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  1. Transcript 'KH2012:KH.C10.148.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.148.v1.A.nonSL5-1

Possible name(s)

ERG; FEV; FLI1

Location

KhC10 [4,377,452 / 4,387,939]

Sequences

Amino acid sequence

Length: 687

>KH.C10.148.v1.A.nonSL5-1
TTNLITIGDREKTTPPAGNKDFGARRFAMTQTVPDTSAYVKEALSLVCEDNSLFDVFQHS
PTFKPSNETRSLLLKEIPSPSNVIPSSPSVLTSLSSTASVSSSASSPAIMGTSPGFPMNP
MADMESYNAQFYPSWGQQQAGSPMMQTYDSTTNYATPPLNYPCNAMYGVKTERCDGAGFD
QVNPQAAGHPLPQRSLHPNKISNGSTFPTAPASGTPGEDPRSSTDGFSTSEGNKKNKRVL
VPADPLIWSPCHVTAWLEWVVNEYGLHHIDLTKFSSVTGTELCRMNVEDLTRYTTRYNSE
VLVQHLKFLKQAALHQLPVIKSEKLGTMSSPLTIEDYRAIYQGSESSGEKLSVEETYNLL
GPLCSRLCKQGGGQIQLWQFLLELLSDPANATCITWEGTSGEFKMVDPDEVARRWGERKS
KPNMNYDKMSRALRYYYDKNIMTKVHGKRYAYKFDFHGLAQAIQVTNNSDRYGYTYTQTP
RLPSYAESMKNSYSTSDTESSSAPSFHLPTPDDSVFPQHPFSSSGHLPPQIYPPHSSEYN
ERHSWSEHSASGYYSNGYEAPPSIGEISSARSTSSAGGSAGDFPDTPYNFHPPNNFAPYT
VPPQNISSNPVTTSYYSTPGQFAPSSYETPYSSTMTSHNMTSQPMTSPTNMYTCGQEAYS
VAPAGSLQQNAYHKPLEQINIDSGVLY

Nucleotide sequence

Length: 2,794

>KH2012:KH.C10.148.v1.A.nonSL5-1
CACTTATTCATTCCTACTCTCGCAAGACATACACTGCAACTGCAGCAATAGAAAAATCCA
GTTTATCCGAATTTAAATCAAGTGCAAGCATATAGAGAGGACTTTTTGCTTAAATAAACG
ACAAATCTGATCACCATTGGAGATCGGGAAAAAACAACTCCGCCGGCCGGGAATAAGGAC
TTTGGAGCCCGCCGATTCGCCATGACGCAAACTGTACCTGATACCTCAGCTTACGTAAAG
GAAGCACTGTCATTGGTCTGCGAAGATAATTCACTTTTTGACGTTTTTCAACATTCCCCA
ACTTTTAAACCAAGCAACGAAACCCGGTCACTGCTGCTAAAAGAAATCCCTTCACCCTCA
AACGTCATCCCAAGCTCTCCCTCTGTTCTGACGTCATTATCGTCTACGGCATCAGTGTCG
TCATCAGCGTCGTCACCAGCAATAATGGGCACGTCCCCGGGTTTTCCCATGAACCCAATG
GCTGATATGGAAAGTTACAATGCTCAGTTCTACCCTAGTTGGGGCCAACAACAAGCAGGC
AGCCCCATGATGCAAACTTACGATTCTACAACTAATTACGCAACGCCTCCACTCAACTAC
CCGTGCAATGCAATGTACGGAGTGAAGACAGAAAGATGCGACGGTGCTGGATTTGATCAA
GTCAACCCACAAGCAGCAGGGCACCCTCTTCCTCAAAGATCACTGCATCCAAATAAAATA
AGCAACGGGTCAACTTTCCCAACCGCTCCTGCATCCGGAACTCCGGGAGAAGATCCGAGA
TCATCAACAGATGGTTTCTCAACATCCGAAGGAAACAAAAAGAACAAAAGAGTTCTTGTG
CCCGCAGACCCTTTAATTTGGAGTCCATGCCACGTCACTGCATGGTTGGAATGGGTGGTA
AATGAATACGGTCTCCATCATATTGATCTCACCAAGTTTAGCTCTGTTACTGGGACCGAA
CTATGCCGAATGAATGTTGAAGACTTGACAAGATACACGACAAGATATAACAGCGAGGTT
CTTGTCCAACACCTTAAGTTTCTAAAGCAGGCCGCATTGCACCAACTGCCAGTTATAAAA
TCCGAAAAACTCGGGACGATGTCGTCTCCACTCACCATCGAAGATTACAGAGCAATTTAC
CAAGGATCGGAATCATCTGGTGAAAAACTCTCCGTCGAAGAAACTTACAACCTCCTTGGT
CCACTATGCAGCAGACTTTGCAAGCAAGGCGGTGGTCAGATCCAACTGTGGCAGTTTCTT
CTCGAGTTATTGAGCGATCCAGCGAACGCAACTTGCATTACATGGGAGGGAACGAGTGGA
GAGTTTAAAATGGTGGATCCGGATGAGGTGGCTCGTAGATGGGGAGAGAGGAAAAGCAAA
CCCAACATGAACTATGATAAAATGAGCCGAGCACTCAGATATTACTACGACAAGAACATA
ATGACGAAGGTTCACGGCAAGAGATATGCTTACAAGTTCGACTTCCATGGTCTCGCACAA
GCAATACAAGTCACAAACAACTCTGATAGATACGGTTATACTTACACACAGACACCTCGT
TTACCAAGCTATGCCGAGTCAATGAAGAACTCTTACTCCACTTCGGACACAGAGTCATCA
TCCGCTCCAAGCTTCCACCTTCCAACCCCGGATGACTCCGTCTTTCCTCAACATCCATTC
TCCAGCTCCGGACACCTTCCTCCTCAAATCTACCCGCCTCATTCCTCCGAATACAATGAG
CGTCACTCCTGGTCGGAGCACTCCGCTTCCGGTTACTATAGCAACGGGTATGAAGCGCCT
CCAAGCATTGGTGAAATCTCCTCAGCAAGAAGCACTTCCTCTGCAGGTGGGTCCGCCGGG
GACTTTCCTGACACCCCCTACAACTTCCACCCTCCAAACAATTTCGCCCCATACACAGTA
CCCCCACAGAATATATCTTCCAATCCTGTGACAACGTCCTACTATTCCACACCGGGACAG
TTTGCACCGTCTTCTTACGAAACACCTTATTCTTCGACCATGACGTCGCACAATATGACG
TCACAACCAATGACGTCACCGACAAACATGTACACTTGCGGCCAAGAGGCGTATTCGGTC
GCTCCTGCAGGCTCGCTACAGCAAAACGCGTATCACAAACCTCTAGAACAGATAAACATA
GATTCTGGTGTTTTATACTGAACATACCATAGACAATATCTTCATGAGCTTCTCCACATA
CTTATTTTCTTGGTGTTTATTTAACGGTTAAACACAATACATTTAGTTACATAGTTCCAA
ATAACCTTCAGGCATCCTACGCACTGTGCAATTCAAAGTTCAGACTCGTATAGGTCTGTT
CCTATTTAACTGCTACATATTGTAAATATTCTGCTTCAGCAGTCCCCTAAAGCACAATCA
TTATACGTCTTCAAGCGAGTTCTATGTAAGCTGTCTTTACATACTTTCTTCAATTATTGC
GGTTACGTATTTATGCATTTTACAATGTCATTGCGACGTTGGTTTTCGCTTATTTTNACA
GTGCGGGCACTGCTAAAATACACATTTCGTTTTTTAACCCCGAAAATAATGTTATTTTCC
CCCTAACAGCATAAGCGCGATTTTCCCGTACTGTCCATTTAAAAAAAAATGGAAATCAGC
TTCCATAATGACATATATTATAGTATGATAGATCATTTCATGTTTTTTGAACGGGCCTAT
ACAAACTTCATACTTTTCTAGAATTGCGTCTTTTTACTGCTACGTTTTCTTCGCTTTTTA
ATTTTCAATAAAAAGACGAAAAATGCAAAAAAAA

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[207-313] 1.6E-24
ProSiteProfiles
Pointed_dom (IPR003118) - T[227-313] 41.811
SMART
Pointed_dom (IPR003118) - T[229-313] 2.3E-16
Pfam
Pointed_dom (IPR003118) - T[233-312] 9.2E-19
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[363-469] 4.5E-48
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[373-495] 5.44E-49
SMART
Ets_dom (IPR000418) - T[374-459] 5.3E-59
PRINTS
Ets_dom (IPR000418) - T[375-388] 3.7E-30 - T[399-417] 3.7E-30 - T[418-436] 3.7E-30 - T[437-455] 3.7E-30
ProSiteProfiles
Ets_dom (IPR000418) - T[375-455] 47.144
Pfam
Ets_dom (IPR000418) - T[376-454] 6.3E-36
ProSitePatterns
Ets_dom (IPR000418) - T[377-385] . - T[421-436] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FLI1_HUMAN 56.225 % 292 1.27E-91
ERG_HUMAN 84.259 % 207 1.22E-59
FEV_HUMAN 66.912 % 184 1.48E-53





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