- Transcript 'Boleac.CG.SB_v3.S87....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S87.g14886.01.t
Possible name(s)
NCOR1; NCOR2; RCOR3
Gene model
Location
S87 [107,511 / 138,712]
Amino acid sequence
Length: 2,424
>Boleac.CG.SB_v3.S87.g14886.01.p
MKPSKQYRNEVGDPSSIQRGSNQLISGMGATPSPHLVYLTPQHQAPGFGGQSSMGSPHHM
ARDFHHLPPEALGTHPQLHPAGMPPRRRTSGHRLSLLRDIGVAGERDRAESSSHTNLSHG
YTTSTPIMYGGRPVMTMMSSLGGHQHLQKQQPPSSVSPQPSPSTQHRHVPVPAAQHSRSS
SLHVYPAGSTQFLLPGPTSIKTEPTAGSFIKEETKSPMHAVAPHYSNQLIRSQPYTGMQQ
QNQGPVTKNEPTETSNMPSKDSLLQAMEKVDKEIQKVTNEMKSLERKQQQLEEAAKKPAV
PEKTDSPKKVDTKHKDLWQRKAEAAKSQLDGLGPRYDMPLYNQPSDTKVYHENLKKNEEM
RPKLLAYFQHRRQLSNIRERYLCARXDLLMGEWQKKTERIENNIKRKGKETKVREFFEKQ
FPEIRKQREQQERFSRSGTRGDTCRSDADFNEIVDGLSEQEHQEQHMRQLAVVPPMLLDR
DERKLKFINNNGLVIEPMDDYKKRQELDHWNSQEKQIFKEKFIQHPKNFHVIASCLEKKS
VNDCVLFYYLSKKSVGYKALVRKISXKSKKVKPGRNQASALASSSDVAKTGQSADKIDRD
SDMKGESLDMIMKVEEAERIDKPPSPRMTRSRNKNLNWNDEDISTXKDGFGKHGKDFAAI
SRLFTNKTEQQIKQFYQSYKKKYNLDQLISDGKKKKPEGSRRTRTQVATPSSESSTTPPI
EESATKDDNQPKSADIENEMAEVSETLXKRKKELEEDQKNSDSQKAEAASIPEAETGKSS
SATSQIRTRRSAVNTGNADSNKTQAPKRTTDGPSGDEPAEKKAKKVKTTKDTKPDKELQE
EEEEKSLDAKVEAGKTDNSPPSEADHEDARVKAAEVRTEPKVMATITAEQTEPIVTKLEV
KPSAPSVKTTAPPVVEQKQPNPPEITTAVAPSPGIMIESNDKADTKPPTKSVIKTHKDGD
GDSSATCSADEEPNLQDVTAKRHVDSPYAFEEESSASIKLETSRTAMPPAPVVANIIKQP
APVTTSAEGNRPASTHAPGQVVNLKQDAKRPQSLPPPPSVVPIATLTFNPRMKATHKSDL
ITDRIPDAAEFRHMLQNPPRSVPAPRQEKPASSEPCRIDLTGSSSEENAPSKKGIDKTKR
PQLMQKPAHYHPVPMQAESLRKDFIPTKTSPSKALPDMPEMQYRKYTAADLDAMKERAAV
IPVSSLRVPMTSSMTKEPAKVEHPIKREIIHPRTEHLQYQKPYHPLQQPMLMQTHPTTTI
GRSVLTTSSIPTKFVSGAISSGPLHGGPIQSLLYDPHRPEVSALVQNIHQMRDPNPYSRH
PAIETTPVSRTSIVKMASGHIPVDAERPVIIPDDSRKPKVVQGSIMTGQPVQRPHEERTE
RMETMLGKRVIVKPPPRASPIPEHSRMHEAHMHGLRYPQPDVHQKRMGSILEGTPVVQRK
PSDDSNPSLSPTANPAMLMRRSPTVLQSAQKQVERRGPNEPDRAIDPHRGYSYINPEAMK
KEVVDHYQSARQALDKGREASSQSASMRRTPTGHVPQPAPVKKEIQSPQTPEEMMRRPHI
APSPYEMYQIPGLPGAPPDLARLGVQRIPLTSPGVSPDLLEVIRQYGRAGGVGGPPLYPL
FLPGLPYPGLYPHLGPMPHPGASGNPQNDNTRDVTSKMLNQDFKTAQLMMSKAPATLPGA
PQLTPAAAAAVLSASALGVPPIVVTTPGPFHHLAAAYPQGALTGDRINFIPANPAMARSP
FSPQFPPSGRSSAESNRSPSHRPSNPASPDLTRHRHSSGDMPREFANHPAVKGRNSPGSP
YSHRTSRSPQRYQTNTPQSQLSPTHLQSKPYPHYPHPSASPSRQPSKSPHVIPGMPTHAY
IDPNHPVHMHESHPSLRGKLARNDSLDNNSIPKLDRPRPESAGPYVRSLPQSPIENPEPN
PKYSHSRQSSDSLRYRTEPKRDQSHPPHLLSHEQKSHMRDERTFPPSHQERVSQRESPRP
KHHPSDGRSDARLAQQQPTILSNPAFHAAYVHQAMKRDSQSPSRSKERRADSPKDHRRAD
PGNGRENETSSNPGEDLRTCGKTKMKAGALINHIINMNFPSQPEPPPKPTTPVHDQARSK
TGEVVRASDMPNQRTTSSRSPMPFIPTQPAPPARHVIDSDRAALLYPLAGPQSLTLARHS
HDVIDHYYRQNMESPSRTASPASKPTIIPTEPISPDTHVSSKQEQKTVAPQFQPQPQRFV
TPAEARPRMDVPADAIRPAITRPQVPHHAVLPLSAMPGPAASASLEDIIREALMTNDGSP
ASSDSHHLSKAQDFRYPVNDLFLSHAALASLPPSLVSQYASVASARNLMPKQMHTEERKG
QAGTAPPPQAQSGSEKYMSALMFRPSPAAPPAAPLRPEQQQYYQPPTRHAMPAASQSPVP
QDANQSSQSRQIHRPQYEALSDSD
Nucleotide sequence
Length: 7,897
>Boleac.CG.SB_v3.S87.g14886.01.t
AGGATTTTTGCGCAGTTGCAGCAAAGCTCGCGGGACGCTGTTATTTACCGATAATTGACT
GTAAATGGATTAATCTGCACTGATGAAGCCATCTAAGCAATACAGAAATGAAGTCGGTGA
TCCTTCGTCAATCCAAAGGGGAAGCAATCAGCTCATCAGTGGAATGGGGGCAACTCCATC
TCCACATCTTGTCTACCTGACACCCCAACATCAAGCCCCAGGTTTTGGAGGTCAAAGTTC
GATGGGAAGTCCTCATCACATGGCTCGTGATTTTCATCATCTGCCACCTGAAGCTCTCGG
AACGCACCCGCAGTTGCATCCTGCTGGTATGCCTCCACGAAGAAGGACTTCTGGGCACCG
TCTGTCTTTACTTAGGGATATTGGAGTAGCAGGAGAGCGTGACCGCGCTGAATCATCATC
TCATACAAATCTTTCTCATGGATACACTACTTCAACCCCTATCATGTACGGTGGAAGACC
TGTGATGACAATGATGAGTTCTCTTGGAGGTCATCAACATTTACAGAAGCAGCAGCCGCC
GAGTTCTGTTTCTCCACAACCATCACCAAGCACGCAACACCGGCACGTGCCTGTCCCAGC
AGCACAGCATTCTCGGTCATCTTCGCTTCATGTTTATCCTGCTGGTTCTACGCAATTCTT
GTTGCCTGGGCCTACATCAATCAAAACTGAACCGACTGCAGGAAGCTTCATAAAGGAAGA
GACAAAATCGCCAATGCATGCTGTTGCTCCGCACTATTCGAATCAACTCATTCGGTCACA
ACCGTACACTGGTATGCAGCAACAAAATCAAGGACCTGTCACGAAAAATGAGCCGACAGA
AACCTCGAACATGCCGTCAAAGGATTCGTTGCTTCAAGCTATGGAGAAAGTGGACAAAGA
AATACAAAAGGTAACCAATGAGATGAAATCGCTAGAGCGGAAACAACAGCAACTTGAAGA
AGCTGCCAAAAAACCTGCAGTACCAGAGAAGACTGATTCTCCCAAAAAGGTTGACACCAA
ACACAAGGACCTGTGGCAACGCAAAGCAGAGGCCGCAAAAAGTCAGTTAGATGGGTTGGG
ACCACGTTATGACATGCCGTTATATAATCAACCAAGCGACACCAAAGTGTATCATGAAAA
TTTGAAAAAAAATGAAGAAATGAGACCAAAATTGTTGGCTTATTTTCAACACCGTCGTCA
ATTGTCCAACATCAGAGAACGATATCTTTGCGCACGATANGATCTATTGATGGGTGAATG
GCAGAAGAAAACAGAGCGGATTGAAAATAACATAAAAAGAAAAGGAAAAGAGACAAAAGT
CCGTGAGTTTTTTGAAAAACAATTTCCTGAAATTCGCAAACAACGCGAACAACAAGAGAG
ATTCTCTCGTTCTGGTACAAGAGGTGACACTTGCCGAAGTGATGCTGATTTTAATGAGAT
CGTCGATGGATTGTCAGAGCAGGAACATCAAGAACAACACATGAGGCAATTGGCCGTCGT
ACCACCGATGCTGCTTGACAGAGATGAGCGGAAATTGAAGTTTATCAACAATAATGGTCT
CGTCATTGAACCAATGGATGACTATAAGAAACGTCAAGAATTGGATCATTGGAATTCTCA
AGAAAAGCAAATTTTCAAAGAAAAATTTATTCAACATCCAAAAAACTTCCATGTCATCGC
GTCATGTTTGGAGAAAAAGAGTGTCAACGATTGTGTGTTGTTTTATTACCTTTCGAAAAA
AAGTGTCGGATATAAAGCACTTGTGAGGAAGATCTCCNTGAAGTCGAAAAAGGTCAAACC
AGGACGGAACCAGGCTTCTGCACTAGCCAGTTCTTCAGATGTTGCAAAAACTGGACAATC
TGCAGACAAAATTGATAGAGATTCTGATATGAAGGGAGAATCCTTAGATATGATCATGAA
AGTGGAAGAAGCGGAGAGGATTGATAAACCCCCATCTCCAAGGATGACTAGATCCAGAAA
TAAAAACCTGAACTGGAACGATGAAGACATATCGACAGNGAAGGATGGCTTCGGGAAACA
TGGCAAAGATTTTGCTGCAATATCAAGATTGTTCACCAACAAAACGGAGCAGCAGATCAA
GCAGTTTTATCAAAGTTACAAAAAGAAGTACAATCTGGATCAGCTCATCAGTGACGGGAA
GAAAAAAAAGCCTGAGGGAAGTCGAAGGACCAGAACTCAAGTGGCAACTCCATCGTCAGA
GTCTTCGACCACGCCTCCAATTGAAGAATCTGCCACAAAAGATGACAACCAACCGAAGAG
CGCTGATATTGAAAATGAAATGGCAGAGGTTTCGGAAACTCTCAANAAGAGAAAGAAAGA
ACTCGAAGAAGATCAAAAGAACAGTGATTCACAAAAGGCTGAAGCTGCCAGCATACCTGA
AGCAGAAACTGGGAAGTCATCATCAGCTACTTCACAAATACGGACCAGAAGATCGGCTGT
TAATACTGGCAATGCTGATAGCAATAAAACACAAGCTCCAAAGCGAACTACTGATGGTCC
ATCTGGTGATGAACCGGCTGAGAAAAAAGCAAAGAAAGTGAAGACAACCAAAGACACCAA
ACCTGACAAGGAGTTGCAGGAAGAGGAAGAGGAAAAATCTCTTGATGCCAAAGTAGAGGC
AGGGAAGACTGATAATAGTCCTCCATCTGAGGCAGATCATGAGGATGCAAGGGTAAAAGC
AGCTGAAGTGAGGACTGAACCGAAAGTGATGGCTACCATAACTGCAGAACAAACAGAACC
AATTGTCACAAAATTGGAAGTGAAGCCATCCGCACCGTCAGTAAAAACAACAGCGCCACC
TGTGGTTGAACAAAAGCAACCGAATCCACCAGAAATCACCACTGCTGTCGCTCCTTCACC
TGGAATAATGATAGAATCAAATGATAAAGCAGACACTAAGCCTCCAACAAAGTCTGTCAT
AAAGACACATAAAGATGGTGATGGAGACAGCTCGGCCACTTGCAGTGCTGATGAGGAACC
CAATCTCCAAGACGTGACTGCCAAACGACATGTTGATTCTCCGTATGCATTTGAAGAAGA
ATCCTCTGCCTCGATCAAATTGGAGACGTCTCGTACAGCAATGCCACCCGCCCCAGTGGT
TGCAAACATAATAAAGCAACCGGCTCCGGTCACAACTTCTGCTGAAGGAAATCGCCCTGC
TTCAACCCATGCTCCTGGACAAGTAGTGAATTTGAAGCAAGATGCAAAACGTCCGCAATC
TCTTCCGCCACCTCCNAGTGTTGTACCAATTGCAACATTGACCTTCAATCCTAGGATGAA
GGCGACTCACAAATCAGATCTCATCACAGACAGGATCCCTGATGCAGCAGAATTCAGACA
CATGCTACAAAACCCACCACGAAGCGTTCCTGCACCACGCCAGGAAAAACCTGCGAGTAG
TGAGCCGTGTCGAATTGATTTGACTGGATCATCTTCAGAAGAAAATGCACCTTCGAAGAA
AGGTATTGACAAAACGAAACGACCTCAGTTGATGCAGAAGCCAGCTCATTATCATCCTGT
ACCAATGCAAGCGGAATCACTTCGTAAAGACTTCATTCCAACCAAAACAAGTCCATCAAA
AGCATTGCCAGACATGCCTGAGATGCAATATAGGAAATACACTGCTGCTGATTTGGATGC
GATGAAAGAAAGAGCGGCAGTGATCCCCGTTTCGTCACTTCGGGTGCCAATGACAAGCTC
TATGACAAAAGAGCCTGCGAAAGTTGAGCATCCCATAAAGAGAGAAATCATTCATCCCCG
TACAGAACATCTGCAATACCAAAAGCCGTACCACCCTCTGCAACAGCCTATGTTGATGCA
AACCCATCCAACAACCACTATCGGCCGCTCCGTCTTAACCACGAGCTCAATCCCTACCAA
ATTTGTGTCAGGAGCCATTTCTTCAGGCCCTCTCCACGGCGGTCCCATCCAATCATTGTT
ATACGATCCTCATCGTCCTGAAGTTTCCGCGTTGGTACAAAATATTCATCAAATGCGTGA
TCCAAACCCGTACAGTCGTCATCCTGCCATTGAGACAACCCCTGTGTCTAGGACATCCAT
TGTGAAGATGGCATCTGGTCATATTCCAGTTGACGCAGAGAGACCAGTTATTATTCCCGA
TGACAGCCGTAAACCCAAGGTCGTTCAGGGATCAATCATGACCGGTCAACCGGTGCAGCG
ACCTCACGAAGAGAGAACAGAACGCATGGAAACTATGCTCGGAAAACGAGTTATCGTCAA
ACCACCACCGCGTGCGTCTCCAATTCCAGAACATTCCAGAATGCATGAAGCACACATGCA
TGGGTTACGTTACCCACAACCTGATGTACATCAAAAACGAATGGGGTCAATATTGGAAGG
CACCCCAGTTGTACAAAGAAAACCCAGTGATGATTCAAACCCAAGTCTCTCCCCGACGGC
CAACCCGGCGATGTTGATGCGACGAAGCCCGACAGTCCTTCAGTCTGCGCAAAAGCAAGT
GGAGAGAAGAGGTCCCAATGAACCTGACAGGGCAATCGATCCACATCGAGGGTATTCGTA
TATTAATCCAGAAGCCATGAAAAAAGAAGTTGTCGACCATTATCAAAGCGCTCGTCAGGC
ACTAGACAAAGGACGTGAGGCATCTAGTCAATCTGCGAGTATGCGTCGTACTCCTACTGG
ACACGTTCCTCAACCTGCACCTGTGAAAAAGGAAATTCAAAGTCCACAAACTCCAGAAGA
GATGATGCGAAGACCACATATTGCTCCTTCTCCTTATGAAATGTACCAGATTCCAGGATT
GCCGGGAGCACCTCCAGATTTAGCAAGACTTGGAGTTCAACGAATACCTTTAACGTCTCC
CGGTGTCAGTCCCGATCTCCTAGAAGTCATCAGGCAATACGGTCGAGCTGGCGGTGTAGG
CGGACCGCCATTGTATCCCTTGTTTTTGCCTGGGTTACCTTACCCTGGTCTTTACCCACA
TTTGGGTCCAATGCCACACCCTGGAGCATCCGGTAACCCACAGAACGACAACACGCGTGA
CGTGACATCAAAAATGCTGAATCAGGATTTTAAAACTGCACAATTGATGATGAGCAAAGC
GCCAGCAACTTTACCAGGAGCTCCGCAATTGACTCCAGCGGCCGCAGCAGCTGTGTTGTC
TGCTTCTGCGTTAGGCGTGCCTCCAATTGTTGTTACTACTCCTGGACCATTCCATCATCT
AGCGGCTGCTTACCCGCAAGGAGCTCTCACTGGGGACCGAATCAACTTTATTCCAGCTAA
TCCTGCAATGGCACGAAGCCCGTTTTCTCCGCAGTTTCCTCCATCTGGCCGTAGTTCTGC
AGAAAGCAATCGATCTCCATCACACAGACCCTCGAATCCAGCGAGCCCAGACCTGACACG
GCATCGCCACAGCTCGGGAGATATGCCTCGAGAATTCGCCAATCATCCTGCCGTCAAAGG
ACGCAATTCGCCTGGCAGTCCCTACTCACACCGAACATCTAGATCACCGCAACGTTACCA
AACCAACACTCCACAATCACAACTAAGTCCCACTCATTTACAAAGCAAACCCTACCCGCA
TTATCCTCACCCGAGTGCTTCTCCATCCCGACAACCTTCCAAATCACCTCATGTGATTCC
TGGCATGCCAACTCATGCATACATTGACCCTAACCATCCAGTGCACATGCATGAGTCCCA
TCCGTCATTAAGAGGGAAATTAGCTCGGAATGATTCTCTTGATAACAATAGCATACCAAA
ACTGGATAGACCTCGCCCAGAGTCTGCAGGGCCTTATGTAAGATCCCTACCACAGAGTCC
TATTGAAAATCCAGAGCCAAATCCAAAATACTCCCATTCGCGGCAGTCATCTGATAGTCT
TAGATACAGGACAGAACCGAAGCGTGATCAGTCTCACCCGCCGCATCTTTTATCACATGA
GCAGAAATCACACATGAGGGATGAGAGAACGTTCCCTCCAAGTCACCAAGAACGAGTGAG
CCAGCGTGAGAGCCCTCGTCCCAAACATCATCCAAGTGATGGAAGAAGTGATGCAAGATT
AGCGCAACAACAACCAACCATCCTATCAAACCCAGCTTTCCACGCTGCGTACGTCCATCA
AGCAATGAAGCGCGACTCCCAATCTCCATCACGTTCCAAAGAACGAAGGGCAGATTCTCC
AAAGGATCATCGACGGGCTGACCCTGGGAATGGCAGAGAAAATGAAACATCTTCAAACCC
GGGAGAAGACCTGAGAACTTGTGGCAAAACGAAAATGAAGGCTGGGGCGTTAATCAACCA
CATCATTAACATGAACTTCCCATCTCAGCCTGAGCCTCCGCCCAAGCCAACTACTCCAGT
CCATGACCAGGCTCGTTCGAAGACTGGTGAAGTAGTTCGCGCATCAGATATGCCGAATCA
GAGGACGACTTCNTCCCGGTCTCCAATGCCGTTCATTCCAACGCAACCCGCACCGCCTGC
ACGCCATGTGATAGATAGCGATAGGGCTGCTCTCTTGTACCCGTTAGCTGGACCTCAAAG
CTTAACTCTGGCTCGTCACTCACATGACGTTATCGATCATTATTACAGGCAAAACATGGA
GTCACCTAGCCGTACAGCGAGTCCTGCATCAAAGCCTACAATTATACCAACAGAACCAAT
ATCTCCAGACACGCATGTTTCCAGTAAGCAGGAGCAGAAGACTGTTGCCCCACAGTTTCA
ACCACAACCACAAAGATTTGTGACCCCTGCAGAAGCAAGACCGCGAATGGATGTACCTGC
AGATGCCATTCGACCAGCGATTACTCGTCCGCAAGTTCCGCACCATGCAGTTCTGCCATT
GTCAGCGATGCCAGGGCCGGCNGCAAGTGCTTCGTTGGAGGATATCATAAGAGAGGCTCT
AATGACAAATGATGGCTCACCTGCATCATCCGACTCTCACCACTTGTCGAAAGCACAAGA
TTTCAGATACCCCGTCAATGATCTGTTTCTGTCACATGCTGCCTTGGCATCGCTTCCACC
TTCTCTTGTTTCACAATACGCCTCTGTAGCGTCTGCTCGGAACCTAATGCCAAAGCAAAT
GCATACTGAAGAACGCAAAGGCCAAGCCGGTACCGCTCCACCTCCACAAGCACAAAGTGG
TTCAGAAAAATACATGAGTGCATTGATGTTCCGACCATCACCGGCGGCACCTCCAGCAGC
GCCACTTCGACCAGAACAACAGCAATATTATCAACCACCGACAAGACATGCCATGCCTGC
TGCTTCTCAATCGCCGGTACCACAAGATGCAAACCAATCTTCTCAAAGCAGGCAGATCCA
TCGACCACAATACGAGGCTCTTAGCGATAGTGATTGAATGCCAACGATTTCAAAAGGGGT
TTTGTAGGGTGTATTTTCAACAAAAATCATCCCACTATTGCAAGGGGCTCTTAGGTATCC
AATGTATCCTTTTTGAAATAGTTGGCCTGTTTTTATCAAACAAATCTGAGCTGGTGGTGA
ACGGTGCATAGTACACTGTACTTGCAGAGTTNGGAAGATTTAATGCCAAGCCTTGGCTCA
AGGCGAGGCATCAAGTTCATGGCGAAAATGCTCATGTAAGACCTTCATGTGATACACCAG
TCGGTTGACTTGAACAGGGCTCTCGTCAGTCTAAGAGAATGTAGGCATCCGTACAAATGG
TTGCTTCACTTTTCATTATGAAAGTCCCTGTCATGCTGTTCTTTCTTCTTTACCTAATTA
AATATTGGAGCTTCGAATGCTCGTTACTTTTGTTAAAGTATACCCGACAGGACATCAAAT
CCGTCAGCTTGATTGAAAGCTACGATTTTTATACAGTTTGATTAATGAATGCTGCTTTCG
GTGATGAATAAAACTATAGCATCATGTAGAAACTGCC
| Pfam |
N-CoR_GPS2_interact (IPR031557) - T[247-319] 2.3E-14 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[497-557] 3.34E-12 - T[633-685] 3.93E-8 |
| ProSiteProfiles |
SANT_dom (IPR017884) - T[505-556] 15.584 - T[633-684] 12.301 |
| SMART |
SANT/Myb (IPR001005) - T[506-554] 6.5E-7 - T[634-682] 2.3E-6 |
| CDD |
SANT/Myb (IPR001005) - T[510-549] 1.71826E-5 - T[637-680] 1.09148E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NCOR1_HUMAN | 55.09 % | 360 | 5.25E-100 |
| NCOR2_HUMAN | 55.031 % | 365 | 1.84E-101 |