGCGAAGAAGCCAAGAGTGAGTCAC
AATGTCAAAATGGAATTACCGCCGCTAGGACGACCGGAAGTTGCGCAAGATCTGGTTCTC
AGGCATCGTGTGGGAACGACCATTTCACGACTTGCTGCGGTTGCTGTCAAATGGGACTAA
GGGCAAGAGAAGAAGGGATGTCATGTGAAACAAGGGTATTCGGTCAATCATGTGGAAAGG
CCTACACAAGATGTTGCCAACAGGGAGGCGCGGAAAGTCAGTCTCACACGGAGCCTCGTT
GTGCTACGCATGGTACTTGCCAGCAGATTTGTGTAGATACGATTAAAGGAATGCTTTGTT
CGTGCCGAAGAGGATACAAATTGCATAAAGATGGGATTTCTTGTGAAGATATCAACGAGT
GTGTGATTGGAACGCATACATGTACCGAAAACCAACTTTGCCTCAACCGACAAGGGTCTT
ACTTCTGCCAACGAAGATTGAGTTGCGGAACCGGGTACGAACTGACTTCAATAAATACCT
GCGAAGACATCGATGAATGTGCTCTNGGCGTACACGACTGTCTTGCAAGTGCCACATGCG
AAAATCAAGTAGGGTCATATGTTTGTATTCCCAAGGAATGCGATGCTGGCTACATCACAG
ANGCTACAGGGAGATGCATAGACATAAACGAATGTCGAATCCGAACCTTCACCTGTCCCT
TCGGTGCTTCATGTGTCAACACNGAAGGCAGCTATGAATGTGAGTGTCCGGCTGGTCTGC
GGCCTAATGATGAAGACACAATATGTGAAGATATTGATGAATGTCGGTTGGGAATATCTA
CCTGTAGCAAACGTGGAATATGTGTCAACACTATCGGAAGCTTTATTTGTCGAGAGCCAC
CCGCTCTGACATGTGGACGGGGCTATATGGCTGACGAATCAACAAATTCTTGTGTTGATG
TTGATGAGTGTACTGCTGGAACGCATAGCTGCAATGAAGGATCCACATGCATTAACGAAG
TAGGGGGATACCGATGTCAAGATCCTTTACTTTGCCCTGANGGAATGAAACCATCCGAAA
ACGAACGAGTTTGTGTTGATATAGACGAATGTACCATGCGTGTTGGTAGAAAATGCAATT
ATCAATGTAGAAATCTTCCGGGATCGTACGAATGTTTCTGTCCTGAGGGATATAAAGTTG
GATCATCACCAAATACTTGCGAAGATGTCGATGAATGCGCTAGTTCTCCNTGTTCTGGAT
CCGAGACTTGTTTCAATACGCAAGGAGGCTATAAATGTAAAGATCTCTCCTGTCCTACGG
GCTATAAACGATATTCGAACACGCGATGCAGTCGATTGNTATGTAGAGGAAAACCACGGT
CGTGTTTGAAATTACCGAAACANATTTCTCATCATAATATATCAGTCGCGAATGGAACTG
TCCCNGATAAACCATTGTTTCGNATGAGCGTGGCAAGAACGACTAGTAATAGTCGATATA
ATTTTGCGCTNACTAGNGGTAATGAAGNTGGTCTTTTTAAAGTGCGTACTTCCAGCAGTT
ATAAACGCCCGTCCGGAATCGTTTATACAGCTAAAGAGCTGGTTGGTCCGAAAGAATACG
TTATCGATTTGACTCTGTACTTGGTGCGGGGCAGAAGAAAAACCAGCTACATATCCAGAC
TTTATGTATTTGTCGCTGAATATGACTTGTAACGCTTCGAAAGCGTGTAAAACTGGATTC
GTCAGCTGCGTGGCTCCCCGATGTATACCGGGAGAGTGTGTTTATGTCTGTGATTGACCG
CGTTAGCAGTTGATTTGTATGTAAGCAACTGATCATATGGACAACTCACGGGTTGTGGTT
TTATCCAACCTTGCCTGACCAAATTTTCGGATTCATCACGAAATTTCGCACAGCAGAAAA
CGCCAAAATTGCAGTTTCATTAAATTTCGCATATCTCGTCACAAAATATACTTGAGCGCC
CACTGATTGCAGTCAATATATTTATATNCGTTCATCCTATTCGACATCTAGATTGCCAAT
TCCATGCGCTACCTAAAATTTTGTTCCTTTGTGATCATTGTCGCTAGAAGTTTCGAGAAA
TGTTCCATGTATTATGTATCTCTATAGCAGTCTAATCTGCGTAGGTTTGTATGCTTTTTC
ATACTTTACTATTGCGCTTTCCCAGTATTTCCTCAAGTCATCGCACTTACATGNGTCGTT
CAACTGAAGTCGGCTATACGCGATCTGTTCAAGCCACGCAGCTGTTCTTGTGGTATTGAC
TGAAGTCAACCAGTNTGGTATGTGGGTGCTTGTGCATGCGTATTTTGTTGCTGTGACTTG
TGAGAATGGAACTATTGACGTATTGGTTCAAGTCCAATTCAGTAGATTACTTTCTTGTTA
CATTTACACGGGATGTCATAAGGTCGTGTTGAGTCGCCACGCAGAGATGCCATTTCTATA
TTTCCAAAGTGAGGTCTCATAGACGCGAGACCTCTCCATGTAGCGTTCTTCACTACAGTA
TTGAACCCTGTTACACACATTGCAATGGGATTGCTTGTTGTTAATCACACCATGCCATCG
CTAAAGTTGTCTCCAATATGTGTGAATTTGGACTTGGTTGACATTTCTTTTCGGTGGCAA
AATGTTCGTGTTTGCGTTATGACAGCCCGAAGTGATCTCTTTTCAGTCAACAACTATATC
CCAACCTTCCGATCCTTATGTCGGGACCGACTGTGAGACTATATAAAATGAGCTGTTTGT
TGAACTTAGCCACGACATACAGTGAATTGGTCAAACTGGTGAGCAAATCGTTGCTCTTTC
GAAGATATATATGTCGTATTTTTCAATCTAATCGGATTCCAAAACATAAGTATTCTTTTT
AGTCAATTACCCTGCCTGCCTTATTATTATGTTTCTTATTGATATTATTATACTTCTTCA
CAATCAATGCTTTGTTTGCGATAATCTAACGTATCATTTGTAAATAAAACATCTGCTGGT
CAGAATTTCGCAATGCGAACGCGTGGCCAATCTTCACCTTTGATATTTTACTTACAGTAG
AC

InterProScan

PANTHER
Fibulin-2 (IPR037286) - T[142-303] 2.3E-166 - T[763-974] 2.3E-166 - T[981-1231] 2.3E-166 - T[1236-1450] 2.3E-166
SMART
Anaphylatoxin/fibulin (IPR000020) - T[861-897] 0.0089 - T[939-970] 0.82
ProSiteProfiles
Anaphylatoxin/fibulin (IPR000020) - T[939-970] 8.974
ProSitePatterns
Anaphylatoxin/fibulin (IPR000020) - T[939-970] .
SMART
EGF-like_dom (IPR000742) - T[984-1020] 0.03 - T[1024-1066] 7.7 - T[1070-1111] 0.55 - T[1115-1154] 0.0038 - T[1158-1203] 49.0 - T[1207-1250] 15.0 - T[1254-1292] 0.013 - T[1296-1335] 0.76
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[985-1020] 0.28 - T[1021-1066] 1.1E-5 - T[1067-1111] 1.7E-8 - T[1112-1154] 2.3E-10 - T[1155-1203] 7.6E-6 - T[1204-1250] 3.7E-7 - T[1251-1292] 1.8E-9 - T[1293-1335] 6.6E-8
Pfam
EGF-like_Ca-bd_dom (IPR001881) - T[1021-1061] 4.7E-9 - T[1067-1103] 4.8E-9 - T[1112-1153] 9.5E-11 - T[1155-1202] 1.4E-9 - T[1204-1249] 1.3E-10 - T[1251-1291] 5.6E-7 - T[1293-1334] 6.6E-8
ProSitePatterns
EGF_Ca-bd_CS (IPR018097) - T[1067-1093] . - T[1293-1317] .
ProSiteProfiles
EGF-like_dom (IPR000742) - T[1112-1154] 11.863 - T[1155-1190] 6.626 - T[1204-1231] 7.498 - T[1251-1292] 8.622 - T[1293-1335] 7.635
SUPERFAMILY
Growth_fac_rcpt_cys_sf (IPR009030) - T[1112-1253] 5.73E-12
ProSitePatterns
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[1129-1140] . - T[1267-1278] .
ProSitePatterns
EGF-like_CS (IPR013032) - T[1276-1291] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FBLN1_HUMAN 35.526 % 339 4.77E-101
FBLN2_HUMAN 33.333 % 300 5.38E-84
FBLN4_HUMAN 28.964 % 173 2.74E-46