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TRANSCRIPT CARD

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  1. Clone 'cien132642' > 
  2. Clone 'ciad066p19' > 
  3. Clone 'cien102975' > 
  4. Clone 'cima8113718' > 
  5. Transcript 'KH2012:KH.C10.105.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.105.v1.A.SL1-1

Possible name(s)

TOMM34; TOMM70; TTC1

Gene model

KH2012:KH.C10.105

Location

KhC10 [984,819 / 992,538]

Sequences

Amino acid sequence

Length: 612

>KH.C10.105.v1.A.SL1-1
NKRFWKVFLPLAILNSNMSDNISGEGSWPTWKIALAVGVPVVIAGVGIYYLRTGSKTKTQ
DLLLEDAEKPTAKDARSEPEGSSSPNRSSQLSVNVSSENASVSKPKSKFQEAQDLKNEGN
RLFKQGKYEEAIEKYSEAIAVCPDNHNTEKSTYHQNKAAAMEKMERWGDVVYECTAAINL
NQRYVKALHRRSKAYERLDQKENCLEDITTVCILEGFQNNSTMMYADSILKQIGKEKAEK
KYKNRKPMMPSPIFIKQYFASFNDDLISAVLTEEQRSSADNRFIRLKHIHIYSGYIRAKI
ALEDGNYSTVIQECSAEINSSEDAAPSYLPDALLLRGTFYLLSGNSDEAKPDLDRVIDMK
QAHPKLRANALIKRGSMSMQLQKPEDAETDFELAVQIDQENCDVFHHRGQLNILLDKVDL
ALADFDKCIALNPNFAMAHAQRCYTMYRQSHSKKDVVKTEEAMNKFNDIISQYPHCSETY
GLYAQAQTDCGNFEKADSLFQDAIKIEPDNATLFVHRGLLALQWKQDVEKAVSLISKALE
IDEKCDFAHETMGTIEVQRGNLEKACKHFAVSIDFAKSELEMAHLYALQAAALAQGNIAK
KYGLRPPMPGGI

Nucleotide sequence

Length: 2,264

>KH2012:KH.C10.105.v1.A.SL1-1
ATGTAAAATAAGCGTTTTTGGAAGGTTTTTTTACCCTTAGCAATATTAAATTCCAATATG
TCTGATAATATATCTGGCGAAGGGTCCTGGCCAACATGGAAAATTGCATTAGCTGTCGGC
GTGCCAGTTGTAATTGCTGGTGTTGGCATCTATTACTTAAGAACTGGTTCGAAAACCAAA
ACACAAGATTTGTTGCTGGAAGACGCAGAAAAACCTACCGCCAAAGATGCAAGAAGTGAA
CCAGAAGGAAGCTCATCACCTAATAGATCTTCCCAGTTATCTGTGAATGTATCTTCTGAA
AATGCTTCTGTAAGCAAACCAAAGTCAAAATTTCAAGAAGCGCAAGATTTAAAAAATGAA
GGAAACCGATTGTTCAAGCAAGGCAAATATGAGGAGGCAATTGAAAAATATTCTGAAGCA
ATCGCTGTGTGTCCTGATAACCATAACACTGAAAAATCTACTTATCATCAAAACAAAGCA
GCAGCGATGGAAAAAATGGAACGTTGGGGAGATGTAGTTTATGAATGCACTGCTGCAATT
AATCTTAACCAAAGATATGTCAAGGCTCTTCACAGGCGATCTAAGGCTTATGAGAGATTG
GATCAGAAAGAAAACTGCCTTGAAGATATCACAACTGTGTGCATTCTCGAAGGCTTCCAA
AACAACAGCACCATGATGTATGCTGATTCTATTTTAAAGCAAATTGGAAAGGAGAAGGCT
GAAAAGAAATACAAGAATCGCAAACCAATGATGCCTTCCCCCATTTTCATCAAGCAATAT
TTTGCAAGTTTTAATGATGATCTTATATCTGCTGTATTAACTGAGGAACAACGAAGTTCT
GCTGATAACAGATTCATAAGATTAAAACATATTCATATTTACAGTGGATACATTCGTGCA
AAGATAGCGCTTGAAGATGGTAATTACTCTACAGTGATACAAGAATGTTCGGCAGAAATC
AATTCAAGTGAAGATGCCGCCCCATCCTACTTGCCCGATGCTTTACTTTTAAGAGGAACA
TTCTATTTACTATCCGGGAATTCCGATGAAGCAAAACCTGACCTGGACCGAGTAATTGAC
ATGAAACAAGCACATCCTAAGTTGAGAGCCAATGCACTTATCAAGCGAGGAAGCATGAGT
ATGCAACTACAGAAACCCGAGGATGCTGAAACTGACTTCGAACTAGCTGTTCAAATAGAT
CAAGAGAATTGTGATGTTTTCCATCATCGTGGACAGCTCAACATATTATTGGACAAAGTT
GATCTTGCACTGGCTGACTTTGACAAATGTATCGCGCTTAATCCTAATTTTGCAATGGCT
CATGCCCAAAGGTGTTATACCATGTACAGACAATCGCATTCTAAGAAGGACGTCGTAAAA
ACAGAAGAAGCCATGAACAAGTTTAACGACATTATTTCGCAATATCCGCATTGCTCCGAA
ACATATGGTTTATATGCACAGGCCCAAACCGATTGTGGAAACTTTGAGAAAGCCGACAGT
TTATTTCAAGATGCAATCAAGATTGAACCTGACAATGCTACACTGTTTGTTCATAGAGGG
TTGTTAGCTTTGCAATGGAAGCAAGATGTAGAGAAAGCTGTAAGTTTGATTTCTAAAGCT
TTGGAAATTGATGAGAAATGTGATTTTGCTCATGAGACTATGGGGACGATAGAAGTGCAA
AGAGGTAACTTGGAAAAAGCTTGCAAACACTTTGCTGTTTCAATCGACTTTGCAAAGTCC
GAATTGGAAATGGCACATTTATATGCATTGCAAGCTGCAGCTCTTGCTCAAGGCAATATT
GCTAAGAAATATGGTTTGCGTCCTCCTATGCCTGGTGGTATTTGAAATCCATCAACATCT
ACAAATTACTTTAAAAGGGAAATTATAATCTCCAATCCGGCTTTGATCTTGTTGAATTCT
TGCTTTGTTCTGAGCTGGTGCATCGTGGACCAAAAAAAGCCTTCAAATTCAATTTAATTA
TGTTCAATAAAACACAGTAAATAGGATAGATCATTTTAAATCAACTTAATAGTATTTGGG
TGGTCATTAAAACTGAAAGAATGAATCACCTTATCGTGGCGCTTGCGACAAATAAAACAA
AATTCTGACACAACAGCGTTAAACACTGGACGATATAGATAAAAGCAGAAATTGGTTCTT
GGTTAAAAAAACGAGTTACTGCGTTTGTAACTTAGTGGGATATTGTTTTTAATGTTTGAT
CGACAATTTAGACAACAAATAAAGGACCACTGGGAATACAAGTA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[96-215] 2.0E-27 - T[216-604] 2.8E-73
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[109-214] 4.98E-21 - T[357-580] 4.55E-25
SMART
TPR_repeat (IPR019734) - T[112-145] 1.1E-4 - T[151-184] 300.0 - T[185-218] 130.0 - T[330-363] 0.52 - T[368-401] 0.026 - T[402-435] 0.012 - T[477-510] 13.0 - T[511-545] 96.0
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[112-145] 12.056 - T[330-579] 32.099
ProSiteProfiles
TPR_repeat (IPR019734) - T[112-145] 11.21 - T[330-363] 7.346 - T[368-401] 7.906 - T[402-435] 8.29 - T[477-510] 10.178 - T[546-579] 5.871
Pfam
TPR_repeat (IPR019734) - T[478-510] 0.004

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TOM70_HUMAN 51.724 % 612 0