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  1. Transcript 'KH2012:KH.C5.380.v1....'
  2. Transcript 'Boleac.CG.SB_v3.S917...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S917.g15305.01.t

Possible name(s)

CDC6; ORC1; ORC4

Location

S917 [35,492 / 39,702]

Sequences

Amino acid sequence

Length: 710

>Boleac.CG.SB_v3.S917.g15305.01.p
MATQSVLPFPCRKPRVLSSKIVNLENSPTKSNYSIPNGKSGSKLSRSVMMLPKSPRKLLG
ERTNLSEKWTQEDLLNEILRLSPQSPVKPKKDCPAFKTPVSTKSPQKHITDRNSMMSPTR
TILSPIRSLSLQSPEKTSHIADLKRSKILQLKLQKIIVSDPKSPVKLPLESKPTPCNEEE
AVEKDIKDRQMFQMVQKATPKKILPISEKRITRSARKLRCQQNVLDVVQDDFKENVPPDS
CPTPSKKKKPSPEPKKVQATPKSQRTKKRVARMLDVNATAKLVSPKKLEFHTVDSTPTSS
PQKETNCEKPVLALHKPYSLPYQITKHALHSSLPDELVGREEELKXISEFVXSRIDCKKS
GSLYISGAPGTGKSACAAKVLSSNEIALHAHVITINCMSTKNATAIYSKIASELGAKPTT
CKMVKXSVNYLETALTSNACPVVLLLDEMDQLSSKNXEVLYTMFEWPALPKSRLILIGIA
NALDLTDRILPRLQTRKNCQPDLLNFRPYSKDQLISILEDRVKKFCARXVSAVAGDARKA
LDICRRAVEVVETSVKSQQILSSPVKTNGLAGKVGLKEISRVLSEVYESSLSHKKSCGDS
TEEESFPLQQKLAICTLILLSRHIKCKEVTAGKLHEAYSKICKKRKVTAVGQSEFLSMLQ
LIETRGIVSMKAAKQTRMTKITLALQEKDVEHALSDKTLLSAILQEGLPK

Nucleotide sequence

Length: 2,277

>Boleac.CG.SB_v3.S917.g15305.01.t
TTCAGTTATATTTTATCTACTTCGAAGTTTTGCTGCGTTAGTGCATCGGTTGAGATGGCG
ACTCAGAGTGTTTTACCCTTCCCTTGTCGGAAGCCAAGAGTTTTATCTTCTAAAATCGTG
AATTTGGAAAATTCACCCACGAAATCTAATTACTCAATACCAAACGGGAAAAGTGGATCT
AAGCTTTCAAGATCTGTCATGATGCTGCCCAAGTCGCCACGAAAATTGCTCGGTGAGAGG
ACAAACCTTTCTGAAAAATGGACGCAAGAAGACTTGTTGAATGAAATACTCAGATTATCA
CCACAATCTCCAGTAAAACCAAAAAAAGACTGCCCAGCTTTCAAAACACCAGTTTCTACA
AAGTCACCACAGAAACATATCACAGATAGGAATAGCATGATGTCTCCAACAAGGACAATT
TTGTCACCAATCCGATCGTTATCATTACAATCCCCAGAGAAAACTAGCCACATAGCAGAT
TTAAAACGATCAAAAATCTTGCAGTTGAAATTGCAAAAAATCATTGTTTCTGACCCAAAA
TCTCCAGTAAAATTACCTCTTGAGAGTAAACCCACACCTTGCAATGAAGAAGAAGCTGTT
GAAAAAGATATTAAAGACAGGCAAATGTTCCAGATGGTACAAAAAGCTACGCCGAAAAAG
ATATTACCAATTTCCGAAAAAAGGATCACGCGGTCAGCACGGAAGCTGCGGTGCCAACAG
AATGTATTGGATGTTGTTCAAGACGATTTCAAAGAAAATGTGCCGCCTGATTCTTGTCCG
ACACCGTCAAAAAAGAAAAAACCCAGTCCAGAACCGAAAAAAGTTCAGGCNACACCAAAA
TCTCAAAGAACTAAAAAACGGGTCGCTAGAATGTTGGATGTGAATGCCACTGCAAAATTG
GTCTCACCAAAGAAATTGGAATTTCATACTGTTGATTCAACTCCAACGTCTTCACCACAG
AAGGAAACAAACTGTGAAAAACCTGTTCTTGCTCTTCATAAGCCCTATTCTCTTCCATAC
CAAATCACAAAGCATGCCCTGCATTCATCGCTTCCTGACGAACTNGTCGGTCGTGAGGAA
GAATTGAAANCTATTTCTGAATTTGTCNCTTCCCGAATCGATTGCAAGAAATCAGGCAGC
TTGTACATATCTGGTGCACCAGGAACTGGCAAAAGTGCATGTGCTGCGAAAGTACTATCA
AGCAATGAAATTGCACTACACGCACATGTCATAACAATAAATTGTATGTCCACAAAGAAT
GCAACTGCAATATATTCAAAAATCGCTTCTGAATTGGGCGCCAAGCCTACAACTTGTAAA
ATGGTCAAATNGTCAGTAAATTATTTGGAGACTGCTTTGACGTCAAACGCTTGTCCTGTG
GTTCTACTGCTTGATGAGATGGATCAGCTTAGCAGCAAAAATCANGAAGTTCTTTACACC
ATGTTTGAATGGCCAGCACTTCCAAAATCTAGGCTGATACTCATAGGGATCGCAAATGCA
CTTGACTTGACTGATAGAATTCTACCAAGATTACAAACCAGAAAGAATTGTCAGCCAGAC
TTGTTGAATTTTCGCCCCTACTCGAAAGATCAACTCATCTCTATTCTTGAAGACAGAGTA
AAAAAGTTCTGTGCAAGAAANGTTTCNGCTGTCGCAGGCGACGCAAGGAAAGCACTAGAT
ATATGTCGGCGTGCTGTTGAAGTGGTGGAAACAAGTGTTAAATCACAACAAATTTTATCC
AGTCCAGTTAAAACCAATGGTCTCGCCGGCAAAGTTGGACTGAAAGAGATATCCAGAGTT
CTTTCAGAAGTTTACGAGTCTTCTCTAAGCCATAAAAAGTCATGTGGAGATTCGACAGAA
GAAGAATCCTTCCCATTACAACAGAAACTTGCCATCTGCACTCTCATATTGCTCTCAAGG
CATATCAAATGCAAGGAAGTAACAGCCGGCAAGCTGCATGAAGCTTATTCTAAAATATGC
AAGAAAAGAAAAGTAACTGCAGTTGGTCAGTCCGAGTTCTTGTCAATGCTGCAACTTATT
GAAACTCGAGGAATTGTTTCAATGAAAGCTGCCAAACAAACAAGAATGACAAAGATCACT
CTGGCTCTTCAAGAAAAAGATGTTGAACATGCTTTATCCGACAAGACGTTGTTGAGTGCT
ATTTTGCAAGAAGGTCTTCCGAAATAGTGTCTTCTTTTATCCCGACTGCCAAGAAATACT
TTTATTATGATGCGTTTGATAATTCGTTTTAATTGTTTGTTTGAATTGATAGACACC

InterProScan

PIRSF
Cdc6/18 (IPR016314) - T[13-193] 370.0 - T[173-708] 1.7E-127
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[332-554] 6.08E-36
Pfam
AAA+_ATPase (IPR003593) - T[359-479] 6.9E-14
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[604-703] 9.79E-20
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[606-704] 4.6E-17
CDD
Cdc6_C (IPR015163) - T[607-690] 3.35975E-14
SMART
Cdc6_C (IPR015163) - T[614-694] 2.1E-16
Pfam
Cdc6_C (IPR015163) - T[614-693] 7.8E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDC6_HUMAN 43.898 % 383 3.39E-125
ORC1_HUMAN 27.623 % 130 1.92E-31