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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'AHC0AAA191YD09' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'KH2012:KH.C10.13.v1....' > 
  5. Transcript 'KH2012:KH.C10.13.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.13.v1.A.nonSL4-1

Possible name(s)

TAF1B

Gene model

KH2012:KH.C10.13

Location

KhC10 [3,317,468 / 3,322,165]

Sequences

Amino acid sequence

Length: 640

>KH.C10.13.v1.A.nonSL4-1
RTKMPVCPVCDSKEYDICNGLYFCRICSTQSQDIVEEDLENATESVVGRFIDRKQRRKSK
RVPNFTIDPGKPWFTVEGLQALLKCQVQALISLGCSKRLDKVVQQIWFKYVHKCGMAVID
PQVPVSGKPAPQCSSFRDNYLNGVFGDNKPKDNPFPTTKNLVMLRASSLGKRRKESSSSS
EEDPITPKKGRLKIKTPKKEEKERVIPSDEEWFSLASGVESAESDTSYHSSASTMSAASF
KKLANKKFNHWGRERRKAGVLCKAKLLSILYVALQWCKELITPGDLLNWVKQGYLPYIDA
LLCLEPHMKISDYDGANLQRNIIPSYKQFVKVSRLLEEYVEMPPLPDVDISSLMARFVIQ
VNLPLEIISFINNLIRINNFKYTRANVRTTALTGYAPDLISCALIVVALKLLYGINDVTE
WTAGNGNKNCDKKQENDETSHICRNFEWKSWMQYHLNRRKERMQNPRILFDVRDAEKVVD
IHSYFEHWDEVILNSQLHNKETTGGRHRLKSIETKQWVMRKLVEAQGSLDEIQRRAQLRE
NPFVFPAPTEEEDMKSMCICKGLDRLKSGSMEYVLIQNPNSNKQLKDRINFTEYSDSYKF
LLSIFSEITAAEREKIHHEVWKMEKYFILDCVKKEIKEKK

Nucleotide sequence

Length: 1,934

>KH2012:KH.C10.13.v1.A.nonSL4-1
AAGAACCAAAATGCCTGTGTGCCCTGTATGCGATTCCAAAGAATACGACATCTGCAACGG
GCTTTATTTTTGTCGCATATGCAGCACGCAATCGCAGGATATAGTTGAAGAGGATCTTGA
AAACGCTACAGAAAGTGTCGTAGGAAGGTTTATTGATAGAAAACAGAGAAGGAAAAGTAA
ACGTGTTCCAAATTTCACAATCGATCCTGGAAAACCTTGGTTTACAGTAGAAGGATTACA
GGCACTGTTAAAATGTCAGGTCCAGGCTCTAATATCACTTGGATGTTCAAAGCGTTTGGA
CAAAGTGGTGCAGCAGATTTGGTTCAAATATGTTCACAAGTGTGGAATGGCAGTGATTGA
CCCTCAGGTTCCTGTATCTGGAAAACCTGCACCCCAATGTTCATCTTTTCGGGACAATTA
TTTAAACGGGGTATTTGGGGACAATAAACCAAAAGATAACCCCTTTCCTACAACTAAAAA
CTTGGTAATGCTCCGTGCTTCATCATTAGGAAAGAGAAGGAAAGAGTCTTCCTCAAGTTC
TGAGGAGGACCCGATCACGCCAAAAAAAGGACGACTTAAAATAAAAACACCAAAAAAGGA
AGAGAAAGAGCGTGTAATTCCATCAGATGAAGAATGGTTCTCTCTTGCTTCAGGTGTGGA
AAGTGCTGAATCAGACACGTCATACCACAGTTCTGCTTCTACAATGTCTGCTGCAAGCTT
CAAAAAACTTGCGAACAAGAAATTCAATCATTGGGGCCGTGAAAGACGAAAGGCTGGTGT
TTTGTGCAAAGCCAAGCTTTTATCCATTCTATATGTAGCTCTTCAGTGGTGTAAAGAACT
TATAACTCCTGGTGACCTGCTAAATTGGGTGAAGCAAGGCTACTTACCGTACATAGATGC
TTTGCTTTGCCTGGAGCCGCATATGAAGATTTCAGATTATGATGGTGCAAACTTACAAAG
AAATATCATTCCAAGTTATAAACAGTTTGTGAAGGTGTCAAGATTATTAGAGGAGTACGT
GGAAATGCCTCCTCTTCCGGATGTTGACATCTCCTCCCTGATGGCTCGCTTTGTCATCCA
GGTCAATCTTCCTCTGGAGATAATCTCTTTCATCAATAATCTCATCCGCATCAACAACTT
TAAATACACAAGGGCAAATGTTAGAACAACAGCCCTTACAGGTTATGCACCAGATCTCAT
CTCATGCGCTCTCATTGTAGTGGCTCTGAAGTTGTTGTATGGTATCAATGATGTAACAGA
GTGGACTGCTGGCAATGGTAATAAAAACTGTGACAAGAAGCAAGAAAATGATGAAACGTC
GCATATATGTCGAAATTTTGAATGGAAATCCTGGATGCAGTATCATCTAAACAGAAGGAA
AGAAAGGATGCAAAACCCCAGGATTCTCTTCGATGTAAGAGATGCAGAGAAAGTTGTGGA
TATCCACTCTTACTTTGAGCATTGGGATGAAGTTATACTTAATTCTCAACTACACAATAA
AGAAACAACTGGTGGAAGGCATCGACTAAAATCAATTGAAACGAAACAGTGGGTTATGAG
GAAACTTGTTGAAGCTCAAGGGAGTTTGGATGAGATCCAGAGGCGGGCTCAGCTCCGGGA
AAATCCTTTTGTCTTCCCAGCTCCAACTGAGGAGGAGGATATGAAGAGCATGTGCATCTG
CAAAGGGTTGGACCGGCTAAAAAGTGGGAGTATGGAGTATGTGTTGATACAAAACCCAAA
TAGTAACAAGCAACTGAAAGACAGAATTAATTTCACTGAATATTCCGACTCCTACAAATT
CTTGCTTTCAATTTTCTCTGAAATAACCGCAGCTGAAAGAGAAAAAATTCATCACGAAGT
TTGGAAAATGGAAAAATATTTTATTTTGGACTGTGTAAAAAAAGAAATAAAAGAAAAAAA
ATAATTTTTGTTTG

InterProScan

Pfam
TF_Rrn7_Zf (IPR021752) - T[2-32] 1.8E-6
PANTHER
TAF1B/Rrn7 (IPR033599) - T[5-627] 5.7E-88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value