Aniseed - Transcript Card

Transcript 'Boleac.CG.SB_v3.S821...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S821.g14535.01.t

Possible name(s)

RDH11; RDH13; RDH14

Gene model

Boleac.CG.SB_v3.S821.g14535

Location

S821 [3,023 / 7,045]

Sequences

Amino acid sequence

Length: 289

>Boleac.CG.SB_v3.S821.g14535.01.p
AYVPYLLEFVIMAAKQKTVISGMVNKDIKMTGKTVLITGANTGMGLATAIDMAKRGARVI
MTSRNMERGNEAKETVVKESESEIVFVKQLDLSSMDSIRALAEDVNSSEERLDVLINNAG
VMMCPQSKTKEGFEMQFGVNHLGHFLLTHLLLDLIKKSAPSRIVTLSSGMHRKFLGAKIH
WDDINLEKSYTPSKAYAQSKLMNVLFSRELAKHLEGTGVTTYVVDPGAVKTDLQRHVGTH
ENPSFMDRLLSGVTWLSRRFWRTPEVGAQTEIYCAVAPELANQTGRFYV

Nucleotide sequence

Length: 870

>Boleac.CG.SB_v3.S821.g14535.01.t
GCCTACGTACCTTACCTCCTGGAATTCGTCATAATGGCAGCGAAGCAGAAAACCGTGATC
AGCGGTATGGTCAACAAGGATATCAAAATGACGGGCAAAACCGTTCTTATCACTGGAGCA
AACACTGGGATGGGTTTGGCCACTGCAATCGATATGGCAAAACGAGGAGCACGAGTCATC
ATGACAAGTCGCAACATGGAAAGGGGAAATGAAGCAAAAGAAACAGTTGTGAAAGAGTCG
GAATCCGAGATAGTCTTTGTGAAGCAGTTAGATTTGTCTTCCATGGATTCCATTCGTGCA
TTAGCCGAAGACGTCAACAGTTCGGAGGAGCGATTGGATGTGCTTATAAATAATGCAGGT
GTGATGATGTGTCCTCAGTCTAAAACAAAGGAAGGCTTTGAAATGCAGTTTGGTGTGAAT
CATCTGGGTCATTTTCTGTTGACCCATCTACTCTTGGACTTGATCAAGAAAAGCGCGCCA
AGCCGCATTGTTACATTGTCATCCGGAATGCATCGCAAGTTTCTGGGTGCCAAAATACAC
TGGGACGATATCAACTTGGAGAAAAGCTACACTCCCTCAAAAGCATATGCGCAGAGCAAA
TTGATGAATGTCTTGTTCTCAAGGGAACTTGCCAAACACTTGGAAGGTACCGGTGTTACT
ACCTATGTTGTTGATCCCGGCGCTGTAAAGACTGATCTTCAAAGGCACGTTGGAACACAC
GAAAATCCGAGTTTCATGGATCGGTTGCTCTCTGGAGTGACATGGCTCTCCAGACGATTT
TGGCGGACACCTGAAGTTGGAGCACAGACAGAAATATATTGTGCTGTGGCACCCGAGTTG
GCTAATCAAACTGGGAGATTTTATGTGTAA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[30-288] 4.17E-56
Pfam	SDR_fam (IPR002347) - T[33-170] 1.4E-26
PRINTS	SDR_fam (IPR002347) - T[34-51] 8.4E-15 - T[110-121] 8.4E-15 - T[196-215] 8.4E-15 - T[217-234] 8.4E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	48.029 %	231	9.83E-75
RDH13_HUMAN	46.125 %	229	6.6E-74
RDH14_HUMAN	48.529 %	234	9.04E-76