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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'Haaura.CG.MTP2014.S5...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  5. Transcript 'Boleac.CG.SB_v3.S956...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S956.g15566.01.t

Possible name(s)

BRAP; USP44; USP49

Gene model

Boleac.CG.SB_v3.S956.g15566

Location

S956 [13,540 / 35,532]

Sequences

Amino acid sequence

Length: 761

>Boleac.CG.SB_v3.S956.g15566.01.p
MTLCLIHIRLSVAPGRDIPNLHFESDLGTDKDTLEKLNFTSLADFHSNKLSLADKTSISP
MKPSKTKAEQPDDINLEGMDVADRSKVATKLMGRRKYKEVQIETFESNKNQEGNHSAVTE
ESAEKESRGEDGNENIGAASGGCDIQEVISKTTQEILKRSSGSFSSNKDEAELSEILQRS
SSMPPMAPSSSSGKKTPSSEILQRSSSMPPMAPSSSSGKKTPSRVFSNPSRQLASPSLST
TSKSYFSGNPAVQITHGIIQLYKTNYMVNYDEGSRPPPTKMLCMLCVPASVDAHSILEFT
SGFCDTIKRLHIIRDRTPNQYMVLMLFSSKKAAASFYFTFNGVPFSTLVEEDVCHLAFVA
SVEALPSMHSSMEKDATGLMPIIHSTELPDCVLCLERMDESVRGVLTILCNHSFHGSCLQ
NCPVCRYLQTPEPQSDNRCLVCGSVEDLWICLICGNVGCGRYTHECAKQHYMDTHHNYAM
ALKDNRVWDYAGVCRYLQTPEPQSDNRCLVCGSVEDLWICLICGNVGCGRYTHECAKQHY
MDTHHNYAMALKDNRVWDYAGDYFVHRLFQNKEDGKLVEHKSSDDGLEERESKIEAIQLE
CMYLLTSQLDSQRKHWEERLAKVEEIAAADRNSADVQMAESLRKLEMLEKDRTALEKKNQ
HLSSKYSSSLRELSTETELNNGLRKNQEEWRAKVTSLEILTKSQQNEIQDLKEQVRDLMF
FLEAQKTVDGAEQDVKEDIQAGQIVLGASGGQKKKRRSKPK

Nucleotide sequence

Length: 2,422

>Boleac.CG.SB_v3.S956.g15566.01.t
GCAGATTATNAAATTATGAATTCTAGATACCATAGCTTCAAGCATTTTTGAGTATTTGAN
AAGATTTTCAATGACTCTTTGCTTAATTCATATACGTCTCAGTGTTGCCCCTGGAAGAGA
TATTCCGAATCTTCATTTCGAATCTGACCTTGGAACTGACAAGGATACGTTAGAAAAATT
GAACTTCACAAGCCTNGCGGATTTTCACTCTAATAAACTGTCTTTGGCGGATAAAACAAG
CATATCACCGATGAAACCCAGCAAAACAAAAGCGGAACAGCCTGATGACATCAATTTGGA
AGGAATGGACGTCGCAGACCGGAGCAAAGTCGCTACAAAATTAATGGGCCGTAGAAAATA
TAAAGAAGTTCAAATTGAGACCTTTGAAAGCAACAAGAATCAAGAAGGAAATCACTCTGC
AGTCACTGAAGAGAGTGCGGAGAAGGAATCTCGTGGTGAAGATGGTAATGAAAACATTGG
TGCTGCATCAGGAGGGTGTGATATTCAAGAGGTCATTTCTAAAACAACGCAAGAAATCTT
GAAACGATCTTCTGGCTCTTTTTCCTCGAACAAAGATGAGGCAGAGCTGAGTGAAATATT
GCAAAGAAGCTCGTCTATGCCACCTATGGCACCATCGTCAAGTAGTGGCAAGAAAACTCC
TTCAAGTGAAATATTGCAAAGAAGCTCGTCTATGCCACCTATGGCACCATCGTCAAGTAG
TGGCAAGAAAACTCCTTCAAGGGTATTCAGTAATCCAAGTCGACAATTAGCTTCTCCTTC
GTTATCAACTACCAGCAAGTCATATTTCTCTGGCAATCCCGCTGTTCAGATTACCCACGG
AATAATTCAACTTTACAAGACCAACTACATGGTTAATTATGATGAAGGTTCTCGACCGCC
ACCAACAAAAATGCTCTGCATGTTATGTGTTCCTGCTTCTGTCGATGCACACAGTATTCT
AGAGTTCACTTCAGGATTTTGTGACACTATAAAGCGCTTGCACATTATCAGAGACCGCAC
GCCTAATCAATACATGGTGCTCATGTTATTCTCAAGCAAAAAAGCTGCTGCCAGTTTTTA
TTTTACATTCAATGGTGTACCATTCAGCACTTTGGTCGAAGAGGATGTATGTCATCTNGC
TTTCGTTGCATCTGTTGAAGCTTTGCCATCCATGCACTCTTCCATGGAGAAAGATGCGAC
NGGTCTTATGCCTATCATCCACAGCACAGAATTACCCGATTGTGTCTTATGCTTGGAGAG
AATGGACGAGTCAGTACGTGGAGTTCTCACCATTCTTTGCAACCATTCCTTTCATGGATC
TTGCTTGCAGAATTGCCCGGTGTGTCGGTACCTTCAAACCCCGGAACCTCAAAGCGATAA
CAGATGTTTGGTGTGTGGCAGTGTGGAGGACTTATGGATATGTTTAATATGTGGAAATGT
CGGATGTGGCAGATATACACATGAATGTGCAAAGCAACATTACATGGACACACACCACAA
TTATGCAATGGCTTTGAAAGACAATCGAGTGTGGGATTATGCTGGTGTGTGTCGGTACCT
TCAAACCCCGGAACCTCAAAGCGATAACAGATGTTTGGTGTGTGGCAGTGTGGAGGACTT
ATGGATATGTTTGATATGTGGAAATGTCGGATGTGGCAGATATACACATGAATGTGCAAA
GCAACATTACATGGACACACACCACAATTATGCAATGGCTTTGAAAGACAATCGAGTGTG
GGATTATGCTGGTGATTACTTTGTTCATCGTTTGTTCCAAAATAAGGAAGATGGGAAGTT
AGTTGAGCATAAAAGTTCTGATGATGGATTGGAAGAACGAGAATCTAAAATTGAAGCGAT
TCAGTTGGAGTGCATGTACCTTCTGACCAGTCAGTTGGATTCGCAGAGAAAACACTGGGA
AGAAAGGCTGGCAAAAGTCGAAGAGATTGCTGCTGCTGATAGAAATTCTGCTGATGTACA
GATGGCGGAATCTTTGCGAAAACTGGAAATGTTAGAAAAAGATAGGACGGCGCTTGAGAA
GAAGAACCAGCATCTATCATCCAAATATTCATCATCACTCAGGGAATTATCTACTGAAAC
GGAGTTGAATAATGGGTTACGGAAAAACCAGGAGGAATGGAGAGCGAAGGTGACATCTCT
GGAGATTCTCACAAAGTCGCAACAAAACGAAATACAAGATTTGAAGGAGCAGGTTCGAGA
TTTGATGTTTTTTCTCGAAGCACAGAAAACCGTCGATGGTGCCGAACAAGATGTCAAAGA
AGACATACAGGCTGGGCAAATCGTGTTGGGAGCATCGGGAGGACAAAAAAAGAAGCGACG
ATCAAAACCGAAATAGCCGACACTTGTATATTTTGCACTTTTGTCTTAGTCTGACACTTT
CAAGTTCTGTTTTTGTGCAATA

InterProScan

ProDom
BRAP2 (IPR011422) - T[244-363] 4.0E-27
Pfam
BRAP2 (IPR011422) - T[278-366] 1.3E-24
ProSiteProfiles
Znf_RING (IPR001841) - T[391-426] 10.026
SMART
Znf_RING (IPR001841) - T[391-425] 5.5E-6
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[417-495] 2.6E-18 - T[496-585] 7.5E-22
ProSiteProfiles
Znf_UBP (IPR001607) - T[437-498] 15.38 - T[506-567] 17.785
SMART
Znf_UBP (IPR001607) - T[438-487] 9.9E-19 - T[507-556] 9.9E-19
Pfam
Znf_UBP (IPR001607) - T[439-491] 9.8E-16 - T[508-567] 1.2E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BRAP_HUMAN 48.649 % 292 1.68E-89