Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S845.g14698.01.t

Possible name(s)

RPAP2

Gene model

Boleac.CG.SB_v3.S845.g14698

Location

S845 [20,208 / 21,522]

Sequences

Amino acid sequence

Length: 437

>Boleac.CG.SB_v3.S845.g14698.01.p
MQSPDHKGNYYSWRKWHEEKAHENVKALILNPISKDFFMNSLKTLSXQHYEDVTVERSLS
NTCGYCLCDKELPPVPLQTYKIVKNRVYDLSVRNRFCSNRCYSISHKISEQIPSTPLWLR
VHGNMTEVDIAFDHEGLGEEIILQPHTLRLDYLDQEDVLESSCPAEDVESPDIPLTIEPS
PICTKAKAVQSHPGMVMNPKVEKYANTEKVLIEGGHILRSWVTESTLKFLFGSADNTVPK
SKVSVSLHMGKHDVTQSALTTSKPQNSLQMKSLEHDLKYEESDCQYEDRVSNFFGKRXAS
AVSSLERQEQPSISTVHPHQSETRYVRENIVVKQVLRVVDDLSPSLXNIIPELKTFVKTL
NLTKLNVVLHVELWPMLTISMLYLLSLKNSALENILTSDEFGKVLQKILSVYGTNMSSLK
QIVLEVPMLQKYYAHVS

Nucleotide sequence

Length: 1,314

>Boleac.CG.SB_v3.S845.g14698.01.t
ATGCAGTCTCCAGATCACAAGGGAAACTATTATTCATGGAGAAAGTGGCATGAGGAGAAG
GCTCATGAAAATGTCAAGGCCCTCATACTNAATCCAATTTCAAAAGATTTTTTCATGAAC
TCNTTAAAGACACTCTCAAGNCAGCATTACGAAGATGTCACTGTTGAACGTTCGCTGTCA
AATACTTGTGGATATTGTCTNTGTGACAAAGAACTGCCACCTGTCCCACTACAGACATAC
AAAATTGTGAAAAACAGAGTTTATGATTTATCTGTGAGAAATAGATTTTGTAGCAACCGT
TGCTATTCTATTTCACATAAAATTTCAGAGCAAATTCCAAGTACTCCTCTTTGGCTGAGA
GTCCATGGAAATATGACTGAAGTTGATATTGCTTTTGACCATGAGGGATTGGGAGAAGAA
ATTATCTTGCAACCTCATACTTTGAGATTGGATTATTTGGACCAGGAAGATGTGCTGGAG
TCTAGTTGCCCTGCAGAGGATGTTGAGAGCCCTGATATACCACTCACTATTGAGCCATCA
CCAATATGCACTAAGGCCAAAGCTGTACAATCACATCCAGGCATGGTTATGAATCCTAAA
GTTGAAAAATATGCGAACACTGAAAAAGTACTGATTGAAGGAGGACACATTTTGAGGAGT
TGGGTCACAGAAAGTACCTTAAAGTTTCTTTTTGGAAGTGCAGACAACACAGTGCCTAAA
TCCAAAGTTTCAGTAAGCCTACATATGGGCAAGCATGATGTGACACAGTCAGCACTAACA
ACATCCAAACCCCAGAATTCCTTGCAAATGAAATCGTTGGAGCATGATTTGAAGTACGAG
GAAAGTGACTGCCAGTATGAAGATAGGGTGTCGAACTTCTTCGGGAAAAGACANGCGTCT
GCAGTCAGTAGTCTGGAGCGCCAGGAGCAGCCCTCGATCTCTACAGTACATCCCCACCAG
TCTGAAACACGATATGTTCGAGAAAATATAGTCGTGAAACAAGTGCTAAGAGTAGTGGAT
GATCTTTCTCCGTCGCTGNCAAACATTATTCCTGAGTTGAAAACGTTCGTAAAGACATTG
AACCTTACCAAACTGAATGTAGTGCTTCACGTTGAATTATGGCCAATGTTAACGATATCA
ATGTTATATCTGCTGTCCCTTAAAAATTCTGCCCTGGAGAATATTTTGACCTCGGATGAG
TTTGGCAAAGTTCTCCAGAAAATCCTAAGCGTGTATGGCACCAACATGTCGAGTCTGAAG
CAAATTGTGCTGGAGGTACCGATGCTACAAAAATATTATGCACATGTTAGCTAA

InterProScan

Gene3D	Rtr1/RPAP2_sf (IPR038534) - T[7-148] 3.6E-22
ProSiteProfiles	Rtr1/RPAP2 (IPR007308) - T[40-121] 17.132
Pfam	Rtr1/RPAP2 (IPR007308) - T[44-112] 1.0E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RPAP2_HUMAN	44.762 %	93.2	2.87E-20