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  1. Clone 'AHC0AAA38YM16' > 
  2. Transcript 'KH2012:KH.C10.140.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.140.v1.A.SL1-1

Possible name(s)

HDAC4; HDAC5; HDAC9

Gene model

KH2012:KH.C10.140

Location

KhC10 [1,862,441 / 1,875,433]

Sequences

Amino acid sequence

Length: 1,101

>KH.C10.140.v1.A.SL1-1
LCISRHNVDLYTEGNDELRTVTNGLGPQDTNENEHRMAVDPAVSALTPNFLAAVYGMGER
QYQEKLKRMRHQHEIENQLLMAQFNYQTSNLQHQHQLQQHLNHVISKQRERVAEQMAALD
QRSELINSVRNKEKNRESAVASNAVKQHLQKFVKCRQKFKDSHPSMERSPLQWTPSLEGK
NGGHEVPAHYSSLLHTQYDFPLRKTASEPNLKLKSRLKQKLLEDRVERSSPLMPRRGDIK
ADLANRIKKKINIENVNEQRNSHNSAPNSGPSSPPNSSNDIKQSTPHMQTETDYYEESNS
SGNHDLYSSPSLPNISIGLTNKKSTDRSMLVVSEELSKRGTRGSSLSDPMIQSDKPLFQS
HAKLHEIDLTQAVQANLLPPHKTVLHAQASTPPGPIRHSQTTRQHKALSRTQSAPTAASQ
LQLHILQRRQKMLQQQQKKGLMHGVAEVDSHSYSILPTHLETEDGEQWVKRNQYSHAQST
PNQPFIPSNKIASTQAQLVASKPEIPDSMLPMFINKHSGRFGFLTCPAVARVAIEEGGIA
GTRHLPPQSTIPIHSQPSSLSDQNKPRLLRTQSSPATSFIKKLPHFKKYRYTTGIAYSPV
MLKHGCACRDDHTEHAGRLRAIWERLTKSKLVNDPSCGGTSGKSSCELLEARKATTDELQ
LVHTQEHTLRYGTTSLARKELELTSKFIVLPCGGVGVDNGIDIDTVWNELDTINAARMAV
GCTVDITLEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYFNSVAVAARKLQHECPDTVRR
VLIVDWDVHHCNGTQNIFFDDPSVLVISIHRYDSGNFFPGTGAINECGRGGGLGYNVNIG
FSGGLDPPMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPSTLGGYKLTPNCY
GLLTRLLSEVAGGKIVLVLEGGFELEPLCDCTEACVRTLLGNHEYSNLSMESMERRPSKN
AIDTIKNVITIQEKHWKGLDLSSVDMSHLEWLRVSRENETCVAMASLSVENKSGNEPNTI
SEPEAHQQPVDLSNNKSTYQQPHQSADVYFYENCGGSMSADSSPLDVVGLSTPSSPATKQ
SDTMDTMNQTSTTESQPMAGV

Nucleotide sequence

Length: 4,619

>KH2012:KH.C10.140.v1.A.SL1-1
TCTTACGTGACTTATTATTGTATAGTGGCATACAAGAAACTGTTGATTTGTCAGCCATAG
TTATGCATAAGTAGGCACAACGTTGATTTGTACACAGAGGGAAATGATGAACTTCGAACT
GTAACAAATGGGCTTGGACCTCAAGATACAAATGAAAATGAACACAGAATGGCTGTAGAC
CCTGCAGTTTCAGCACTGACTCCAAATTTTCTTGCTGCTGTTTATGGCATGGGAGAACGG
CAGTATCAGGAAAAATTGAAAAGAATGAGGCATCAGCATGAAATTGAAAATCAGCTGTTA
ATGGCGCAGTTCAACTACCAAACAAGCAATTTGCAACATCAACATCAATTGCAACAACAC
TTGAATCATGTTATCTCGAAGCAAAGGGAACGTGTTGCTGAACAGATGGCAGCACTTGAC
CAAAGAAGTGAACTGATTAATTCTGTTCGGAACAAAGAGAAAAACAGAGAAAGTGCTGTT
GCATCAAATGCTGTCAAGCAGCATCTACAAAAGTTTGTAAAATGCCGACAAAAATTCAAA
GATTCACACCCTAGTATGGAGAGGTCTCCATTGCAATGGACACCATCTTTAGAAGGAAAA
AATGGAGGTCATGAAGTACCAGCACATTATTCCTCATTATTACACACACAATATGACTTT
CCACTAAGGAAAACAGCTTCGGAACCAAACCTCAAGTTGAAGTCGCGTTTAAAACAGAAG
TTGTTGGAGGACAGAGTTGAAAGGTCGTCACCACTCATGCCACGTCGCGGAGATATTAAG
GCAGATCTTGCAAATCGAATCAAGAAAAAAATAAATATAGAAAATGTTAACGAACAAAGG
AATTCACACAACAGCGCTCCAAACTCTGGACCAAGTTCCCCTCCTAATTCATCAAATGAC
ATCAAACAATCAACACCACACATGCAAACAGAGACTGATTATTATGAAGAATCAAATTCA
TCTGGAAACCATGACCTTTATTCGTCGCCCTCTCTTCCAAATATTTCTATTGGACTTACA
AATAAAAAATCAACTGATCGTAGCATGCTTGTTGTGTCAGAGGAGTTAAGCAAGCGAGGA
ACCCGAGGATCCTCACTTTCCGATCCGATGATTCAAAGTGATAAACCATTATTTCAGAGC
CATGCAAAGCTACATGAGATTGATCTAACACAAGCAGTGCAAGCTAACCTGCTGCCTCCA
CATAAGACAGTGCTACATGCCCAAGCATCCACCCCACCAGGACCAATACGTCACTCACAA
ACCACACGTCAACATAAAGCGTTGAGTCGGACACAATCAGCACCTACTGCTGCATCGCAG
TTGCAACTACATATTTTACAGCGACGTCAAAAAATGCTACAGCAGCAGCAGAAGAAAGGT
TTAATGCACGGTGTGGCTGAGGTTGATTCACATTCTTATTCAATCCTCCCCACCCACCTT
GAAACAGAGGATGGGGAACAATGGGTGAAACGGAATCAATACAGTCATGCGCAGTCAACA
CCAAACCAACCTTTCATTCCAAGTAACAAGATTGCTTCTACCCAAGCACAATTGGTAGCA
AGCAAACCTGAAATCCCAGATTCAATGCTACCTATGTTTATCAACAAACATTCTGGTAGA
TTTGGGTTTCTTACTTGTCCAGCAGTTGCACGAGTTGCCATAGAGGAAGGTGGAATCGCC
GGTACGCGACATCTGCCACCACAATCCACCATACCCATTCACAGCCAACCATCATCACTT
AGTGATCAGAATAAACCACGTCTTCTGCGAACACAGAGTTCACCAGCAACATCATTTATT
AAGAAGTTACCTCATTTTAAGAAATACAGATACACCACGGGCATAGCTTATAGTCCAGTG
ATGTTAAAGCACGGATGTGCCTGTCGTGACGACCACACAGAACACGCAGGTCGACTGCGT
GCAATTTGGGAGCGACTAACAAAATCGAAGCTGGTTAACGACCCAAGTTGTGGTGGTACA
TCAGGAAAATCTTCGTGTGAGTTACTGGAAGCAAGGAAAGCGACCACGGATGAGTTACAA
CTGGTGCATACACAGGAACATACATTGCGGTATGGGACAACTTCACTTGCGAGGAAAGAA
CTAGAATTGACAAGCAAGTTCATAGTTCTCCCATGTGGTGGTGTGGGCGTGGATAATGGA
ATTGACATCGATACTGTGTGGAATGAACTTGATACCATCAATGCAGCACGAATGGCTGTT
GGTTGTACGGTAGACATCACATTAGAAGTTGCACAGAATCGATTGAAGAATGGATTTGCT
CTCGTTCGACCACCAGGACATCATGCTCAGAAAGATCTTGCAATGGCTTTCTGTTACTTT
AACTCAGTAGCAGTGGCTGCAAGGAAATTACAACATGAATGTCCAGATACAGTGAGACGT
GTGCTTATAGTGGATTGGGATGTACATCATTGTAATGGAACTCAGAATATTTTCTTTGAT
GATCCATCAGTGCTTGTTATATCCATACATAGATATGATTCTGGGAACTTTTTTCCTGGA
ACTGGAGCCATTAATGAGTGTGGGCGTGGAGGAGGGCTTGGGTATAATGTGAACATAGGG
TTCAGTGGTGGGCTTGATCCTCCCATGGAAGATGCCGATTACTTGGCTGTTTTTCGCACA
ATTGTTCTTCCCATTGCCCGTCAGTTTGATCCTCACTTTGTCCTCGTGTCGTGCGGGTTC
TCGGCAGCCAACGGACATCCTTCAACACTAGGTGGCTACAAGCTGACCCCCAATTGTTAC
GGGTTGCTGACAAGATTATTATCTGAGGTAGCAGGTGGGAAGATAGTGTTGGTGTTGGAG
GGGGGGTTTGAACTTGAACCCTTGTGTGATTGCACGGAAGCTTGTGTTCGAACATTGCTT
GGCAACCATGAGTATTCTAATTTATCCATGGAAAGCATGGAGAGAAGGCCATCTAAAAAT
GCAATTGATACCATTAAAAATGTCATCACTATACAAGAAAAACACTGGAAAGGATTAGAT
TTATCATCTGTTGATATGAGTCATCTCGAGTGGTTGAGAGTTTCAAGAGAAAATGAAACT
TGTGTTGCTATGGCTTCACTTAGTGTGGAAAATAAATCTGGAAACGAACCCAACACTATA
TCAGAACCCGAAGCACACCAACAACCTGTGGATTTGTCAAATAACAAATCTACTTATCAG
CAACCTCATCAGTCCGCTGATGTGTATTTTTATGAAAACTGTGGTGGATCCATGAGTGCA
GATTCCTCACCATTAGATGTGGTTGGTTTGTCCACACCTTCATCACCTGCAACTAAACAA
TCAGATACCATGGATACAATGAACCAAACATCTACGACCGAGTCTCAACCCATGGCTGGT
GTATGACTATTTAATGGATAGACATGAAAGAATGAAACTTCAAGCGAATCTTGGAACGAG
CGTTTGTTGTTTACAATCTCATTCGTCACGCTTTATGTGCAATCTGTTCGCATGTCACTA
TTCGAAATGAAGTTGCAATGCTTAATCAACATTGAAAAAAAGTGATGGTGATCATTATTC
ATGGTAGGATTACTGAAGAGTGGACACACTGTGTAAAGAGAGTATCTGATTCAACATCTA
TTGTCACATAGATGCGCTATATGTGTCAAATCATGATTGTACAGCAGACCTCAATTTGTA
GTGTCCACGATGACTGAATATCCTCTCACCCCACACTCTATTGGTACGGTGCTGGGAAAC
AGATGTAATTTTAGCAAACCAGATGTAGTACTCCAACCCATCATTAGTGCTGCCAGGATA
TTCAAACTTGCTGTAATATTGCACATATTTCATGCTTTGAAGACTTTTTCTGCATCTTTT
TACCCGGTCACCACAAGGCAAGTTTCAGCTTTTTATTTTTTATACTTGCTCGGCAAAATG
TTTTAAATCCTGTGCCACTTTTTGGCAAACTATTTCTCGCTGCTTAGTATTAAAAATGTG
TTACGTGTATTTACGTAGGAATCGCTTCATTCTTATCATGGTTGCCAACATTATTAAGCT
GCCCAACTTGCAGCTTTGCGTATTTACTTTGGAGTAAGTATTTTTCTACTACGAAAATAT
TACTACAGTACATACATCTGAACAATGCTTTAACAACAAACACATCTAATTTCTATCATT
AAGTTTTTAATACTGGTTTAAACTGGTTCGAAATCCATTCGATTCAACATAATATTACTG
TTTAATTGGATCCTCTAATCATAACAAAATTTAAAATATAGTAGCAAATTAATTGTCTAT
TTGTTTGAACTGCACAAAGAAGCTTTGAACACATCATTCCATCACATTCCTTGTTTACAT
AATTTAATTTTGACTGTTCCATTTTCTTGATCATTGTTGCATAAGATTTTTATTAAGTGA
CCCTGTGCTGTGTATATATCCATATATATGATGTCCTGAAAAGCGCCCCTGCTGGTTACA
TCCGTTAAAAACTGTTTATGACGAATAAACGAAAAAGATTTTTGATACACAATACGTGGC
TTCTTGAATTTCGGAGGCTTGTGCTGCGACAGTTATAGACATAACGTTTAAAAATAAATG
GGTTCAAGGCTCATCATAATTGTGGGCGTATGTGTCCTTGGGCAAGACACTTAACGACA

InterProScan

PIRSF
Histone_deAcase_II_euk (IPR017320) - T[37-1030] 9.4E-223
PANTHER
His_deacetylse (IPR000286) - T[89-976] 0.0
Gene3D
His_deacetylse_dom_sf (IPR037138) - T[585-1003] 1.5E-148
SUPERFAMILY
Ureohydrolase_dom_sf (IPR023696) - T[590-978] 1.34E-101
Pfam
His_deacetylse_dom (IPR023801) - T[612-938] 4.7E-71
PRINTS
His_deacetylse (IPR000286) - T[744-767] 5.3E-13 - T[780-795] 5.3E-13 - T[871-881] 5.3E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HDAC4_HUMAN 50.976 % 472 1.62E-148
HDAC9_HUMAN 37.841 % 504 2.02E-161
HDAC7_HUMAN 47.619 % 444 2.55E-139





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