- Transcript 'KH2012:KH.C14.618.v1...' >
- Clone 'ciad069j05' >
- Transcript 'KH2012:KH.C3.199.v1....' >
- Transcript 'KH2012:KH.C10.118.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.118.v1.A.SL1-1
Possible name(s)
MID1; TRIM67; TRIM9
Gene model
Location
KhC10 [60,790 / 75,576]
Amino acid sequence
Length: 904
>KH.C10.118.v1.A.SL1-1
AMEEELQCPVCHCIFNDPVILPCTHNVCFQCANTLIHKVIDLPPAYNIETSFPHHEPDKV
SLLSETVLSDSDSGYSASSASSGTSDTPTPSSSTPTIVTSDPFSSLVPTHTVTQASTTTT
PTGVNLPALPDSISCLTCPICHRASFVDDRGVNGLPRNKAMNSIVGRYTRTIDSSLRPPT
LSPNASPVRKPPISPKKPATPVLRRHTKTVHNCQICEGDPANEASVKCLQCEVLYCASCR
DRCHPPRGPLARHTLVDVDADKPEPTRRPAYPTLPNKPSLKNGVRLPSCSHHPTEKTSLY
CSSCHLPLCVLCQDEGRHKNHDLKPIGALYKSRKSQLSQQMGSLSSKARQAKDLVMSLRG
MPSEIEKSSTELESKTVTQLDHLMSLLQRKKDELLQKIAKERETKCKIVQDQLQQSTMKL
RNTTGLLEYCIEVMKDNDPSAFLQVSQSLTERVSCNEQQWNGRNLISKTKPEFDMDIVTS
PLAMEIENLDFFQMKVPGKPSIRADECGARNNTVTLSWLPAPNSIVDSFRLEMDDGNNGN
YREVYAGKETVCTVDGLHFNSVYRARVRAVNKAGPSPHSDPLQLQTSEGGATKYTQNKNQ
ANRWYKQIYISPKIRSSFYIIQLNFYDYFTKLNIDSTVASFQWDPTQGHCDVRLSNNNCT
VTSNSFDDRVVLGSVGFSRGIHYWEFSVDRYEGRPDPSFGVAFYDVDKSQLLGKESRGWG
MYIDESRSWLMHANEHSNRHEVGIKVGSRVGVLLDIARSLLSFYVDGKPQGNPMTLPTSQ
GNYHPSGRKQALYFPAISVNRNVEVTLHTGLRSPIQPLQLYRNRMQESSSYSGFSRIQKS
PDCPHRGRNLSSSDLRLPSMEAKKFPPPPPIRRGGSTGNMSTRSDGESSDSTSAKSLRSF
FHKK
Nucleotide sequence
Length: 3,498
>KH2012:KH.C10.118.v1.A.SL1-1
ATTCATCAAAGCAAAGCATTGTGTTAGATAAATAAGACGTTGTGTACGTCATTATACTGC
GTTTATTTCGTCATACTCTGCATTGTGATATTTGGATGTATATTGAGCAATGGAGGAAGA
ACTGCAGTGTCCTGTATGTCATTGTATATTCAATGATCCAGTGATATTACCTTGCACACA
TAACGTATGTTTCCAGTGTGCTAATACATTGATACACAAGGTAATTGATCTTCCACCTGC
GTACAACATTGAAACCAGTTTTCCCCACCACGAACCAGACAAAGTCAGTTTATTGAGTGA
GACTGTCCTCAGTGATTCAGATAGCGGTTACTCGGCTTCGTCAGCTTCAAGTGGGACTTC
CGACACCCCGACACCCTCAAGTTCGACGCCTACTATTGTCACCAGCGACCCTTTCAGTTC
ACTCGTACCCACGCACACAGTGACGCAGGCTTCTACTACAACAACACCAACCGGTGTGAA
CTTACCGGCGTTGCCAGATTCCATATCTTGCCTTACGTGTCCGATTTGCCACCGAGCGTC
GTTCGTGGACGATAGAGGAGTGAACGGACTTCCACGAAACAAAGCTATGAACTCCATAGT
TGGAAGATACACACGAACCATTGACAGCAGTTTACGCCCACCAACTTTATCTCCCAACGC
AAGCCCGGTTAGAAAACCTCCCATCTCCCCGAAGAAACCTGCGACTCCCGTATTACGCAG
ACACACAAAGACTGTTCATAATTGTCAGATATGCGAGGGCGATCCAGCGAACGAAGCGAG
CGTTAAATGCCTTCAATGCGAAGTCCTTTACTGCGCATCATGTAGAGATAGATGCCATCC
ACCCCGTGGACCCTTAGCAAGGCACACGCTAGTCGATGTAGACGCTGATAAACCAGAACC
AACCCGACGCCCCGCCTACCCCACTTTACCCAACAAACCAAGCCTCAAAAACGGGGTCCG
ACTCCCATCTTGCTCCCACCATCCCACCGAAAAGACGAGTTTATATTGTTCGTCATGTCA
TCTTCCTCTGTGTGTCCTCTGTCAGGATGAAGGAAGACATAAGAACCACGATCTTAAACC
GATTGGAGCGCTTTACAAATCCCGCAAGAGTCAGCTAAGTCAACAAATGGGTTCGTTATC
AAGTAAGGCTCGCCAAGCTAAAGACCTCGTGATGTCACTTAGAGGGATGCCATCTGAGAT
TGAGAAATCTTCCACTGAACTTGAATCAAAGACAGTGACGCAATTGGATCACTTGATGTC
GCTGTTACAGCGGAAGAAAGATGAACTTCTTCAGAAGATCGCGAAAGAACGCGAAACAAA
GTGTAAAATCGTTCAAGACCAACTTCAACAATCCACAATGAAGTTACGAAACACAACAGG
ATTGTTGGAATATTGTATTGAAGTCATGAAGGACAACGACCCATCTGCTTTTCTACAGGT
GTCACAAAGTTTAACCGAACGCGTATCGTGCAACGAACAACAATGGAATGGAAGAAACCT
TATTTCGAAAACCAAACCCGAATTCGATATGGATATTGTGACGTCACCATTAGCCATGGA
AATCGAGAACCTTGACTTCTTCCAAATGAAAGTTCCAGGCAAACCAAGTATACGAGCCGA
CGAATGCGGCGCAAGGAACAACACAGTAACATTATCTTGGCTTCCTGCTCCTAACTCCAT
CGTTGATAGCTTCAGACTTGAGATGGATGATGGGAACAATGGAAATTATCGGGAGGTATA
CGCTGGCAAGGAAACTGTTTGTACCGTGGACGGATTGCATTTTAACAGCGTATACAGAGC
CAGAGTACGAGCTGTAAATAAAGCTGGACCAAGTCCACATAGCGACCCTTTGCAACTACA
AACATCGGAAGGTGGTGCTACGAAATACACACAAAATAAAAACCAAGCAAACCGATGGTA
TAAACAAATATATATTTCTCCTAAAATAAGATCATCATTCTATATTATTCAACTAAATTT
TTACGATTATTTTACTAAATTAAACATCGATTCTACAGTTGCAAGCTTCCAATGGGACCC
TACTCAAGGTCATTGTGACGTCAGATTATCAAACAATAACTGCACTGTGACGTCAAACAG
CTTCGACGATCGAGTGGTGCTCGGTAGCGTCGGCTTTTCAAGGGGAATACATTATTGGGA
ATTCTCCGTGGATCGTTATGAAGGCAGGCCCGATCCTTCGTTTGGTGTGGCGTTTTATGA
CGTAGATAAGAGCCAATTGCTAGGTAAAGAGTCACGTGGTTGGGGGATGTATATTGACGA
ATCGAGGAGTTGGCTCATGCACGCTAATGAACATTCAAACAGACACGAAGTTGGTATAAA
GGTCGGATCGAGGGTTGGCGTTTTACTTGACATCGCAAGAAGCCTGTTGTCGTTTTACGT
CGATGGAAAGCCCCAGGGGAATCCCATGACGCTACCTACGTCACAGGGGAATTACCATCC
ATCAGGACGAAAACAAGCGCTGTATTTTCCCGCCATTAGCGTGAATAGAAACGTGGAGGT
GACTCTACACACAGGATTAAGATCTCCCATCCAACCTCTTCAACTTTACCGGAACAGGAT
GCAAGAATCATCCTCTTACTCCGGGTTCTCTCGCATCCAGAAGTCCCCGGACTGCCCACA
CCGAGGTCGGAACCTCAGCTCCTCTGATCTTCGCTTGCCATCCATGGAAGCAAAGAAGTT
TCCTCCCCCTCCTCCCATTAGAAGAGGAGGATCAACAGGGAACATGAGCACGAGGAGTGA
TGGGGAATCCTCCGATTCAACATCAGCTAAATCTTTGCGATCTTTCTTCCATAAAAAATA
ATCTTCTTTGCCAAATCTTCTTTTAAATCTTGAGAGTCCTCAGAGGAGTAATTTCCATCT
TCAGACTAGAAGAAGATGAAGAGATCCGTAGAGTCATCTCTATTGATGAATAATTACTCT
CCAAGAGGGATAAGAGAGTTGTGAATATCTTAAAAAGATATATTCATTTAGGAATCTGTT
TCTTCATTGCATTACACAGTTGTTTAAGTAGTTGTTAACAGAAGGACTTTTAATGTATCC
CAGTGTTATGACTGTTGTAGGCACCAATATTATAAGGATATATTCTCTGTATTCTATATG
GGTAAATTCCACAGCAGAGCACGCCAAGTGGCCTGGTATTTAGAACAGCGTTTTACCCAT
TACCATTAGTACCAACTATTTTCATACCCAATCTTTCATAATTATTTTAAATGCTTTTAC
TTTTAAACAACAACTTGCACTAAACATACCCACAAAGTGGTTTTACCCCAGCTTTTTTAA
AATAGGTCATTTTATCAAATTGTTTGCCTTTCACGCTTCACTGATCTGTTCATTATTTGC
AAACAATCAGCGTTGTTGCATCACTACTTAATTAATCGCCCGATGTTTCAAGCTTAAGCA
ACAAATTTTTTTGCTTTTACATTTTGTTGGCATGTTATTTGTAAATTTTATTCAAATGCA
AAGAAATATAAAAAGAAA
| SMART |
Znf_RING (IPR001841) - T[8-141] 2.7E-5 |
| SMART |
Znf_B-box (IPR000315) - T[208-258] 0.063 - T[284-326] 9.0E-4 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[211-258] 8.717 - T[284-326] 12.244 |
| Pfam |
Znf_B-box (IPR000315) - T[286-326] 2.7E-9 |
| CDD |
Znf_B-box (IPR000315) - T[287-326] 1.38549E-6 |
| SMART |
Bbox_C (IPR003649) - T[333-459] 7.0E-11 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[434-492] 11.738 |
| Gene3D |
Ig-like_fold (IPR013783) - T[492-592] 1.0E-21 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[496-589] 17.625 |
| CDD |
FN3_dom (IPR003961) - T[497-586] 1.51165E-13 |
| SMART |
FN3_dom (IPR003961) - T[497-576] 3.2E-8 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[509-587] 8.7E-17 |
| Pfam |
FN3_dom (IPR003961) - T[510-578] 1.3E-7 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[621-814] 16.908 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[635-823] 2.64E-36 |
| SMART |
SPRY_dom (IPR003877) - T[679-811] 0.0018 |
| Pfam |
SPRY_dom (IPR003877) - T[681-809] 4.3E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRIM1_HUMAN | 22.886 % | 167 | 3.96E-43 |
| TRIM9_HUMAN | 41.048 % | 616 | 0 |
| TRI67_HUMAN | 37.998 % | 571 | 0 |