- Transcript 'KH2012:KH.S1598.1.v1...' >
- Transcript 'Mooccu.CG.ELv1_2.S31...' >
- Transcript 'Boleac.CG.SB_v3.S95....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S95.g15517.01.t
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
S95 [95,811 / 106,249]
Amino acid sequence
Length: 817
>Boleac.CG.SB_v3.S95.g15517.01.p
MSSQASERSLRHKTVKVYDDDEVEDEIDGKRTFDVMEKIKSNKYDAECVQELRSEEFSFN
YIQRNGFYSPIRFMEKDHLGLRVPDSENFGIMDIQTYVGAKRMLDVMECVTQRAMEMTMK
DFARYFESEERKRVYNVISLEFSQTKLAPLVKRPAVVDKMDWIDLAWPPHLKYEQSEQTN
KMSNMKYPKVQKYCLMSVGGCYTDFHVDFGGTSVWYHIMKGEKIFWLIPPTKKNLDVYER
WTMSGKQGDLFFGDLVDKCQRIHLSTGNSLMIPSGWIHAVYTPVDSIVFGGNFLHSFNIP
MQLRVAQLEERLHVPPRFRFPYFQEVLWYAVERYVCSMTGQSFLTEEYQTRSMITKKQED
GGNNGVNEEDNALPEKKYVHMTPYELKGLQHLVESLGSDCGKCVYCKDMRKFGGPGTMKQ
SCLLRRCTNPLLPSTKRPEGSTPISDTPTLHDGVPEVEPEEEEEESPAIKKCKVSRYQNS
ENGASKTPKIEKVKISKDQSPLVPRVTVPRLKRHQLMKYAVRPAEEKVESFSMGVQDNGE
DVTVDRLAWMQVFKRLPQEDLCRCMCVCKAFLRWCSDPVFWRTIDLSESPISADALRCLV
RRQPSTIDLTRSYVSSDQLEWLIKRCPSLKSLNLTGNSWPLVAALASASCPQLHVLNLSW
VSGLTDSLLKQLIMPPGDARPGQQVTHTRLRFLKHLSLNGTDTTNAGVSLLPQELAYLQS
VDLSYCSVSDKAIRCLVSAANDKNCPELNTIIARSCPDITSKSLKHVTEFRNMSKVDFSD
CCQITEKDCLDVLHKHVTKRLEMVEIGLLIASQPSTL
Nucleotide sequence
Length: 2,842
>Boleac.CG.SB_v3.S95.g15517.01.t
CATCGCTGATCAATAGTTTCTGTGAGTAGGCTACATTTGGGATACTGCTGCCATGAGTAG
CCAAGCAAGTGAACGAAGTTTGAGGCACAAGACTGTAAAGGTCTATGATGATGATGAGGT
TGAGGATGAAATTGATGGAAAAAGGACATTTGACGTAATGGAGAAAATAAAAAGCAATAA
GTATGATGCGGAATGTGTCCAGGAACTTAGATCAGAAGAATTCTCGTTCAACTACATCCA
AAGAAATGGCTTTTACAGTCCTATTCGTTTCATGGAAAAGGACCATCTAGGATTGCGAGT
TCCTGATTCAGAAAATTTTGGGATCATGGATATTCAGACCTATGTCGGAGCAAAGCGAAT
GCTAGATGTAATGGAATGTGTTACGCAGAGAGCCATGGAAATGACAATGAAAGATTTTGC
AAGATATTTTGAGAGTGAAGAAAGGAAAAGAGTCTACAATGTCATATCTCTTGAATTTTC
TCAAACAAAGCTTGCTCCACTTGTTAAACGACCTGCAGTTGTGGACAAGATGGACTGGAT
AGATCTCGCCTGGCCTCCTCACTTGAAGTATGAGCAGAGCGAGCAGACAAACAAAATGTC
AAACATGAAGTATCCAAAGGTTCAAAAGTACTGCCTTATGTCTGTTGGAGGTTGTTACAC
TGACTTTCATGTGGATTTTGGTGGCACCTCAGTCTGGTATCATATAATGAAGGGTGAAAA
GATCTTTTGGTTAATCCCACCAACAAAGAAAAACTTGGATGTTTATGAACGTTGGACCAT
GTCTGGGAAGCAAGGTGATCTGTTCTTTGGTGACCTTGTGGACAAATGCCAGAGAATCCA
CTTGAGTACGGGGAATTCGTTGATGATCCCCAGTGGATGGATTCATGCTGTTTACACACC
TGTAGATTCTATTGTTTTTGGTGGGAATTTTCTTCATTCTTTCAATATTCCAATGCAACT
TCGAGTTGCTCAGCTTGAAGAAAGGCTTCATGTTCCTCCTCGCTTCAGATTTCCATACTT
TCAAGAGGTATTGTGGTACGCGGTTGAAAGGTATGTCTGCAGTATGACAGGTCAATCATT
TCTTACTGAAGAGTATCAAACGCGTTCAATGATCACCAAAAAACAAGAGGACGGAGGCAA
CAATGGAGTCAATGAGGAGGATAACGCCCTGCCAGAGAAGAAATATGTGCATATGACACC
ATATGAGTTAAAAGGATTGCAGCATCTTGTGGAATCCCTTGGAAGTGATTGTGGAAAATG
TGTCTATTGCAAAGACATGCGGAAATTTGGTGGGCCTGGAACGATGAAGCAATCGTGTTT
ACTCAGAAGATGCACCAATCCCTTACTGCCATCAACAAAACGGCCTGAAGGTAGCACTCC
AATTTCTGATACCCCAACACTGCATGATGGAGTTCCAGAGGTGGAGCCGGAGGAGGAAGA
AGAAGAATCTCCTGCAATCAAGAAGTGTAAAGTGTCTAGATATCAAAACTCCGAGAATGG
AGCATCAAAGACTCCAAAAATTGAAAAAGTAAAAATCAGCAAGGATCAATCTCCATTGGT
TCCTCGTGTTACTGTACCACGTTTAAAAAGACACCAGCTAATGAAGTACGCCGTCAGACC
TGCTGAGGAAAAGGTAGAATCATTTTCCATGGGAGTGCAGGATAATGGAGAGGATGTAAC
GGTTGATAGACTGGCTTGGATGCAGGTTTTCAAAAGGCTGCCGCAGGAAGACCTATGCCG
TTGCATGTGTGTATGTAAAGCCTTCTTAAGGTGGTGCTCGGATCCAGTGTTTTGGAGAAC
GATTGACCTGTCGGAATCACCCATATCAGCCGATGCCTTGCGATGCCTTGTAAGGCGGCA
GCCAAGCACTATTGACCTGACACGAAGCTATGTTTCAAGTGACCAATTGGAGTGGCTCAT
CAAACGTTGTCCTAGCCTAAAAAGTTTAAATTTAACGGGCAATTCCTGGCCTCTCGTGGC
TGCCTTAGCATCGGCATCATGCCCACAGTTGCACGTTCTCAATTTATCATGGGTTTCGGG
ATTAACTGACTCTTTACTGAAGCAGCTTATCATGCCACCTGGAGATGCNCGACCCGGTCA
ACAAGTTACACATACACGNTTAAGATTTTTGAAGCACCTTTCATTAAATGGAACTGATAC
CACCAATGCTGGTGTGTCTCTATTGCCTCAAGAGTTGGCATACCTTCAGTCAGTTGACCT
TAGTTATTGCAGTGTCTCTGACAAAGCCATTCGATGTCTCGTGTCTGCTGCTAATGACAA
AAACTGCCCGGAATTGAACACAATTATTGCAAGAAGCTGCCCCGATATTACTTCAAAATC
ACTGAAGCATGTCACTGAATTTCGGAACATGTCGAAAGTTGATTTCAGTGATTGCTGCCA
GATTACGGAAAAGGATTGCCTGGACGTTTTGCATAAACACGTAACGAAGCGCTTGGAAAT
GGTTGAAATAGGCTTGCTAATTGCAAGTCAGCCATCTACTTTGTGAAGCAGCATAAAATA
ACTTCCTGTTAGAGCCGTTGCCGCGCTATTTGCCAAGGCTGGCAACGATCGGCGTTTTCA
AAGAAACTGGCTGAATGTTCGACTTCCTAAGTGGTATGTAATGCACAGTCGTTCGTTTGA
GAGGGCATTTTCCGTTATGTTTGCTCGTTCGTACATTTCATGACCTCTCAATTGCCATAG
GTGAAAGACGAATATATTTTCATTTCTTGTGTTCTACTTTTTCATTATGTCGACCATTAT
GTTTCGTTGACGTGGAAGTATACTTGACGGTTTTGTCTGATTGTCTCCTGATACCTCGAA
TTATTGTGAGATGTGCGTTCAC
| SMART |
JmjC_dom (IPR003347) - T[142-310] 9.7E-32 |
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[142-310] 26.204 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[373-428] 8.807 |
| Pfam |
Znf_CXXC (IPR002857) - T[398-427] 6.3E-10 |
| Pfam |
F-box_dom (IPR001810) - T[548-585] 1.9E-8 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[548-812] 5.4E-42 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[650-675] 100.0 - T[715-739] 7.8 - T[745-770] 12.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 51.5 % | 440 | 7.96E-139 |
| KDM2B_HUMAN | 53.409 % | 419 | 8.42E-130 |
| PHF8_HUMAN | 43.302 % | 293 | 2.9E-85 |