Aniseed - Transcript Card

Transcript 'KH2012:KH.C10.133.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.133.v1.A.ND1-1

Possible name(s)

PCYT1A; PCYT1B; PCYT2

Gene model

KH2012:KH.C10.133

Location

KhC10 [4,012,435 / 4,018,686]

Sequences

Amino acid sequence

Length: 373

>KH.C10.133.v1.A.ND1-1
FIIVSTFASVMLVKTPRKRSSKRNSASPTEKLDEKDDDVHILKPKLRKTSLANGSTRPQG
LYKPAIFADDAENGLSEPEPYVRISKEEAMEEGSRPARVYADGIYDMFHSGHARALMQAK
NLFPNTHLIVGVCNDELTHKNKGRTVMSERERYEALRHCRYVDEVVRNAPWTLDEDFLKK
HRIDFVAHDDIPYAASGSEDVYKHIKAAGMFCATQRTEGISTSDVITRIVKDYDVYVRRN
LQRGYSAKELNISFIREKKISVQNTVDNVKDKLKDMGERYKELVGKLEDQTHELLDKWKE
RSNDFVRNFIEMYGTMNQYKEQIIEAISPGRLSPTASPQNRLPIADTEYESPRSPAFLVN
EAAGNLHAFNNEE

Nucleotide sequence

Length: 1,957

>KH2012:KH.C10.133.v1.A.ND1-1
CGTTTATTTACTTACAGCTGCTGGTCGCTCCAAAGTGCGATATATATGAACTGGAATAAC
CCCGATTGCCTTTTTTCTTTCGTAATCATACAGTAATTGCGTCACCAGATAACAAATGCA
AGAAACGCTCGGTTTAGTTGTTGTTGTTTTGCACTGAGTTGTCTATGTGGAATAATTTAT
TATCGTTAGCACCTTTGCAAGCGTGATGTTAGTTAAAACTCCACGAAAACGATCCAGCAA
AAGGAACAGTGCTTCTCCAACTGAAAAGTTGGACGAAAAAGACGACGATGTGCATATTTT
GAAACCAAAGCTTCGAAAAACTTCATTGGCAAATGGGTCAACACGACCACAGGGTTTATA
TAAGCCTGCGATATTTGCTGATGATGCAGAAAATGGACTTTCCGAACCTGAACCATATGT
TCGAATATCTAAAGAAGAAGCAATGGAAGAAGGCAGTAGACCTGCAAGGGTATATGCCGA
TGGTATATATGATATGTTTCACTCTGGACATGCAAGAGCACTAATGCAGGCGAAGAATTT
GTTTCCAAACACCCATTTAATTGTTGGAGTGTGCAATGACGAACTGACTCATAAGAACAA
AGGGCGCACTGTAATGTCTGAGAGAGAGCGTTACGAAGCTTTAAGACACTGTCGGTACGT
TGATGAAGTGGTTCGTAACGCACCTTGGACTTTGGATGAGGATTTTCTTAAAAAGCACAG
AATTGATTTTGTTGCTCATGATGATATCCCATACGCAGCAAGTGGTTCTGAGGACGTATA
TAAACATATAAAGGCAGCAGGCATGTTTTGTGCAACCCAGAGAACTGAAGGTATCTCAAC
ATCCGATGTTATTACTCGGATAGTGAAGGATTACGATGTTTATGTGCGACGTAATTTACA
GAGAGGATATTCCGCTAAGGAACTTAATATTAGTTTCATAAGGGAGAAAAAGATCAGTGT
TCAAAACACGGTTGATAATGTAAAGGACAAACTAAAAGACATGGGGGAGAGGTACAAAGA
GTTGGTTGGAAAACTAGAAGACCAAACGCACGAATTGCTTGATAAATGGAAGGAAAGATC
AAACGATTTTGTTCGTAACTTTATAGAGATGTATGGAACAATGAACCAATACAAGGAACA
AATAATAGAAGCCATATCTCCTGGTCGTCTGAGCCCTACAGCATCACCACAAAACAGACT
TCCAATTGCTGATACGGAGTATGAAAGCCCTAGGTCACCAGCATTCTTGGTAAACGAAGC
GGCCGGGAACCTGCACGCATTCAATAATGAAGAATAAAACCTGCCTTCTGTTTCCAAAGA
TCCCTTTCCGAAATTTCTCTTGTCGGCATACCTATTTGCCAACTGCAATTGAACTAGGCG
ACTTCTAATTCTGCAGTATGTAGTTTTGAATGGTAATTTGATTCTTTCATACCGTACTGC
GTCGTGTTTTAACGGTGCAGTACGTTTTTCCATACTTCCGGACCGCTCAAGAGTGATGAC
CAGCAAACTACAATTCCCGTTACTTGCATGGCGCTGGATGCCGTGTCGGAAACACTGTTT
CATTTTTTACCAGTGTTAATCTAATTTCGTATCATAAATGAAATATGTAGTACAATGTGT
ATTCCGTCGTATATACTGTTCTCTTTAAGGCGAAAGATATTCTTTCTTCCATAAACTTGC
TTCTCGTTATAATCCTACCTTTTTCTATCGCTTTTTCCTGGCGTTTGCTATTTTAACCGC
CGGTCAAAGTCCAGCAATCTTCTAATTCTAAGTTGCTGATGTAGGCGACCTTTGAGCGGA
TAGGAGCTGCCACTGTGCCCGTTTCTGGACAAGAGCTGTAAATTCTGGTTCCAAATGCGT
GGTAACCTATAACTGTGGCGCGGGAACGGACTAAACAGAGAAATATTTCGTGTTTTCTTG
TTAGAAATGCAATAAATATATTCTATACATATAAAAA

InterProScan

Gene3D	Rossmann-like_a/b/a_fold (IPR014729) - T[60-286] 6.1E-94
TIGRFAM	Cyt_trans-like (IPR004821) - T[98-165] 8.2E-21
Pfam	Cyt_trans-like (IPR004821) - T[100-228] 3.3E-31

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PCY1B_HUMAN	61.071 %	367	3.46E-126
PCY1A_HUMAN	61.667 %	349	4.71E-119
PCY2_HUMAN	40.288 %	105	2.64E-25