Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.101.v2.A.SL1-1

Possible name(s)

RPS19

Gene model

KH2012:KH.C10.101

Location

KhC10 [1,087,825 / 1,089,986]

Sequences

Amino acid sequence

Length: 148

>KH.C10.101.v2.A.SL1-1
MSGVTVKDVNQQDFVMALAAHLKKSGKMKVPEWVDLIKTGKHKELSPYNPDWYYVRCAST
IRHLYIRGGVGVKSFIKIYGGRKRRGTKPSHFCAGSSSVARKVLQSLESIKLVTKDEIGG
RRITPSGQRDLDRIAGQVAAKKRDMKTV

Nucleotide sequence

Length: 686

>KH2012:KH.C10.101.v2.A.SL1-1
ATGTCTGGGGTTACAGTAAAGGATGTGAACCAGCAAGACTTCGTGATGGCTTTGGCCGCA
CATTTAAAAAAGTCGGGTAAGATGAAGGTCCCTGAGTGGGTTGACTTGATCAAGACCGGC
AAACACAAGGAACTCTCCCCCTACAACCCCGATTGGTATTACGTGCGTTGTGCGTCCACC
ATTCGCCACCTTTACATTCGTGGGGGTGTCGGTGTCAAATCATTCATTAAGATTTATGGA
GGTCGTAAGAGGAGAGGGACCAAGCCTTCCCACTTCTGTGCAGGATCATCTTCTGTTGCT
CGTAAAGTTCTCCAATCCCTTGAATCAATTAAGTTGGTAACTAAGGATGAGATTGGTGGT
CGCAGAATCACACCCAGTGGTCAGCGAGATCTTGATAGAATTGCAGGACAAGTCGCTGCA
AAGAAACGAGACATGAAGACCGTTTAAATAAAATCCACTACATTCAAACCATTGCTTTAC
TGTCTGATATCCTTAACTTCACAGGTCTTAACTATAAGAAAGTCTCTTGCATGAAATAGA
AGAAAACCTTAACAGTTTCCACATTCTTGCTGAGTGTATGTTTGTCACCCAATGGCTTAG
TAGCAAGACGCTTTGCATAGTATTAAGGATTCGAGGTTAGATGCTGGTCACATACTGTTA
CTATAAATTAAATGTGTTGTTGAGCG

InterProScan

Gene3D	Ribosomal_S19e_sf (IPR038111) - T[1-146] 3.3E-64
PANTHER	Ribosomal_S19e (IPR001266) - T[4-139] 7.6E-56
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[4-142] 7.07E-60
Pfam	Ribosomal_S19e (IPR001266) - T[5-140] 2.3E-60
ProDom	Ribosomal_S19e (IPR001266) - T[5-119] 2.0E-43
SMART	Ribosomal_S19e (IPR001266) - T[5-141] 6.6E-92
ProSitePatterns	Ribosomal_S19e_CS (IPR018277) - T[89-108] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS19_HUMAN	71.429 %	216	1.33E-73