- Transcript 'KH2012:KH.C5.380.v1....' >
- Transcript 'Boleac.CG.SB_v3.S917...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S917.g15305.01.t
Possible name(s)
CDC6; ORC1; ORC4
Gene model
Location
S917 [35,492 / 39,702]
Amino acid sequence
Length: 710
>Boleac.CG.SB_v3.S917.g15305.01.p
MATQSVLPFPCRKPRVLSSKIVNLENSPTKSNYSIPNGKSGSKLSRSVMMLPKSPRKLLG
ERTNLSEKWTQEDLLNEILRLSPQSPVKPKKDCPAFKTPVSTKSPQKHITDRNSMMSPTR
TILSPIRSLSLQSPEKTSHIADLKRSKILQLKLQKIIVSDPKSPVKLPLESKPTPCNEEE
AVEKDIKDRQMFQMVQKATPKKILPISEKRITRSARKLRCQQNVLDVVQDDFKENVPPDS
CPTPSKKKKPSPEPKKVQATPKSQRTKKRVARMLDVNATAKLVSPKKLEFHTVDSTPTSS
PQKETNCEKPVLALHKPYSLPYQITKHALHSSLPDELVGREEELKXISEFVXSRIDCKKS
GSLYISGAPGTGKSACAAKVLSSNEIALHAHVITINCMSTKNATAIYSKIASELGAKPTT
CKMVKXSVNYLETALTSNACPVVLLLDEMDQLSSKNXEVLYTMFEWPALPKSRLILIGIA
NALDLTDRILPRLQTRKNCQPDLLNFRPYSKDQLISILEDRVKKFCARXVSAVAGDARKA
LDICRRAVEVVETSVKSQQILSSPVKTNGLAGKVGLKEISRVLSEVYESSLSHKKSCGDS
TEEESFPLQQKLAICTLILLSRHIKCKEVTAGKLHEAYSKICKKRKVTAVGQSEFLSMLQ
LIETRGIVSMKAAKQTRMTKITLALQEKDVEHALSDKTLLSAILQEGLPK
Nucleotide sequence
Length: 2,277
>Boleac.CG.SB_v3.S917.g15305.01.t
TTCAGTTATATTTTATCTACTTCGAAGTTTTGCTGCGTTAGTGCATCGGTTGAGATGGCG
ACTCAGAGTGTTTTACCCTTCCCTTGTCGGAAGCCAAGAGTTTTATCTTCTAAAATCGTG
AATTTGGAAAATTCACCCACGAAATCTAATTACTCAATACCAAACGGGAAAAGTGGATCT
AAGCTTTCAAGATCTGTCATGATGCTGCCCAAGTCGCCACGAAAATTGCTCGGTGAGAGG
ACAAACCTTTCTGAAAAATGGACGCAAGAAGACTTGTTGAATGAAATACTCAGATTATCA
CCACAATCTCCAGTAAAACCAAAAAAAGACTGCCCAGCTTTCAAAACACCAGTTTCTACA
AAGTCACCACAGAAACATATCACAGATAGGAATAGCATGATGTCTCCAACAAGGACAATT
TTGTCACCAATCCGATCGTTATCATTACAATCCCCAGAGAAAACTAGCCACATAGCAGAT
TTAAAACGATCAAAAATCTTGCAGTTGAAATTGCAAAAAATCATTGTTTCTGACCCAAAA
TCTCCAGTAAAATTACCTCTTGAGAGTAAACCCACACCTTGCAATGAAGAAGAAGCTGTT
GAAAAAGATATTAAAGACAGGCAAATGTTCCAGATGGTACAAAAAGCTACGCCGAAAAAG
ATATTACCAATTTCCGAAAAAAGGATCACGCGGTCAGCACGGAAGCTGCGGTGCCAACAG
AATGTATTGGATGTTGTTCAAGACGATTTCAAAGAAAATGTGCCGCCTGATTCTTGTCCG
ACACCGTCAAAAAAGAAAAAACCCAGTCCAGAACCGAAAAAAGTTCAGGCNACACCAAAA
TCTCAAAGAACTAAAAAACGGGTCGCTAGAATGTTGGATGTGAATGCCACTGCAAAATTG
GTCTCACCAAAGAAATTGGAATTTCATACTGTTGATTCAACTCCAACGTCTTCACCACAG
AAGGAAACAAACTGTGAAAAACCTGTTCTTGCTCTTCATAAGCCCTATTCTCTTCCATAC
CAAATCACAAAGCATGCCCTGCATTCATCGCTTCCTGACGAACTNGTCGGTCGTGAGGAA
GAATTGAAANCTATTTCTGAATTTGTCNCTTCCCGAATCGATTGCAAGAAATCAGGCAGC
TTGTACATATCTGGTGCACCAGGAACTGGCAAAAGTGCATGTGCTGCGAAAGTACTATCA
AGCAATGAAATTGCACTACACGCACATGTCATAACAATAAATTGTATGTCCACAAAGAAT
GCAACTGCAATATATTCAAAAATCGCTTCTGAATTGGGCGCCAAGCCTACAACTTGTAAA
ATGGTCAAATNGTCAGTAAATTATTTGGAGACTGCTTTGACGTCAAACGCTTGTCCTGTG
GTTCTACTGCTTGATGAGATGGATCAGCTTAGCAGCAAAAATCANGAAGTTCTTTACACC
ATGTTTGAATGGCCAGCACTTCCAAAATCTAGGCTGATACTCATAGGGATCGCAAATGCA
CTTGACTTGACTGATAGAATTCTACCAAGATTACAAACCAGAAAGAATTGTCAGCCAGAC
TTGTTGAATTTTCGCCCCTACTCGAAAGATCAACTCATCTCTATTCTTGAAGACAGAGTA
AAAAAGTTCTGTGCAAGAAANGTTTCNGCTGTCGCAGGCGACGCAAGGAAAGCACTAGAT
ATATGTCGGCGTGCTGTTGAAGTGGTGGAAACAAGTGTTAAATCACAACAAATTTTATCC
AGTCCAGTTAAAACCAATGGTCTCGCCGGCAAAGTTGGACTGAAAGAGATATCCAGAGTT
CTTTCAGAAGTTTACGAGTCTTCTCTAAGCCATAAAAAGTCATGTGGAGATTCGACAGAA
GAAGAATCCTTCCCATTACAACAGAAACTTGCCATCTGCACTCTCATATTGCTCTCAAGG
CATATCAAATGCAAGGAAGTAACAGCCGGCAAGCTGCATGAAGCTTATTCTAAAATATGC
AAGAAAAGAAAAGTAACTGCAGTTGGTCAGTCCGAGTTCTTGTCAATGCTGCAACTTATT
GAAACTCGAGGAATTGTTTCAATGAAAGCTGCCAAACAAACAAGAATGACAAAGATCACT
CTGGCTCTTCAAGAAAAAGATGTTGAACATGCTTTATCCGACAAGACGTTGTTGAGTGCT
ATTTTGCAAGAAGGTCTTCCGAAATAGTGTCTTCTTTTATCCCGACTGCCAAGAAATACT
TTTATTATGATGCGTTTGATAATTCGTTTTAATTGTTTGTTTGAATTGATAGACACC
| PIRSF |
Cdc6/18 (IPR016314) - T[13-193] 370.0 - T[173-708] 1.7E-127 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[332-554] 6.08E-36 |
| Pfam |
AAA+_ATPase (IPR003593) - T[359-479] 6.9E-14 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[604-703] 9.79E-20 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[606-704] 4.6E-17 |
| CDD |
Cdc6_C (IPR015163) - T[607-690] 3.35975E-14 |
| SMART |
Cdc6_C (IPR015163) - T[614-694] 2.1E-16 |
| Pfam |
Cdc6_C (IPR015163) - T[614-693] 7.8E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC6_HUMAN | 43.898 % | 383 | 3.39E-125 |
| ORC1_HUMAN | 27.623 % | 130 | 1.92E-31 |