- Clone 'cima044g18' >
- Clone 'cien53273' >
- Transcript 'KH2012:KH.C10.140.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.140.v1.A.SL2-1
Possible name(s)
HDAC4; HDAC5; HDAC9
Gene model
Location
KhC10 [1,862,466 / 1,875,433]
Amino acid sequence
Length: 1,101
>KH.C10.140.v1.A.SL2-1
LCISRHNVDLYTEGNDELRTVTNGLGPQDTNENEHRMAVDPAVSALTPNFLAAVYGMGER
QYQEKLKRMRHQHEIENQLLMAQFNYQTSNLQHQHQLQQHLNHVISKQRERVAEQMAALD
QRSELINSVRNKEKNRESAVASNAVKQHLQKFVKCRQKFKDSHPSMERSPLQWTPSLEGK
NGGHEVPAHYSSLLHTQYDFPLRKTASEPNLKLKSRLKQKLLEDRVERSSPLMPRRGDIK
ADLANRIKKKINIENVNEQRNSHNSAPNSGPSSPPNSSNDIKQSTPHMQTETDYYEESNS
SGNHDLYSSPSLPNISIGLTNKKSTDRSMLVVSEELSKRGTRGSSLSDPMIQSDKPLFQS
HAKLHEIDLTQAVQANLLPPHKTVLHAQASTPPGPIRHSQTTRQHKALSRTQSAPTAASQ
LQLHILQRRQKMLQQQQKKGLMHGVAEVDSHSYSILPTHLETEDGEQWVKRNQYSHAQST
PNQPFIPSNKIASTQAQLVASKPEIPDSMLPMFINKHSGRFGFLTCPAVARVAIEEGGIA
GTRHLPPQSTIPIHSQPSSLSDQNKPRLLRTQSSPATSFIKKLPHFKKYRYTTGIAYSPV
MLKHGCACRDDHTEHAGRLRAIWERLTKSKLVNDPSCGGTSGKSSCELLEARKATTDELQ
LVHTQEHTLRYGTTSLARKELELTSKFIVLPCGGVGVDNGIDIDTVWNELDTINAARMAV
GCTVDITLEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYFNSVAVAARKLQHECPDTVRR
VLIVDWDVHHCNGTQNIFFDDPSVLVISIHRYDSGNFFPGTGAINECGRGGGLGYNVNIG
FSGGLDPPMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPSTLGGYKLTPNCY
GLLTRLLSEVAGGKIVLVLEGGFELEPLCDCTEACVRTLLGNHEYSNLSMESMERRPSKN
AIDTIKNVITIQEKHWKGLDLSSVDMSHLEWLRVSRENETCVAMASLSVENKSGNEPNTI
SEPEAHQQPVDLSNNKSTYQQPHQSADVYFYENCGGSMSADSSPLDVVGLSTPSSPATKQ
SDTMDTMNQTSTTESQPMAGV
Nucleotide sequence
Length: 4,594
>KH2012:KH.C10.140.v1.A.SL2-1
TGGCATACAAGAAACTGTTGATTTGTCAGCCATAGTTATGCATAAGTAGGCACAACGTTG
ATTTGTACACAGAGGGAAATGATGAACTTCGAACTGTAACAAATGGGCTTGGACCTCAAG
ATACAAATGAAAATGAACACAGAATGGCTGTAGACCCTGCAGTTTCAGCACTGACTCCAA
ATTTTCTTGCTGCTGTTTATGGCATGGGAGAACGGCAGTATCAGGAAAAATTGAAAAGAA
TGAGGCATCAGCATGAAATTGAAAATCAGCTGTTAATGGCGCAGTTCAACTACCAAACAA
GCAATTTGCAACATCAACATCAATTGCAACAACACTTGAATCATGTTATCTCGAAGCAAA
GGGAACGTGTTGCTGAACAGATGGCAGCACTTGACCAAAGAAGTGAACTGATTAATTCTG
TTCGGAACAAAGAGAAAAACAGAGAAAGTGCTGTTGCATCAAATGCTGTCAAGCAGCATC
TACAAAAGTTTGTAAAATGCCGACAAAAATTCAAAGATTCACACCCTAGTATGGAGAGGT
CTCCATTGCAATGGACACCATCTTTAGAAGGAAAAAATGGAGGTCATGAAGTACCAGCAC
ATTATTCCTCATTATTACACACACAATATGACTTTCCACTAAGGAAAACAGCTTCGGAAC
CAAACCTCAAGTTGAAGTCGCGTTTAAAACAGAAGTTGTTGGAGGACAGAGTTGAAAGGT
CGTCACCACTCATGCCACGTCGCGGAGATATTAAGGCAGATCTTGCAAATCGAATCAAGA
AAAAAATAAATATAGAAAATGTTAACGAACAAAGGAATTCACACAACAGCGCTCCAAACT
CTGGACCAAGTTCCCCTCCTAATTCATCAAATGACATCAAACAATCAACACCACACATGC
AAACAGAGACTGATTATTATGAAGAATCAAATTCATCTGGAAACCATGACCTTTATTCGT
CGCCCTCTCTTCCAAATATTTCTATTGGACTTACAAATAAAAAATCAACTGATCGTAGCA
TGCTTGTTGTGTCAGAGGAGTTAAGCAAGCGAGGAACCCGAGGATCCTCACTTTCCGATC
CGATGATTCAAAGTGATAAACCATTATTTCAGAGCCATGCAAAGCTACATGAGATTGATC
TAACACAAGCAGTGCAAGCTAACCTGCTGCCTCCACATAAGACAGTGCTACATGCCCAAG
CATCCACCCCACCAGGACCAATACGTCACTCACAAACCACACGTCAACATAAAGCGTTGA
GTCGGACACAATCAGCACCTACTGCTGCATCGCAGTTGCAACTACATATTTTACAGCGAC
GTCAAAAAATGCTACAGCAGCAGCAGAAGAAAGGTTTAATGCACGGTGTGGCTGAGGTTG
ATTCACATTCTTATTCAATCCTCCCCACCCACCTTGAAACAGAGGATGGGGAACAATGGG
TGAAACGGAATCAATACAGTCATGCGCAGTCAACACCAAACCAACCTTTCATTCCAAGTA
ACAAGATTGCTTCTACCCAAGCACAATTGGTAGCAAGCAAACCTGAAATCCCAGATTCAA
TGCTACCTATGTTTATCAACAAACATTCTGGTAGATTTGGGTTTCTTACTTGTCCAGCAG
TTGCACGAGTTGCCATAGAGGAAGGTGGAATCGCCGGTACGCGACATCTGCCACCACAAT
CCACCATACCCATTCACAGCCAACCATCATCACTTAGTGATCAGAATAAACCACGTCTTC
TGCGAACACAGAGTTCACCAGCAACATCATTTATTAAGAAGTTACCTCATTTTAAGAAAT
ACAGATACACCACGGGCATAGCTTATAGTCCAGTGATGTTAAAGCACGGATGTGCCTGTC
GTGACGACCACACAGAACACGCAGGTCGACTGCGTGCAATTTGGGAGCGACTAACAAAAT
CGAAGCTGGTTAACGACCCAAGTTGTGGTGGTACATCAGGAAAATCTTCGTGTGAGTTAC
TGGAAGCAAGGAAAGCGACCACGGATGAGTTACAACTGGTGCATACACAGGAACATACAT
TGCGGTATGGGACAACTTCACTTGCGAGGAAAGAACTAGAATTGACAAGCAAGTTCATAG
TTCTCCCATGTGGTGGTGTGGGCGTGGATAATGGAATTGACATCGATACTGTGTGGAATG
AACTTGATACCATCAATGCAGCACGAATGGCTGTTGGTTGTACGGTAGACATCACATTAG
AAGTTGCACAGAATCGATTGAAGAATGGATTTGCTCTCGTTCGACCACCAGGACATCATG
CTCAGAAAGATCTTGCAATGGCTTTCTGTTACTTTAACTCAGTAGCAGTGGCTGCAAGGA
AATTACAACATGAATGTCCAGATACAGTGAGACGTGTGCTTATAGTGGATTGGGATGTAC
ATCATTGTAATGGAACTCAGAATATTTTCTTTGATGATCCATCAGTGCTTGTTATATCCA
TACATAGATATGATTCTGGGAACTTTTTTCCTGGAACTGGAGCCATTAATGAGTGTGGGC
GTGGAGGAGGGCTTGGGTATAATGTGAACATAGGGTTCAGTGGTGGGCTTGATCCTCCCA
TGGAAGATGCCGATTACTTGGCTGTTTTTCGCACAATTGTTCTTCCCATTGCCCGTCAGT
TTGATCCTCACTTTGTCCTCGTGTCGTGCGGGTTCTCGGCAGCCAACGGACATCCTTCAA
CACTAGGTGGCTACAAGCTGACCCCCAATTGTTACGGGTTGCTGACAAGATTATTATCTG
AGGTAGCAGGTGGGAAGATAGTGTTGGTGTTGGAGGGGGGGTTTGAACTTGAACCCTTGT
GTGATTGCACGGAAGCTTGTGTTCGAACATTGCTTGGCAACCATGAGTATTCTAATTTAT
CCATGGAAAGCATGGAGAGAAGGCCATCTAAAAATGCAATTGATACCATTAAAAATGTCA
TCACTATACAAGAAAAACACTGGAAAGGATTAGATTTATCATCTGTTGATATGAGTCATC
TCGAGTGGTTGAGAGTTTCAAGAGAAAATGAAACTTGTGTTGCTATGGCTTCACTTAGTG
TGGAAAATAAATCTGGAAACGAACCCAACACTATATCAGAACCCGAAGCACACCAACAAC
CTGTGGATTTGTCAAATAACAAATCTACTTATCAGCAACCTCATCAGTCCGCTGATGTGT
ATTTTTATGAAAACTGTGGTGGATCCATGAGTGCAGATTCCTCACCATTAGATGTGGTTG
GTTTGTCCACACCTTCATCACCTGCAACTAAACAATCAGATACCATGGATACAATGAACC
AAACATCTACGACCGAGTCTCAACCCATGGCTGGTGTATGACTATTTAATGGATAGACAT
GAAAGAATGAAACTTCAAGCGAATCTTGGAACGAGCGTTTGTTGTTTACAATCTCATTCG
TCACGCTTTATGTGCAATCTGTTCGCATGTCACTATTCGAAATGAAGTTGCAATGCTTAA
TCAACATTGAAAAAAAGTGATGGTGATCATTATTCATGGTAGGATTACTGAAGAGTGGAC
ACACTGTGTAAAGAGAGTATCTGATTCAACATCTATTGTCACATAGATGCGCTATATGTG
TCAAATCATGATTGTACAGCAGACCTCAATTTGTAGTGTCCACGATGACTGAATATCCTC
TCACCCCACACTCTATTGGTACGGTGCTGGGAAACAGATGTAATTTTAGCAAACCAGATG
TAGTACTCCAACCCATCATTAGTGCTGCCAGGATATTCAAACTTGCTGTAATATTGCACA
TATTTCATGCTTTGAAGACTTTTTCTGCATCTTTTTACCCGGTCACCACAAGGCAAGTTT
CAGCTTTTTATTTTTTATACTTGCTCGGCAAAATGTTTTAAATCCTGTGCCACTTTTTGG
CAAACTATTTCTCGCTGCTTAGTATTAAAAATGTGTTACGTGTATTTACGTAGGAATCGC
TTCATTCTTATCATGGTTGCCAACATTATTAAGCTGCCCAACTTGCAGCTTTGCGTATTT
ACTTTGGAGTAAGTATTTTTCTACTACGAAAATATTACTACAGTACATACATCTGAACAA
TGCTTTAACAACAAACACATCTAATTTCTATCATTAAGTTTTTAATACTGGTTTAAACTG
GTTCGAAATCCATTCGATTCAACATAATATTACTGTTTAATTGGATCCTCTAATCATAAC
AAAATTTAAAATATAGTAGCAAATTAATTGTCTATTTGTTTGAACTGCACAAAGAAGCTT
TGAACACATCATTCCATCACATTCCTTGTTTACATAATTTAATTTTGACTGTTCCATTTT
CTTGATCATTGTTGCATAAGATTTTTATTAAGTGACCCTGTGCTGTGTATATATCCATAT
ATATGATGTCCTGAAAAGCGCCCCTGCTGGTTACATCCGTTAAAAACTGTTTATGACGAA
TAAACGAAAAAGATTTTTGATACACAATACGTGGCTTCTTGAATTTCGGAGGCTTGTGCT
GCGACAGTTATAGACATAACGTTTAAAAATAAATGGGTTCAAGGCTCATCATAATTGTGG
GCGTATGTGTCCTTGGGCAAGACACTTAACGACA
| PIRSF |
Histone_deAcase_II_euk (IPR017320) - T[37-1030] 9.4E-223 |
| PANTHER |
His_deacetylse (IPR000286) - T[89-976] 0.0 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[585-1003] 1.5E-148 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[590-978] 1.34E-101 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[612-938] 4.7E-71 |
| PRINTS |
His_deacetylse (IPR000286) - T[744-767] 5.3E-13 - T[780-795] 5.3E-13 - T[871-881] 5.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC4_HUMAN | 50.976 % | 472 | 1.62E-148 |
| HDAC9_HUMAN | 37.841 % | 504 | 2.02E-161 |
| HDAC7_HUMAN | 47.619 % | 444 | 2.55E-139 |