- Transcript 'Cisavi.CG.ENS81.R234...' >
- Transcript 'KH2012:KH.C7.730.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C5.140.v4....' >
- Transcript 'Boleac.CG.SB_v3.S8.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S8.g14322.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
S8 [665,991 / 672,567]
Amino acid sequence
Length: 485
>Boleac.CG.SB_v3.S8.g14322.01.p
MMSLSPISIYNAGADEEKAETARLSSFVGAIAIGDLVKSTLGPKGMDKILMSVGSSGMEP
SITVTNDGATILKAVGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEKLIAQ
KIHPQTIIAGWRLATETARKALLNSARDHGNDPEKFREDLMNIARTTLSSKLLTQHKDFF
AKMAVDAVLRLKGSGNLEAIQIFGSRVRVDGTAKVAEIELAEKQKMKEKVDKILSHNITC
FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLALVLGGEICSTFDRPDLVKIGTCKLI
EEVIIGEDKMIKFSGVEKAEACTIILRGATQQILDESERSMHDALCVLSQTVKETKTVFG
GGCSESVMAQAVDELAAKTPGKESMAVESFARALRQIPTIIADNGGYDSAELVSQLRAAH
TEGKKTAGLDMNQGCVGDVAELGITESFQVKRQVLMSASEAAEMILRVDDIIKAAPRQRR
PDHPH
Nucleotide sequence
Length: 1,655
>Boleac.CG.SB_v3.S8.g14322.01.t
TTTTTTACAGATTCGTCGACAATTTGCGCTGAACCACACAAAATATTGTCAAAATGATGT
CTCTTAGCCCCATTTCGATTTACAATGCCGGAGCAGATGAAGAAAAGGCGGAGACTGCAA
GATTGTCTTCCTTCGTTGGAGCAATTGCGATCGGAGACCTTGTCAAATCAACTCTTGGTC
CAAAAGGCATGGATAAAATTCTGATGAGTGTTGGAAGCAGCGGAATGGAACCAAGTATCA
CAGTCACCAACGATGGAGCCACAATTTTGAAAGCAGTNGGAGTTGATAACCCCGCGGCAA
AAGTTCTCGTTGATATGTCAAAAGTTCAAGATGACGAGGTCGGTGACGGAACAACATCTG
TAACAGTGTTAGCTGCGGAACTTCTACGGGAAGCAGAAAAACTGATCGCCCAGAAAATTC
ACCCTCAGACAATCATCGCAGGATGGAGATTAGCAACAGAAACCGCTCGTAAAGCTTTGT
TGAACTCGGCTCGAGATCATGGGAATGACCCAGAGAAATTCCGTGAAGATTTAATGAATA
TTGCAAGGACAACGTTAAGTTCCAAACTTCTCACCCAGCATAAAGACTTTTTTGCGAAAA
TGGCCGTCGATGCCGTCCTGAGATTGAAAGGAAGTGGAAATTTGGAAGCTATCCAGATTT
TTGGATCTCGTGTTCGTGTTGATGGAACAGCGAAAGTTGCCGAAATTGAACTTGCGGAAA
AGCAGAAAATGAAAGAAAAGGTTGATAAAATACTGTCACACAATATCACTTGCTTCATCA
ACAGGCAATTAATTTACAACTACCCTGAGCAACTGTTTGCTGATGCCGGCGTAATGGCCA
TCGAGCACGCTGACTTTGAAGGCATTGAACGCCTCGCTCTAGTCCTCGGAGGAGAGATTT
GTTCGACTTTTGACCGACCTGATCTTGTCAAGATAGGAACTTGTAAACTGATCGAAGAAG
TCATCATCGGAGAGGATAAGATGATCAAATTCTCAGGTGTGGAAAAGGCTGAAGCTTGCA
CGATCATCCTCCGTGGAGCGACTCAGCAGATTTTGGATGAATCTGAACGATCCATGCATG
ACGCTCTTTGTGTTTTGTCACAAACAGTAAAAGAAACAAAGACTGTTTTCGGAGGTGGAT
GCTCGGAGTCGGTCATGGCCCAAGCGGTCGACGAACTCGCAGCCAAAACTCCCGGTAAAG
AATCCATGGCCGTAGAATCATTCGCAAGAGCTCTGAGACAGATTCCAACGATCATTGCTG
ATAACGGCGGTTACGACAGCGCTGAGCTTGTGTCGCAGCTACGAGCCGCTCACACTGAAG
GGAAAAAGACCGCTGGACTCGATATGAACCAGGGATGTGTTGGAGACGTTGCTGAGCTCG
GAATCACCGAATCTTTCCAAGTCAAGAGACAAGTGTTGATGAGCGCTTCTGAAGCTGCAG
AAATGATTTTACGAGTTGATGATATCATAAAAGCTGCACCTAGGCAACGTCGACCCGACC
ATCCTCATTGATGAAGAGTTGTATTGAGCTATTTATGCTGAATGTGGTCTATCGTGACAT
CACAAAACGTTGATCGTTGCCAGTGTTGTAGTGGCGTTATGCATGCAGATTTTCACCGAT
TGAATAAACTTTTGTAGACTGTGGACAACTTCATA
| PANTHER |
Chap_CCT_beta (IPR012716) - T[5-202] 1.5E-250 - T[200-479] 1.5E-250 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[5-202] 1.5E-250 - T[200-479] 1.5E-250 |
| CDD |
Chap_CCT_beta (IPR012716) - T[9-478] 0.0 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[16-149] 7.2E-76 - T[355-475] 7.2E-76 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[32-147] 9.8E-66 - T[356-473] 3.0E-93 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[34-192] 5.3E-50 - T[205-475] 8.5E-77 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[35-51] 1.3E-13 - T[92-111] 1.3E-13 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[38-50] . - T[64-80] . - T[92-100] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[148-201] 9.8E-66 - T[320-355] 3.0E-93 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[156-208] 4.27E-21 - T[318-353] 4.27E-21 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[202-319] 3.0E-93 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[204-328] 4.71E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 33.273 % | 265 | 1.1E-82 |
| TCPH_HUMAN | 33.208 % | 261 | 3.96E-81 |
| TCPB_HUMAN | 71.053 % | 739 | 0 |