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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'
  2. Clone 'AHC0AAA191YD09'
  3. Transcript 'Phmamm.CG.MTP2014.S2...'
  4. Transcript 'KH2012:KH.C10.13.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.13.v1.A.nonSL3-1

Possible name(s)

TAF1B

Location

KhC10 [3,317,468 / 3,322,265]

Sequences

Amino acid sequence

Length: 673

>KH.C10.13.v1.A.nonSL3-1
KHFFSNCNNESHSNKLVCFELLAILSVANSSQARTKMPVCPVCDSKEYDICNGLYFCRIC
STQSQDIVEEDLENATESVVGRFIDRKQRRKSKRVPNFTIDPGKPWFTVEGLQALLKCQV
QALISLGCSKRLDKVVQQIWFKYVHKCGMAVIDPQVPVSGKPAPQCSSFRDNYLNGVFGD
NKPKDNPFPTTKNLVMLRASSLGKRRKESSSSSEEDPITPKKGRLKIKTPKKEEKERVIP
SDEEWFSLASGVESAESDTSYHSSASTMSAASFKKLANKKFNHWGRERRKAGVLCKAKLL
SILYVALQWCKELITPGDLLNWVKQGYLPYIDALLCLEPHMKISDYDGANLQRNIIPSYK
QFVKVSRLLEEYVEMPPLPDVDISSLMARFVIQVNLPLEIISFINNLIRINNFKYTRANV
RTTALTGYAPDLISCALIVVALKLLYGINDVTEWTAGNGNKNCDKKQENDETSHICRNFE
WKSWMQYHLNRRKERMQNPRILFDVRDAEKVVDIHSYFEHWDEVILNSQLHNKETTGGRH
RLKSIETKQWVMRKLVEAQGSLDEIQRRAQLRENPFVFPAPTEEEDMKSMCICKGLDRLK
SGSMEYVLIQNPNSNKQLKDRINFTEYSDSYKFLLSIFSEITAAEREKIHHEVWKMEKYF
ILDCVKKEIKEKK

Nucleotide sequence

Length: 2,034

>KH2012:KH.C10.13.v1.A.nonSL3-1
CTAAACACTTTTTCAGTAATTGCAACAATGAATCACACAGTAATAAACTAGTTTGTTTCG
AACTGCTTGCAATTCTTTCTGTTGCAAACTCAAGCCAGGCAAGAACCAAAATGCCTGTGT
GCCCTGTATGCGATTCCAAAGAATACGACATCTGCAACGGGCTTTATTTTTGTCGCATAT
GCAGCACGCAATCGCAGGATATAGTTGAAGAGGATCTTGAAAACGCTACAGAAAGTGTCG
TAGGAAGGTTTATTGATAGAAAACAGAGAAGGAAAAGTAAACGTGTTCCAAATTTCACAA
TCGATCCTGGAAAACCTTGGTTTACAGTAGAAGGATTACAGGCACTGTTAAAATGTCAGG
TCCAGGCTCTAATATCACTTGGATGTTCAAAGCGTTTGGACAAAGTGGTGCAGCAGATTT
GGTTCAAATATGTTCACAAGTGTGGAATGGCAGTGATTGACCCTCAGGTTCCTGTATCTG
GAAAACCTGCACCCCAATGTTCATCTTTTCGGGACAATTATTTAAACGGGGTATTTGGGG
ACAATAAACCAAAAGATAACCCCTTTCCTACAACTAAAAACTTGGTAATGCTCCGTGCTT
CATCATTAGGAAAGAGAAGGAAAGAGTCTTCCTCAAGTTCTGAGGAGGACCCGATCACGC
CAAAAAAAGGACGACTTAAAATAAAAACACCAAAAAAGGAAGAGAAAGAGCGTGTAATTC
CATCAGATGAAGAATGGTTCTCTCTTGCTTCAGGTGTGGAAAGTGCTGAATCAGACACGT
CATACCACAGTTCTGCTTCTACAATGTCTGCTGCAAGCTTCAAAAAACTTGCGAACAAGA
AATTCAATCATTGGGGCCGTGAAAGACGAAAGGCTGGTGTTTTGTGCAAAGCCAAGCTTT
TATCCATTCTATATGTAGCTCTTCAGTGGTGTAAAGAACTTATAACTCCTGGTGACCTGC
TAAATTGGGTGAAGCAAGGCTACTTACCGTACATAGATGCTTTGCTTTGCCTGGAGCCGC
ATATGAAGATTTCAGATTATGATGGTGCAAACTTACAAAGAAATATCATTCCAAGTTATA
AACAGTTTGTGAAGGTGTCAAGATTATTAGAGGAGTACGTGGAAATGCCTCCTCTTCCGG
ATGTTGACATCTCCTCCCTGATGGCTCGCTTTGTCATCCAGGTCAATCTTCCTCTGGAGA
TAATCTCTTTCATCAATAATCTCATCCGCATCAACAACTTTAAATACACAAGGGCAAATG
TTAGAACAACAGCCCTTACAGGTTATGCACCAGATCTCATCTCATGCGCTCTCATTGTAG
TGGCTCTGAAGTTGTTGTATGGTATCAATGATGTAACAGAGTGGACTGCTGGCAATGGTA
ATAAAAACTGTGACAAGAAGCAAGAAAATGATGAAACGTCGCATATATGTCGAAATTTTG
AATGGAAATCCTGGATGCAGTATCATCTAAACAGAAGGAAAGAAAGGATGCAAAACCCCA
GGATTCTCTTCGATGTAAGAGATGCAGAGAAAGTTGTGGATATCCACTCTTACTTTGAGC
ATTGGGATGAAGTTATACTTAATTCTCAACTACACAATAAAGAAACAACTGGTGGAAGGC
ATCGACTAAAATCAATTGAAACGAAACAGTGGGTTATGAGGAAACTTGTTGAAGCTCAAG
GGAGTTTGGATGAGATCCAGAGGCGGGCTCAGCTCCGGGAAAATCCTTTTGTCTTCCCAG
CTCCAACTGAGGAGGAGGATATGAAGAGCATGTGCATCTGCAAAGGGTTGGACCGGCTAA
AAAGTGGGAGTATGGAGTATGTGTTGATACAAAACCCAAATAGTAACAAGCAACTGAAAG
ACAGAATTAATTTCACTGAATATTCCGACTCCTACAAATTCTTGCTTTCAATTTTCTCTG
AAATAACCGCAGCTGAAAGAGAAAAAATTCATCACGAAGTTTGGAAAATGGAAAAATATT
TTATTTTGGACTGTGTAAAAAAAGAAATAAAAGAAAAAAAATAATTTTTGTTTG

InterProScan

Pfam
TF_Rrn7_Zf (IPR021752) - T[35-65] 1.9E-6
PANTHER
TAF1B/Rrn7 (IPR033599) - T[37-660] 6.1E-88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value