- Molecular Tool 'ciad08d17-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.L170.69.v2...' >
- Region 'REG00000192' >
- Transcript 'Boleac.CG.SB_v3.S89....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S89.g15018.01.t
Possible name(s)
BMP7; LEFTY1; LEFTY2
Gene model
Location
S89 [102,985 / 106,531]
Amino acid sequence
Length: 425
>Boleac.CG.SB_v3.S89.g15018.01.p
MSSKNSPALTIFHIVSGTGCSTLLLVAWMVQASVFIIPEALAGMSEPSFVEKFSKYAYEE
ENIHFLKKSLLDHVGLDSFPVFSREDVANVEVPYHLKKRYEDLKSKHEERHRVRRSSLAA
LFSKVHNNPAIPGNIMYSDPYREKLEFEMDGRIPKGTVVTMAELRLYKMLPDFEKLRKIG
VNVRRRYRNMHPSLFLRNHPGRFMKPVRHARVSIYHHLVNPDGLITSTLIDSRKIHVNGS
GWQAFDVTDAVHQWQLHPTRVMTMTLEMWIEGTRPTRHAASIAKLVRFTGQKEQSQGQGY
RPELVIFTEEERNTGTRECRKNSKPKRRKCCRDNYYVSFREMEWTKYWILEPAGYEAYQC
DGKCAASRRRGREGLSRTCSVAESAPLPIMYLTKRGDVTAVEVTEFPNMIVTRCGCSLDN
VFLSV
Nucleotide sequence
Length: 1,278
>Boleac.CG.SB_v3.S89.g15018.01.t
ATGTCTAGCAAAAATAGTCCCGCCCTGACAATTTTTCATATTGTGTCAGGAACTGGTTGT
TCCACATTGCTATTGGTTGCGTGGATGGTACAGGCGTCAGTATTTATCATCCCAGAAGCT
CTCGCAGGGATGAGTGAGCCATCATTCGTTGAGAAGTTTAGTAAATATGCCTACGAAGAG
GAGAATATTCATTTTCTCAAGAAGTCATTGCTGGATCATGTTGGACTCGATTCGTTTCCT
GTTTTCTCCCGTGAGGATGTTGCGAATGTTGAAGTTCCTTATCATTTGAAAAAGCGATAT
GAAGATTTGAAGTCTAAGCATGAAGAGAGGCATAGAGTCAGAAGATCATCCTTAGCGGCT
CTGTTCAGTAAAGTCCATAATAATCCTGCGATACCAGGCAATATCATGTATTCGGATCCT
TATCGAGAGAAGCTAGAGTTTGAAATGGATGGACGGATACCGAAAGGGACCGTGGTTACC
ATGGCTGAGCTGAGACTGTACAAGATGCTTCCAGATTTTGAAAAGTTGCGCAAAATCGGA
GTGAACGTTCGAAGACGGTACAGAAACATGCACCCGTCTTTGTTTCTTCGTAACCATCCA
GGAAGATTCATGAAACCTGTCCGACACGCGCGAGTGTCGATCTATCATCATCTTGTCAAT
CCGGATGGGTTAATTACGTCAACTCTGATTGATTCCAGAAAAATCCACGTGAATGGATCA
GGATGGCAAGCATTTGATGTTACCGATGCAGTTCATCAATGGCAGTTGCATCCGACCAGA
GTCATGACGATGACATTAGAGATGTGGATCGAAGGTACAAGACCTACTCGACACGCTGCC
AGCATCGCGAAGCTTGTTAGATTTACTGGACAGAAGGAACAGTCGCAAGGTCAAGGATAT
AGGCCGGAGTTGGTTATCTTCACAGAGGAGGAACGAAATACAGGAACTAGGGAATGTCGC
AAAAATTCAAAACCTAAAAGACGAAAATGCTGTCGAGACAATTATTACGTCAGTTTCCGC
GAAATGGAATGGACCAAATATTGGATTCTTGAACCAGCCGGATATGAGGCGTACCAATGC
GACGGGAAATGCGCAGCAAGTCGTCGAAGAGGTCGGGAAGGACTTTCAAGAACTTGCTCA
GTGGCTGAGAGCGCGCCACTCCCTATAATGTATTTAACGAAACGCGGAGACGTTACAGCG
GTTGAAGTGACTGAATTTCCTAATATGATTGTCACGAGGTGCGGTTGTTCATTAGATAAC
GTGTTTTTATCAGTTTGA
| Pfam |
TGF-b_propeptide (IPR001111) - T[63-288] 4.9E-16 |
| PANTHER |
TGF-beta-rel (IPR015615) - T[65-419] 1.0E-110 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[309-417] 22.689 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[318-417] 8.8E-23 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[323-416] 2.02E-18 |
| Pfam |
TGF-b_C (IPR001839) - T[329-416] 7.5E-13 |
| SMART |
TGF-b_C (IPR001839) - T[330-417] 8.9E-8 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[349-364] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LFTY2_HUMAN | 30.081 % | 151 | 7.75E-42 |
| LFTY1_HUMAN | 28.997 % | 141 | 3.25E-38 |
| BMP7_HUMAN | 23.81 % | 84 | 1.47E-17 |