- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Boleac.CG.SB_v3.S871...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S871.g14912.01.t
Possible name(s)
USP2; USP50; USP8
Gene model
Location
S871 [32,041 / 35,809]
Amino acid sequence
Length: 1,255
>Boleac.CG.SB_v3.S871.g14912.01.p
MDKVKLYIASSVGELNDKGNYQYDANRSMKIHINSSETTFKAAEEARLKKDEERAYVLYM
RYIDIYRKVKQSREFKKDXDHFGLLLGTKKVTEALTHAEILNKSLKKRYEDAKSEKNSAK
NEQNLSQELPNGITLPKTDPTKNKPESTINKAVAEKPIVSKDAKSITCGILHKIQFSKSA
KDYKVLIIDIRNESSFEQSHVRHDDCINVXGSLLTPGTICQRIQTGITNXDHLKRWKNRA
EYNLIVMVXWFCEEKDLQXQQNPLRCLLDALHKWEQSIFLQHAPVVLSGGYADWVEFYPQ
LTTNPRIEIPKKEKPGVVSITALSDVDFSSLLAPKKVTTDAEIXPNDVTNDIKANGDVLN
GSDVIDXXENMTSPTSQPXNDXFANWKISXASSIIASSTFGNDTTNXPESKSNIFQPPER
TKSVPVVNRATKPGTVQPSISSPPPKKNDYWDSIFSDXEKSSGQELSQKNPPAKPPAITD
TKPESSIYNSSIMDMQNRLEEAKKKKEEXEAKRRELEEKMKLFELEQETKRLEKEAEEEE
KRRKQAEKDLAMKMRGLRPXDEKQKTHEPAASGDKNQPDKLVIVPVPDTNSTSNGNASSI
VKAVEPKEPVYKAVRPLPELTNEKSTPSSVKKVDSEAIKMNKNAENSLEKDVTATPAEQT
PVKPVSTSSNQSTKTTTASTPNVQDNNPPAADQIPPKVIPNRNDKPVVGTQQESAKPKNE
ASSVVVPKPSQNSRQVANRDAKPATSASNMTVKPSRPLPTPQPSKPAISKPKTPSTSSAA
NYDSAPDKNALTLSTSLPMNWEKRLDKNTGRYFYLDHNTKTSHWNLPSNVNVKRPTKIVX
LKDEPSSSSGGLKXSSSTPNIAQLVDEQPAKPLKPTVNRSSKPALQKPEDXLDPPDVYTR
NLXLLHPNXGGRGPGQCGLYNLGNTCXMNSVLQCMFSTSLLAEYFLTNXFXHDMNRENFL
GSGGEITDGFAVLMKAVWNGKFKNXTPXDFRNTXGRFNTRFSSYSQQDSQELLLFLMXGL
HEDLNLIKKREYKEEDDNDNXSXEQAAQMAWDFHKRLNKSIIVEXFQGQFXAATQXXHCR
KTSRKFDVFMYLSLPLPSRGSCSISECLDKFSEVEKLSGDNKWFCPNCKQDRDAVRKMSI
WKLPPVLLIHLKRFSFSGRWGDKLQSNVSFPSTNLDINKYVIGKKSKSFNLYAVSHHHGA
TMDSGHYVASCKNPTNGNWYKYDDHEVSKTSVPNGASAYILFYTRIPHTLSLTSS
Nucleotide sequence
Length: 3,768
>Boleac.CG.SB_v3.S871.g14912.01.t
ATGGATAAAGTTAAATTATACATAGCCTCATCTGTTGGGGAGTTGAATGATAAAGGAAAC
TATCAATATGACGCTAATCGTAGTATGAAAATTCACATCAACTCGAGCGAAACAACATTT
AAAGCTGCGGAAGAAGCTCGCCTTAAAAAGGACGAAGAAAGAGCCTACGTGTTATATATG
AGATATATCGATATTTATCGAAAAGTGAAACAGTCACGAGAATTCAAGAAAGATNCGGAT
CATTTCGGTTTGCTACTTGGAACGAAGAAAGTTACAGAAGCTCTCACTCACGCGGAAATT
TTAAATAAAAGTTTGAAAAAACGCTATGAAGATGCTAAAAGTGAGAAAAATTCTGCGAAA
AATGAACAGAACTTAAGTCAAGAGCTACCTAATGGCATTACCCTCCCCAAAACTGATCCT
ACAAAAAACAAGCCAGAATCTACAATTAATAAAGCAGTTGCCGAAAAACCAATTGTTTCA
AAAGATGCTAAATCCATCACATGCGGAATTTTACATAAAATACAATTTTCAAAGTCTGCA
AAAGATTACAAAGTTTTGATTATCGACATCAGGAATGAGTCCAGTTTTGAGCAGTCGCAC
GTTCGACACGATGACTGTATAAACGTTNCNGGTTCTCTTCTAACCCCGGGCACCATATGT
CAAAGAATTCAAACTGGAATAACAAACNCAGATCATTTAAAACGATGGAAAAATCGAGCT
GAGTATAATTTAATAGTCATGGTTNATTGGTTTTGCGAAGAAAAAGATTTGCAANACCAA
CAAAATCCACTGAGGTGTTTATTAGACGCTCTTCATAAATGGGAACAGAGTATTTTTCTT
CAACACGCTCCNGTGGTTTTATCNGGAGGTTACGCCGATTGGGTCGAATTTTATCCGCAA
CTAACGACAAATCCAAGAATTGAAATACCGAAAAAAGAAAAACCAGGTGTTGTCAGTATC
ACTGCATTGAGTGACGTCGATTTTTCGTCATTACTAGCACCNAAAAAAGTNACAACAGAT
GCTGAAATCNAACCGAATGATGTAACCAATGACATCAAGGCAAACGGTGATGTGTTAAAT
GGTAGTGATGTCATTGATGNTGNTGAAAATATGACATCNCCAACTTCACAGCCAAANAAC
GATANTTTTGCAAACTGGAAAATTTCAAANGCATCGTCTATAATCGCAAGTTCTACTTTT
GGAAACGACACGACCAACNGTCCAGAGTCAAAATCTAATATCTTCCAACCACCGGAAAGA
ACAAAGAGCGTTCCAGTTGTCAATCGAGCCACAAAGCCAGGCACCGTCCAACCATCAATC
AGTTCTCCACCTCCTAAAAAGAACGATTATTGGGATTCAATATTTTCAGACTTNGAGAAA
TCAAGCGGGCAAGAATTGTCTCAGAAAAACCCACCTGCAAAACCGCCAGCAATCACCGAC
ACAAAACCCGAATCATCAATTTATAACTCATCTATTATGGACATGCAAAACCGTCTGGAG
GAAGCAAAAAAGAAAAAAGAAGAGGANGAAGCGAAAAGGAGAGAACTGGAAGAAAAAATG
AAGCTGTTTGAGTTGGAACAAGAGACAAAACGNCTAGAAAAGGAAGCGGAGGAAGAAGAA
AAACGAAGAAAACAAGCAGAAAAGGATCTCGCCATGAAAATGCGTGGACTGCGTCCANCG
GATGAAAAACAGAAAACTCACGAGCCAGCAGCATCAGGTGATAAAAACCAACCTGACAAA
CTTGTCATCGTACCGGTACCTGATACGAACTCCACATCAAATGGAAATGCTTCGTCAATT
GTCAAGGCTGTAGAGCCTAAGGAGCCTGTTTATAAAGCCGTCCGTCCATTGCCTGAATTG
ACTAACGAAAAGAGCACTCCGTCATCTGTCAAGAAAGTTGATTCTGAGGCGATAAAAATG
AATAAAAACGCTGAGAACTCTCTGGAAAAGGATGTCACTGCAACACCTGCAGAACAGACA
CCAGTAAAACCGGTTTCAACCAGTTCAAACCAATCTACAAAGACCACGACTGCATCCACA
CCTAACGTGCAAGATAACAACCCACCTGCTGCTGACCAAATCCCTCCTAAAGTTATCCCC
AACAGAAATGATAAACCAGTTGTTGGAACCCAGCAAGAGTCTGCAAAACCAAAAAACGAG
GCCTCTAGCGTCGTTGTACCCAAGCCGTCTCAAAATTCTCGACAAGTTGCAAACAGAGAC
GCCAAACCGGCTACATCTGCATCTAACATGACTGTCAAACCATCCCGTCCATTACCGACC
CCTCAGCCTTCNAAACCAGCAATATCGAAACCAAAAACGCCATCAACATCAAGTGCTGCT
AATTATGATAGTGCGCCTGATAAAAATGCACTTACGCTCTCTACGAGTCTCCCTATGAAC
TGGGAGAAGCGTCTAGATAAAAACACCGGTCGATATTTTTATCTCGATCACAACACGAAA
ACATCGCATTGGAATTTACCGAGCAATGTCAACGTAAAACGACCTACNAAAATTGTTNGT
TTGAAAGATGAACCGTCCAGCTCATCAGGTGGGCTCAAAAGNTCAAGCTCGACTCCAAAT
ATCGCTCAATTGGTCGATGAACAACCNGCAAAACCGTTGAAACCGACTGTGAACCGTTCT
TCAAAACCTGCATTGCAAAAGCCTGAAGACTNTTTAGATCCACCAGATGTCTACACTCGC
AATTTGNCCCTACTNCATCCAAACTANGGTGGNCGTGGACCAGGGCAATGTGGATTATAC
AACTTAGGTAACACATGCTANATGAATTCAGTGTTACAGTGCATGTTCAGCACTTCTCTT
CTCGCGGAATACTTTCTCACGAACGNGTTTAANCATGATATGAATCGTGAGAATTTCCTA
GGATCGGGTGGTGAGATAACCGATGGGTTTGCCGTTCTTATGAAAGCAGTTTGGAATGGA
AAATTCAAGAATNTAACGCCANGAGATTTTAGAAACACNATNGGTCGGTTCAACACTAGA
TTCTCTTCGTATTCACAACAAGATTCTCAAGAGCTGCTTCTCTTCTTGATGGANGGCCTA
CACGAAGATTTGAACTTGATCAAAAAGAGAGAATATAAAGAAGAGGATGACAATGATAAC
NTGTCNGANGAACAAGCTGCGCAAATGGCGTGGGATTTTCACAAACGGTTGAACAAGTCN
ATCATAGTCGAGTTNTTTCAAGGCCAATTTANNGCNGCTACGCAATGNNTNCACTGCAGG
AAAACATCAAGAAAATTTGATGTATTTATGTATCTTTCATTACCACTGCCATCTCGGGGA
AGTTGCTCGATTTCTGAGTGCCTTGATAAATTTTCGGAGGTCGAAAAGTTGAGTGGGGAT
AATAAATGGTTCTGCCCGAATTGCAAACAAGATCGCGATGCTGTGAGAAAAATGTCAATC
TGGAAACTTCCTCCCGTGCTCCTAATCCACTTGAAGAGATTCTCCTTCTCAGGACGATGG
GGTGACAAACTCCAAAGCAACGTCTCATTTCCTTCAACGAATCTCGATATTAACAAGTAT
GTTATCGGGAAAAAATCGAAAAGTTTCAATTTATACGCGGTATCGCATCATCATGGAGCC
ACAATGGATAGTGGGCATTATGTAGCGTCATGCAAAAACCCCACAAATGGTAACTGGTAT
AAATATGATGATCATGAAGTATCTAAAACTTCAGTTCCGAACGGGGCGAGTGCGTACATT
TTATTTTACACGAGAATACCTCACACCTTGTCCTTGACAAGTTCTTGA
| Pfam |
USP8_dimer (IPR015063) - T[4-111] 2.1E-20 |
| SUPERFAMILY |
Rhodanese-like_dom_sf (IPR036873) - T[160-307] 1.49E-13 |
| Gene3D |
Rhodanese-like_dom_sf (IPR036873) - T[164-308] 1.3E-26 |
| ProSiteProfiles |
WW_dom (IPR001202) - T[795-829] 14.205 |
| SUPERFAMILY |
WW_dom_sf (IPR036020) - T[795-827] 2.86E-9 |
| SMART |
WW_dom (IPR001202) - T[796-829] 1.3E-8 |
| Pfam |
WW_dom (IPR001202) - T[797-827] 7.6E-10 |
| CDD |
WW_dom (IPR001202) - T[800-827] 4.38158E-6 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[917-1243] 7.2E-66 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[917-1246] 53.465 |
| ProSitePatterns |
USP_CS (IPR018200) - T[1189-1207] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP2_HUMAN | 34.421 % | 196 | 5.48E-53 |
| UBP8_HUMAN | 45.726 % | 421 | 6.56E-128 |
| UBP50_HUMAN | 34.219 % | 179 | 9.46E-50 |