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  1. Transcript 'KH2012:KH.C5.23.v5.A...'
  2. Transcript 'KH2012:KH.C1.693.v1....'
  3. Transcript 'KH2012:KH.C5.392.v2....'
  4. Transcript 'Boleac.CG.SB_v3.S89....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S89.g15012.01.t

Possible name(s)

DHH; IHH; SHH

Location

S89 [45,189 / 56,828]

Sequences

Amino acid sequence

Length: 421

>Boleac.CG.SB_v3.S89.g15012.01.p
MYLTEDMDYQESVIFIAVLLIFTNHRMTDACRGYGKRPPATGRHSQKSDVPLRLGQRIPN
ISEKTVGASGPAEGKITRGDKRFRDLITNINPSIVFRTGANKQMSKRCEDRLNLLALKVQ
QNWPGVRLRVLQAWDGDDQHGDNSLHYEGRAVTLTTSDRDRTKYGMLARYAVDAGFDWVY
YKSTHYIYASVIADDVQSRFEGGCFPKDSDVTMGDGTVRKIADLKVGDKVVTLDRVTGER
KVTDVILMMHKNIDAVYNFLRITAETNIAKSSQRQITLTANHLVYKHDSNSSVRWQPRAV
FAEDVNLGDYIYFDSLEITNGRXFALAKVTAVDVVKRHGVFAPLTAEGSITVDGVAASSY
AVYNNEEISHALFYPLRLLWRWGLRWGDSLSIIKHTGGVHWYPRSIFHVANAILPKGVLN
P

Nucleotide sequence

Length: 1,266

>Boleac.CG.SB_v3.S89.g15012.01.t
ATGTACCTCACTGAAGACATGGATTATCAAGAAAGTGTTATATTCATAGCTGTGCTGTTG
ATTTTTACCAATCATAGAATGACCGATGCGTGCCGCGGCTATGGTAAAAGGCCGCCTGCA
ACCGGTAGACATTCGCAAAAGTCAGATGTTCCACTCAGGCTTGGTCAACGTATTCCCAAT
ATATCCGAAAAGACTGTCGGTGCAAGCGGGCCAGCTGAAGGCAAAATTACGAGAGGAGAC
AAACGTTTCAGGGACTTGATTACGAATATCAACCCATCTATCGTATTCAGGACTGGTGCC
AACAAACAAATGTCCAAGAGATGTGAAGACAGGCTAAATTTATTAGCGTTGAAAGTGCAA
CAAAACTGGCCTGGGGTGCGGCTGCGTGTGTTACAAGCATGGGACGGTGACGATCAACAC
GGAGACAACTCACTTCATTATGAAGGCAGAGCAGTTACATTGACTACGAGTGACAGAGAC
CGTACCAAGTATGGAATGCTCGCACGTTATGCGGTTGATGCTGGGTTTGACTGGGTGTAT
TACAAGTCGACACATTACATATACGCAAGTGTCATTGCCGATGACGTGCAATCTCGTTTC
GAAGGAGGATGCTTTCCTAAAGACAGTGACGTCACAATGGGTGATGGTACCGTGCGAAAG
ATAGCGGATTTGAAAGTTGGAGACAAGGTAGTCACATTAGATCGCGTCACTGGCGAGAGA
AAAGTGACGGATGTAATCTTGATGATGCACAAGAACATCGACGCTGTCTACAATTTTTTG
AGAATAACAGCCGAAACAAATATTGCCAAAAGTTCGCAACGACAAATTACCCTAACCGCT
AACCACCTCGTTTATAAACACGATTCGAATTCTTCCGTGCGGTGGCAGCCGAGAGCTGTT
TTTGCAGAAGATGTTAACCTCGGTGACTACATATATTTTGACTCTCTTGAAATTACTAAC
GGCAGANATTTCGCTTTAGCGAAAGTAACTGCCGTGGACGTTGTAAAAAGACACGGCGTT
TTCGCCCCACTCACTGCTGAAGGTAGCATAACTGTTGACGGTGTCGCGGCATCGTCATAT
GCTGTCTATAATAACGAAGAGATATCCCACGCCTTATTTTATCCGCTACGTTTGCTGTGG
CGTTGGGGTTTAAGATGGGGCGATTCATTAAGTATTATTAAACACACAGGTGGTGTACAT
TGGTATCCTAGGTCGATATTTCATGTCGCCAATGCAATTCTTCCCAAGGGTGTCCTGAAC
CCTTGA

InterProScan

Pfam
Hedgehog_signalling_dom (IPR000320) - T[41-190] 6.6E-65
Gene3D
Hedgehog_sig/DD-Pept_Zn-bd_sf (IPR009045) - T[49-203] 3.6E-61
SUPERFAMILY
Hedgehog_sig/DD-Pept_Zn-bd_sf (IPR009045) - T[50-196] 1.83E-58
PRINTS
Hedgehog (IPR001657) - T[103-121] 9.2E-58 - T[123-140] 9.2E-58 - T[143-165] 9.2E-58 - T[167-188] 9.2E-58 - T[189-207] 9.2E-58 - T[278-288] 9.2E-58 - T[339-353] 9.2E-58 - T[355-378] 9.2E-58 - T[398-414] 9.2E-58
Pfam
Hint_dom (IPR001767) - T[199-414] 2.0E-48
SMART
Hint_dom_N (IPR003587) - T[202-315] 2.4E-19
ProSiteProfiles
Intein_N (IPR006141) - T[204-286] 10.695
SUPERFAMILY
Hint_dom_sf (IPR036844) - T[204-361] 5.1E-30
SMART
Hint_dom_C (IPR003586) - T[321-365] 0.0058

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHH_HUMAN 40.568 % 281 2.82E-91
IHH_HUMAN 37.913 % 266 2.3E-85
SHH_HUMAN 41.667 % 262 3.09E-83





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