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  1. Clone 'citb013e22' > 
  2. Clone 'citb058a03' > 
  3. Clone 'AHC0AAA92YP03' > 
  4. Clone 'cien108213' > 
  5. Transcript 'KH2012:KH.C10.140.v2...'

Transcript Model

Transcript Id

KH2012:KH.C10.140.v2.A.SL3-1

Possible name(s)

HDAC4; HDAC5; HDAC9

Gene model

KH2012:KH.C10.140

Location

KhC10 [1,858,581 / 1,875,433]

Sequences

Amino acid sequence

Length: 1,095

>KH.C10.140.v2.A.SL3-1
KMAKREEGNDELRTVTNGLGPQDTNENEHRMAVDPAVSALTPNFLAAVYGMGERQYQEKL
KRMRHQHEIENQLLMAQFNYQTSNLQHQHQLQQHLNHVISKQRERVAEQMAALDQRSELI
NSVRNKEKNRESAVASNAVKQHLQKFVKCRQKFKDSHPSMERSPLQWTPSLEGKNGGHEV
PAHYSSLLHTQYDFPLRKTASEPNLKLKSRLKQKLLEDRVERSSPLMPRRGDIKADLANR
IKKKINIENVNEQRNSHNSAPNSGPSSPPNSSNDIKQSTPHMQTETDYYEESNSSGNHDL
YSSPSLPNISIGLTNKKSTDRSMLVVSEELSKRGTRGSSLSDPMIQSDKPLFQSHAKLHE
IDLTQAVQANLLPPHKTVLHAQASTPPGPIRHSQTTRQHKALSRTQSAPTAASQLQLHIL
QRRQKMLQQQQKKGLMHGVAEVDSHSYSILPTHLETEDGEQWVKRNQYSHAQSTPNQPFI
PSNKIASTQAQLVASKPEIPDSMLPMFINKHSGRFGFLTCPAVARVAIEEGGIAGTRHLP
PQSTIPIHSQPSSLSDQNKPRLLRTQSSPATSFIKKLPHFKKYRYTTGIAYSPVMLKHGC
ACRDDHTEHAGRLRAIWERLTKSKLVNDPSCGGTSGKSSCELLEARKATTDELQLVHTQE
HTLRYGTTSLARKELELTSKFIVLPCGGVGVDNGIDIDTVWNELDTINAARMAVGCTVDI
TLEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYFNSVAVAARKLQHECPDTVRRVLIVDW
DVHHCNGTQNIFFDDPSVLVISIHRYDSGNFFPGTGAINECGRGGGLGYNVNIGFSGGLD
PPMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPSTLGGYKLTPNCYGLLTRL
LSEVAGGKIVLVLEGGFELEPLCDCTEACVRTLLGNHEYSNLSMESMERRPSKNAIDTIK
NVITIQEKHWKGLDLSSVDMSHLEWLRVSRENETCVAMASLSVENKSGNEPNTISEPEAH
QQPVDLSNNKSTYQQPHQSADVYFYENCGGSMSADSSPLDVVGLSTPSSPATKQSDTMDT
MNQTSTTESQPMAGV

Nucleotide sequence

Length: 4,639

>KH2012:KH.C10.140.v2.A.SL3-1
ATATTTTAAGATTGTAGTTTAGTTTTGATATCTTGTAATAGTCTGTAAGGAACCAATTGC
AATGAAAAGTGATGACTAGAAGTCTACATTTATGCTGAAAAATGGCCAAAAGAGAAGAGG
GAAATGATGAACTTCGAACTGTAACAAATGGGCTTGGACCTCAAGATACAAATGAAAATG
AACACAGAATGGCTGTAGACCCTGCAGTTTCAGCACTGACTCCAAATTTTCTTGCTGCTG
TTTATGGCATGGGAGAACGGCAGTATCAGGAAAAATTGAAAAGAATGAGGCATCAGCATG
AAATTGAAAATCAGCTGTTAATGGCGCAGTTCAACTACCAAACAAGCAATTTGCAACATC
AACATCAATTGCAACAACACTTGAATCATGTTATCTCGAAGCAAAGGGAACGTGTTGCTG
AACAGATGGCAGCACTTGACCAAAGAAGTGAACTGATTAATTCTGTTCGGAACAAAGAGA
AAAACAGAGAAAGTGCTGTTGCATCAAATGCTGTCAAGCAGCATCTACAAAAGTTTGTAA
AATGCCGACAAAAATTCAAAGATTCACACCCTAGTATGGAGAGGTCTCCATTGCAATGGA
CACCATCTTTAGAAGGAAAAAATGGAGGTCATGAAGTACCAGCACATTATTCCTCATTAT
TACACACACAATATGACTTTCCACTAAGGAAAACAGCTTCGGAACCAAACCTCAAGTTGA
AGTCGCGTTTAAAACAGAAGTTGTTGGAGGACAGAGTTGAAAGGTCGTCACCACTCATGC
CACGTCGCGGAGATATTAAGGCAGATCTTGCAAATCGAATCAAGAAAAAAATAAATATAG
AAAATGTTAACGAACAAAGGAATTCACACAACAGCGCTCCAAACTCTGGACCAAGTTCCC
CTCCTAATTCATCAAATGACATCAAACAATCAACACCACACATGCAAACAGAGACTGATT
ATTATGAAGAATCAAATTCATCTGGAAACCATGACCTTTATTCGTCGCCCTCTCTTCCAA
ATATTTCTATTGGACTTACAAATAAAAAATCAACTGATCGTAGCATGCTTGTTGTGTCAG
AGGAGTTAAGCAAGCGAGGAACCCGAGGATCCTCACTTTCCGATCCGATGATTCAAAGTG
ATAAACCATTATTTCAGAGCCATGCAAAGCTACATGAGATTGATCTAACACAAGCAGTGC
AAGCTAACCTGCTGCCTCCACATAAGACAGTGCTACATGCCCAAGCATCCACCCCACCAG
GACCAATACGTCACTCACAAACCACACGTCAACATAAAGCGTTGAGTCGGACACAATCAG
CACCTACTGCTGCATCGCAGTTGCAACTACATATTTTACAGCGACGTCAAAAAATGCTAC
AGCAGCAGCAGAAGAAAGGTTTAATGCACGGTGTGGCTGAGGTTGATTCACATTCTTATT
CAATCCTCCCCACCCACCTTGAAACAGAGGATGGGGAACAATGGGTGAAACGGAATCAAT
ACAGTCATGCGCAGTCAACACCAAACCAACCTTTCATTCCAAGTAACAAGATTGCTTCTA
CCCAAGCACAATTGGTAGCAAGCAAACCTGAAATCCCAGATTCAATGCTACCTATGTTTA
TCAACAAACATTCTGGTAGATTTGGGTTTCTTACTTGTCCAGCAGTTGCACGAGTTGCCA
TAGAGGAAGGTGGAATCGCCGGTACGCGACATCTGCCACCACAATCCACCATACCCATTC
ACAGCCAACCATCATCACTTAGTGATCAGAATAAACCACGTCTTCTGCGAACACAGAGTT
CACCAGCAACATCATTTATTAAGAAGTTACCTCATTTTAAGAAATACAGATACACCACGG
GCATAGCTTATAGTCCAGTGATGTTAAAGCACGGATGTGCCTGTCGTGACGACCACACAG
AACACGCAGGTCGACTGCGTGCAATTTGGGAGCGACTAACAAAATCGAAGCTGGTTAACG
ACCCAAGTTGTGGTGGTACATCAGGAAAATCTTCGTGTGAGTTACTGGAAGCAAGGAAAG
CGACCACGGATGAGTTACAACTGGTGCATACACAGGAACATACATTGCGGTATGGGACAA
CTTCACTTGCGAGGAAAGAACTAGAATTGACAAGCAAGTTCATAGTTCTCCCATGTGGTG
GTGTGGGCGTGGATAATGGAATTGACATCGATACTGTGTGGAATGAACTTGATACCATCA
ATGCAGCACGAATGGCTGTTGGTTGTACGGTAGACATCACATTAGAAGTTGCACAGAATC
GATTGAAGAATGGATTTGCTCTCGTTCGACCACCAGGACATCATGCTCAGAAAGATCTTG
CAATGGCTTTCTGTTACTTTAACTCAGTAGCAGTGGCTGCAAGGAAATTACAACATGAAT
GTCCAGATACAGTGAGACGTGTGCTTATAGTGGATTGGGATGTACATCATTGTAATGGAA
CTCAGAATATTTTCTTTGATGATCCATCAGTGCTTGTTATATCCATACATAGATATGATT
CTGGGAACTTTTTTCCTGGAACTGGAGCCATTAATGAGTGTGGGCGTGGAGGAGGGCTTG
GGTATAATGTGAACATAGGGTTCAGTGGTGGGCTTGATCCTCCCATGGAAGATGCCGATT
ACTTGGCTGTTTTTCGCACAATTGTTCTTCCCATTGCCCGTCAGTTTGATCCTCACTTTG
TCCTCGTGTCGTGCGGGTTCTCGGCAGCCAACGGACATCCTTCAACACTAGGTGGCTACA
AGCTGACCCCCAATTGTTACGGGTTGCTGACAAGATTATTATCTGAGGTAGCAGGTGGGA
AGATAGTGTTGGTGTTGGAGGGGGGGTTTGAACTTGAACCCTTGTGTGATTGCACGGAAG
CTTGTGTTCGAACATTGCTTGGCAACCATGAGTATTCTAATTTATCCATGGAAAGCATGG
AGAGAAGGCCATCTAAAAATGCAATTGATACCATTAAAAATGTCATCACTATACAAGAAA
AACACTGGAAAGGATTAGATTTATCATCTGTTGATATGAGTCATCTCGAGTGGTTGAGAG
TTTCAAGAGAAAATGAAACTTGTGTTGCTATGGCTTCACTTAGTGTGGAAAATAAATCTG
GAAACGAACCCAACACTATATCAGAACCCGAAGCACACCAACAACCTGTGGATTTGTCAA
ATAACAAATCTACTTATCAGCAACCTCATCAGTCCGCTGATGTGTATTTTTATGAAAACT
GTGGTGGATCCATGAGTGCAGATTCCTCACCATTAGATGTGGTTGGTTTGTCCACACCTT
CATCACCTGCAACTAAACAATCAGATACCATGGATACAATGAACCAAACATCTACGACCG
AGTCTCAACCCATGGCTGGTGTATGACTATTTAATGGATAGACATGAAAGAATGAAACTT
CAAGCGAATCTTGGAACGAGCGTTTGTTGTTTACAATCTCATTCGTCACGCTTTATGTGC
AATCTGTTCGCATGTCACTATTCGAAATGAAGTTGCAATGCTTAATCAACATTGAAAAAA
AGTGATGGTGATCATTATTCATGGTAGGATTACTGAAGAGTGGACACACTGTGTAAAGAG
AGTATCTGATTCAACATCTATTGTCACATAGATGCGCTATATGTGTCAAATCATGATTGT
ACAGCAGACCTCAATTTGTAGTGTCCACGATGACTGAATATCCTCTCACCCCACACTCTA
TTGGTACGGTGCTGGGAAACAGATGTAATTTTAGCAAACCAGATGTAGTACTCCAACCCA
TCATTAGTGCTGCCAGGATATTCAAACTTGCTGTAATATTGCACATATTTCATGCTTTGA
AGACTTTTTCTGCATCTTTTTACCCGGTCACCACAAGGCAAGTTTCAGCTTTTTATTTTT
TATACTTGCTCGGCAAAATGTTTTAAATCCTGTGCCACTTTTTGGCAAACTATTTCTCGC
TGCTTAGTATTAAAAATGTGTTACGTGTATTTACGTAGGAATCGCTTCATTCTTATCATG
GTTGCCAACATTATTAAGCTGCCCAACTTGCAGCTTTGCGTATTTACTTTGGAGTAAGTA
TTTTTCTACTACGAAAATATTACTACAGTACATACATCTGAACAATGCTTTAACAACAAA
CACATCTAATTTCTATCATTAAGTTTTTAATACTGGTTTAAACTGGTTCGAAATCCATTC
GATTCAACATAATATTACTGTTTAATTGGATCCTCTAATCATAACAAAATTTAAAATATA
GTAGCAAATTAATTGTCTATTTGTTTGAACTGCACAAAGAAGCTTTGAACACATCATTCC
ATCACATTCCTTGTTTACATAATTTAATTTTGACTGTTCCATTTTCTTGATCATTGTTGC
ATAAGATTTTTATTAAGTGACCCTGTGCTGTGTATATATCCATATATATGATGTCCTGAA
AAGCGCCCCTGCTGGTTACATCCGTTAAAAACTGTTTATGACGAATAAACGAAAAAGATT
TTTGATACACAATACGTGGCTTCTTGAATTTCGGAGGCTTGTGCTGCGACAGTTATAGAC
ATAACGTTTAAAAATAAATGGGTTCAAGGCTCATCATAATTGTGGGCGTATGTGTCCTTG
GGCAAGACACTTAACGACA

InterProScan

PIRSF
Histone_deAcase_II_euk (IPR017320) - T[31-1024] 9.2E-223
PANTHER
His_deacetylse (IPR000286) - T[83-970] 0.0
Gene3D
His_deacetylse_dom_sf (IPR037138) - T[579-997] 1.5E-148
SUPERFAMILY
Ureohydrolase_dom_sf (IPR023696) - T[584-972] 1.29E-101
Pfam
His_deacetylse_dom (IPR023801) - T[606-932] 4.6E-71
PRINTS
His_deacetylse (IPR000286) - T[738-761] 5.2E-13 - T[774-789] 5.2E-13 - T[865-875] 5.2E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HDAC4_HUMAN 50.976 % 472 1.04E-148
HDAC9_HUMAN 37.74 % 504 1.39E-161
HDAC7_HUMAN 47.619 % 444 1.45E-139





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