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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S5...' > 
  2. EST 'AHC0AAA223YB18_RM1' > 
  3. Transcript 'KH2012:KH.C6.257.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Boleac.CG.SB_v3.S820...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S820.g14527.01.t

Possible name(s)

GTPBP1; GTPBP2; HBS1L

Gene model

Boleac.CG.SB_v3.S820.g14527

Location

S820 [7,093 / 15,898]

Sequences

Amino acid sequence

Length: 691

>Boleac.CG.SB_v3.S820.g14527.01.p
MGSSFILNCGWHIMTITKLCEKLSEENIKCEDELIFSSVCDFTSFGLKPWILDKMPVLND
QTLPTSVTCDMNQNLPNCTRNHEVKLTQKILGRNMLSEMDNETTHFPPEVCIEEEGNVEY
KLKLLDPTPCRIEHLITQMKWRLQEGQGEAIYKIGVEDNGLCSGLTDQEMEKTLTTLQQM
ADRLGADLSVLRRREVDCQALGERKTIAEVLVRKVLDRHQFLDLRVSVLGNADAGKSTLL
GVLTQGQLDNGHGEARLNLFRHLHEIQTGRTSCISHEILGFDGRGEIVNYSESRTAEDIC
ENASKIVTFIDLAGHHKYLRTTVFGLTSHFPDFAMLVISANRGIVGTTREHLGFALALNV
PTFAVVTKSDLCPTPIVDRTCRQLERLLTSPGSAKIPFQVKTIDDAITVGQMMTGEKSNV
VPIFRVSSVTGENLDLLKKFLNVLPPQRNAREQAKLMXKPTEFQVDQVFFVPDVGPVVAG
SLLRGTIKEDESLTIGPTTTGRFLPVTITSIRRNRAPCRDVRAGQGASLSLEGVEKDTIR
KGMVLISSDVERESFEAFDATVCLLYHPGKNLQNGFQTTVHVGSVCRTAIIEKIHNVEGA
LTTNEQATVTFRFVTSPEYIRVGSTLLFRERATKGIGQITKLYPFNCEHPNLVPSRRKVS
SSNSPQASPQTDHFSTALDDRTFPMSDATSQ

Nucleotide sequence

Length: 5,124

>Boleac.CG.SB_v3.S820.g14527.01.t
ATGGGCTCATCATTCATTTTGAATTGTGGATGGCATATTATGACAATCACCAAACTTTGC
GAGAAATTGAGTGAAGAAAACATCAAATGTGAAGATGAATTGATATTTTCAAGTGTGTGC
GACTTTACAAGCTTTGGCTTGAAACCTTGGATATTAGACAAGATGCCAGTGCTGAATGAC
CAAACGTTACCAACTAGTGTCACCTGTGACATGAATCAAAATTTGCCCAACTGTACAAGA
AATCACGAGGTGAAGTTGACGCAGAAAATACTGGGAAGGAATATGCTGTCTGAAATGGAT
AATGAAACCACACATTTTCCTCCTGAAGTATGTATTGAGGAGGAGGGTAATGTAGAGTAC
AAACTCAAACTTCTGGACCCAACACCATGTAGAATAGAACATCTGATAACCCAAATGAAG
TGGAGATTGCAGGAGGGGCAGGGAGAAGCTATCTACAAAATAGGGGTTGAAGACAATGGG
CTTTGCTCTGGACTCACAGATCAGGAAATGGAAAAGACTTTGACTACATTACAACAAATG
GCTGATCGGCTAGGTGCTGATCTGTCAGTCCTTCGTAGGCGTGAAGTTGATTGTCAAGCA
CTAGGAGAAAGAAAAACGATTGCTGAAGTGCTTGTACGCAAAGTGCTTGACCGCCATCAA
TTTCTGGACCTGAGAGTTTCTGTGCTTGGGAATGCAGATGCTGGTAAATCCACTTTACTT
GGTGTGCTAACCCAAGGACAGCTTGATAATGGCCATGGTGAAGCCAGGCTTAATCTGTTT
CGGCATCTGCATGAGATACAAACAGGCCGTACATCTTGCATAAGCCACGAAATACTTGGT
TTTGATGGCCGTGGAGAGATTGTCAACTATAGCGAATCTCGAACTGCAGAAGATATTTGT
GAAAATGCTTCAAAAATTGTAACCTTTATTGATCTTGCGGGACATCACAAATACCTCAGG
ACAACTGTGTTCGGACTTACCTCGCATTTTCCAGATTTTGCCATGCTAGTGATCAGTGCC
AACAGAGGAATAGTTGGGACCACACGTGAACATCTTGGGTTCGCACTTGCATTAAATGTG
CCTACTTTTGCTGTTGTGACTAAATCTGACTTATGTCCGACTCCAATTGTCGATCGAACT
TGCAGACAGCTTGAGAGGCTGCTGACATCTCCTGGAAGTGCCAAGATCCCATTCCAAGTG
AAGACAATTGATGATGCTATCACTGTTGGACAAATGATGACTGGAGAAAAATCAAATGTT
GTTCCGATATTTCGAGTATCAAGCGTGACTGGTGAAAATTTGGATTTGCTGAAAAAGTTT
TTGAATGTACTTCCTCCGCAACGNAATGCTCGAGAGCAGGCAAAATTGATGGANAAGCCA
ACAGAATTTCAAGTTGATCAGGTATTTTTTGTGCCTGATGTTGGTCCAGTAGTTGCTGGT
TCTTTATTGAGGGGTACGATAAAAGAAGATGAAAGCTTGACCATCGGCCCTACAACTACT
GGGAGGTTTCTGCCTGTGACAATTACTTCTATCAGGCGCAACCGAGCACCTTGTAGAGAT
GTTCGAGCAGGGCAAGGCGCTTCNTTGTCTTTGGAAGGCGTAGAGAAGGATACCATAAGA
AAGGGTATGGTTCTCATCAGCTCTGATGTGGAGCGGGAAAGTTTCGAGGCATTTGATGCT
ACGGTATGTCTACTGTACCACCCTGGAAAGAATCTACAAAATGGATTTCAGACAACAGTG
CATGTGGGCAGTGTCTGCCGGACGGCCATTATAGAAAAGATTCATAACGTTGAGGGTGCT
TTGACAACTAACGAACAAGCTACTGTAACCTTCCGTTTTGTGACCTCACCTGAATACATC
AGAGTTGGATCCACCCTCCTGTTCAGAGAAAGAGCNACTAAAGGGATAGGCCAGATCACA
AAATTGTACCCTTTCAACTGTGAACACCCCAATCTAGTACCATCAAGACGAAAAGTCTCT
TCTTCAAACTCGCCCCAGGCATCCCCACAAACTGATCATTTTTCAACTGCACTTGATGAT
AGGACATTTCCCATGTCAGATGCAACATCTCAATAGACCTGTATGCACCATTGAAAAAAA
TCTCATCAATCTAGTAGCTGTATCATCAATGATATATAANTATATCTTGTGAGTTGTTTA
CTCACAGTNCCAGACCAGTCTTGAAGATTACGCCGGGAAGTTCCATTGAGTTTTCATTTA
GCTATATAGCGATTGTCCTATAGCATTACACCAATTAGTTGAATATCTAGAACAAATTGT
AAATGCGTGACTTCAGTTTTTAGCCAATAATGTTCATACAAATTTATTAGCACCATAGTT
GAATATCAAGTGGTGACACTTGTATATTTTTGTAACAAAATTTTATCCATGTGTTATCAA
GCGACATGTTTTTTGAATNTTCAATGTGATGGTGCCTCAAATGTAATCACAAATTTGTGG
AGGAGACATAAGTCAAAACAAGTTTTGAAACAGGTTTTTAGAAAAGTTGGCAAATTGAGA
ATTCACCTTCCTAGAACCTGTTTTTTTCCTCGAATTGGTTNCTGATGATAACAGATCAAG
AAGTTGAGCTATGCTTTTGTCTTATATCCTTCATTTGAGCCACCATCACAATTCACCTTC
AGCCGAAATTGGCAAAGGTGTACCTTGNACATGAGCAGCCCGTTGCATTGGGTNGGGGAA
GAGATGCTTGAAATGTGTTTTTTCGCCAAATGAGATAGGCAACCAGTTTTCAATACTAAT
AATTCAAATGCACCGAAAGTTGAGCTGCAATGATCCTAACCTGTTTTCCAACAAACCCAA
ACTCAGTTTGTGTTGGGCATATGGAACAGTGCACACTTCACAGGCCACAGTCTCCAAACC
GCAATCCAAGCAANGTTTGGAAATCAGGCTAGCTCATACACAGTTCAACTTTCNGTGGAT
TGGACCCTTGCTGTGTTAATGGCCTCAGTACTTGTTCCAGGTTATGTAAGTGTCGTTTAC
TGAACCCTTCAAAATTTCTCAGCTATGTGTAAATCTGTGTTAAAGTTAATGTATCNGTTC
GTTTGTGACAAGGTCTGTGGCCTAGCCATCATACCCTCCATTATCCGAAATGTATTTTCT
GTGCACTTCAACTAGCTACTGCCCTTCTACACTTTTGAAGTGAAGGAAGATACATCTGTA
ACATACTGTGTGCATTTCATTCAGATCATTAGTTAAAGCTTGTTTGTTTGATTGAACTCA
ATACAGGATTTTGCGGATGGANNCCAAGCAGTACTGGTTTCCTTATTCAAGACAAGCTAC
TATCAGGGACGGAATTGACTGATTGATAGAATTGTTTTCATTTCATCATCACGGTCAAGT
GGAATGTCTAGGAAACCAGTGACATCACAGGGGGGGAAGACTTTAATGATTGGTTTCTCC
GGGCTTTTGATCCATAAAGATTCTATATGACCTTTAGTCCATGTCGAATTCACCATTATT
ACATCACAACAACGCCCAGCACAACCATAAATCCAAGCAAATATACGATAGTAGATTAGC
TTGGCGTTCGTTAATATAGTACTTTGAGCTATGACTTGGCGATTGTTGAAGGAGCCAGTT
CGATCCGAGACAATGCTCAACATATCAGTGCTGATAGTTGGGTANTGGACGTAGCAGGCT
ATCTTGCAGCTTGTAAATGCTTTGAAAACAAAGTATGACATAGAGTAACCCATACTATCA
AAAAACACATCGGGAACATAAGTGCTGAGGGCTTCGTAAGCCAGTATCATAGATCCGATG
CCTTGACCCAACAGAGTAAAGTATGGGTAGTGGTGAGCTTCAACCCATGTCCGTTTGTGT
AGAAAAATAAATTTGATTGGATGTGGAAGTTTGATGTTGAATTTGGTTGTAGCATGTGTT
AAAATTTCTTCTTCTGTAGCATCACAGTCTCCTGTGTAAACTATGCATTCAAATTCTGGA
TGGTTGAGTTGTAATGCCCGTATCGCACACCATAGTACCCGTTCACCACCACCACCTGCA
TTGCAGTACGGATGAAAAAATCCAATCACTGGTTTTTCATTCTTTTGTTCAAGTTTGTGA
TTAGCAAACTTTTGTCGAAGAAAGAATACCAGCACTACTATAAAGATTACTGCAAAGGCT
GGGCATAGCCCCAGTAACAGCAGGCTAGGTAAAACCATGCTCTGTAAAATGAATGAAAAA
CATCAGGCATGAAGGACTCCAAATTCACCAAGCAAATCATGGATCGTGATTTATTTAATA
ACAGGAAAATTCAACCTGAATCAACAGCTGCCTATGNCGTCTTGCTTATCAAGACNATTT
TTAGTAATCTGCTTTTGCTGATAAAGCNATGATGCTGAATCGAGCNTCTTGGGGGTCTCT
TTCCATAAATTTCCTGCAAACATCTGCGGCAGCGATCATAAAATCATCATCAGTACATTT
TCCATGCAATATTGGAGTGTCTTTTCTTCCATCTAATTCGTAAACGTTACCATCAACATT
CACAATAGCAACAAAATGAAGATCAACATCTTCGTTGGCACCAACAGCTTGAGATTGTCC
TTCGTTGGCACTGACTTCATGNGCATCACAGATATCTTGATCCTGTTCTAAATGCTCCCC
GCNCAGTTTTGGTGGTAATTTATCAACTGCTTTGAAAAATGAATCAAGAACAGTGCCTTC
CTCGACAAAACCTTGTCGGTGACGATTATTGCCGATACTGTGTATAAGTCCGATTGTGCC
ACAGGCATTTCCAATCGTCTGCTTCATGAAGAACACATTCTCATTTGTTGGTATTGGTGG
ATCTTGCGCCTTGCGAGAACTCTCATCGTTACAGTAATTTCTATAGTTGTCAGTGATCGG
AAACAACAAAATNAAGGCGCAACACGGCTGTGGAACCATATCCAGCAGTTCAAGCGAATA
AACGTCGGTAAATGCCCATTGCGATGACATGCCAATGCTTTGGGCATACTTTGTCATGAC
CTGAGGATTCGCCTCCAAAGGCTGCCATCTTAAATTGGACATTTTGACGACTGTCGCGCT
GCGGTTTCTCTTCTGAATTCTGTAGAAATAGCGAAACGGGCAATATACCGATGACAACGG
ATCGCTACCGATATTTTGGCTTCG

InterProScan

ProSiteProfiles
TF_GTP-bd_dom (IPR000795) - T[221-450] 35.572
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[224-475] 6.53E-28
Pfam
TF_GTP-bd_dom (IPR000795) - T[225-445] 2.0E-20
CDD
GTPBP1-like (IPR035531) - T[225-446] 1.17982E-118
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[458-567] 3.09E-15
Pfam
EFTu-like_2 (IPR004161) - T[475-545] 9.6E-9
SUPERFAMILY
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[557-643] 8.84E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GTPB1_HUMAN 46.486 % 486 9.4E-164
GTPB2_HUMAN 59.259 % 647 0