Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S82.g14514.01.t

Possible name(s)

NOG

Gene model

Boleac.CG.SB_v3.S82.g14514

Location

S82 [169,468 / 170,119]

Sequences

Amino acid sequence

Length: 216

>Boleac.CG.SB_v3.S82.g14514.01.p
MIAIDLCAGNPSFKQYNPKIIPDSSNDLPVLDIKEAPPKDSDPKEADLDPIRLRQKLGSA
FQKDFMSIEMPDLDMTANTQNSLIERLRGRPPSWIRRIDLFDSIKNGRHGVSINKRQKKK
IQLWLWQTTRCSVIYNWKKLHYRYWPPWIKVGSCDDSKSCSLPVGMGCQPKEKMSITLLR
WHCQGISEANDMEYCTWIKMQYPIISECKCKCKSNS

Nucleotide sequence

Length: 651

>Boleac.CG.SB_v3.S82.g14514.01.t
ATGATCGCCATTGATTTGTGCGCGGGAAATCCATCATTCAAGCAGTACAATCCTAAGATC
ATCCCCGACTCAAGTAATGATCTTCCTGTTCTTGACATCAAAGAAGCGCCGCCGAAAGAT
TCTGATCCAAAAGAAGCCGATTTGGATCCTATACGACTCCGGCAAAAACTCGGATCAGCA
TTTCAAAAAGATTTCATGTCAATCGAAATGCCAGATTTGGATATGACCGCAAATACACAG
AACAGTTTGATTGAGAGACTTCGAGGTCGTCCGCCAAGTTGGATACGTCGGATAGACTTG
TTTGACTCCATCAAAAACGGACGACATGGCGTTTCAATCAACAAAAGGCAGAAAAAGAAA
ATTCAGTTGTGGTTATGGCAAACCACTCGCTGTTCGGTTATATACAATTGGAAGAAATTG
CATTATCGTTACTGGCCACCTTGGATAAAAGTAGGTTCTTGTGATGACTCAAAATCATGT
TCACTACCGGTTGGAATGGGGTGCCAACCGAAAGAGAAGATGTCTATCACACTTTTAAGA
TGGCATTGCCAAGGCATTAGTGAAGCTAACGACATGGAATATTGCACATGGATAAAAATG
CAGTATCCTATAATTTCGGAATGTAAATGCAAATGCAAAAGTAACTCTTAA

InterProScan

PIRSF	Noggin (IPR008717) - T[3-214] 1.2E-56
PANTHER	Noggin (IPR008717) - T[14-212] 1.2E-58
SUPERFAMILY	Cystine-knot_cytokine (IPR029034) - T[21-212] 3.71E-44
Gene3D	Cystine-knot_cytokine (IPR029034) - T[32-75] 4.1E-52 - T[131-212] 4.1E-52

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NOGG_HUMAN	35.268 %	150	3.09E-45