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TRANSCRIPT CARD

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  1. Region 'REG00000352'
  2. Transcript 'Haaura.CG.MTP2014.S5...'
  3. Clone 'cien143879'
  4. Clone 'AHC0AAA204YC11'
  5. Transcript 'KH2012:KH.C10.148.v2...'

Transcript Model

Transcript Id

KH2012:KH.C10.148.v2.A.nonSL1-1

Possible name(s)

ERG; FEV; FLI1

Location

KhC10 [4,377,453 / 4,387,939]

Sequences

Amino acid sequence

Length: 671

>KH.C10.148.v2.A.nonSL1-1
TTNLITIGDREKTTPPAGNKDFGARRFAMTQTVPDTSAYVKEALSLVCEDNSLFDVFQHS
PTFKPSNETRSLLLKEIPSPSNVIPSSPSVLTSLSSTASVSSSASSPAIMGTSPGFPMNP
MADMESYNAQFYPSWGQQQAGSPMMQTYDSTTNYATPPLNYPCNAMYGVKTERCDGAGFD
QVNPQAAGHPLPQRSLHPNKISNGSTFPTAPASGTPGEDPRSSTDGFSTSEGNKKNKRVL
VPADPLIWSPCHVTAWLEWVVNEYGLHHIDLTKFSSVTGTELCRMNVEDLTRYTTRYNSE
VLVQHLKFLKQAALHQLPVIKSEKLGTMSSPLTIEDYRAIYQGSESSGEKLSVEGGGQIQ
LWQFLLELLSDPANATCITWEGTSGEFKMVDPDEVARRWGERKSKPNMNYDKMSRALRYY
YDKNIMTKVHGKRYAYKFDFHGLAQAIQVTNNSDRYGYTYTQTPRLPSYAESMKNSYSTS
DTESSSAPSFHLPTPDDSVFPQHPFSSSGHLPPQIYPPHSSEYNERHSWSEHSASGYYSN
GYEAPPSIGEISSARSTSSAGGSAGDFPDTPYNFHPPNNFAPYTVPPQNISSNPVTTSYY
STPGQFAPSSYETPYSSTMTSHNMTSQPMTSPTNMYTCGQEAYSVAPAGSLQQNAYHKPL
EQINIDSGVLY

Nucleotide sequence

Length: 2,745

>KH2012:KH.C10.148.v2.A.nonSL1-1
ACTTATTCATTCCTACTCTCGCAAGACATACACTGCAACTGCAGCAATAGAAAAATCCAG
TTTATCCGAATTTAAATCAAGTGCAAGCATATAGAGAGGACTTTTTGCTTAAATAAACGA
CAAATCTGATCACCATTGGAGATCGGGAAAAAACAACTCCGCCGGCCGGGAATAAGGACT
TTGGAGCCCGCCGATTCGCCATGACGCAAACTGTACCTGATACCTCAGCTTACGTAAAGG
AAGCACTGTCATTGGTCTGCGAAGATAATTCACTTTTTGACGTTTTTCAACATTCCCCAA
CTTTTAAACCAAGCAACGAAACCCGGTCACTGCTGCTAAAAGAAATCCCTTCACCCTCAA
ACGTCATCCCAAGCTCTCCCTCTGTTCTGACGTCATTATCGTCTACGGCATCAGTGTCGT
CATCAGCGTCGTCACCAGCAATAATGGGCACGTCCCCGGGTTTTCCCATGAACCCAATGG
CTGATATGGAAAGTTACAATGCTCAGTTCTACCCTAGTTGGGGCCAACAACAAGCAGGCA
GCCCCATGATGCAAACTTACGATTCTACAACTAATTACGCAACGCCTCCACTCAACTACC
CGTGCAATGCAATGTACGGAGTGAAGACAGAAAGATGCGACGGTGCTGGATTTGATCAAG
TCAACCCACAAGCAGCAGGGCACCCTCTTCCTCAAAGATCACTGCATCCAAATAAAATAA
GCAACGGGTCAACTTTCCCAACCGCTCCTGCATCCGGAACTCCGGGAGAAGATCCGAGAT
CATCAACAGATGGTTTCTCAACATCCGAAGGAAACAAAAAGAACAAAAGAGTTCTTGTGC
CCGCAGACCCTTTAATTTGGAGTCCATGCCACGTCACTGCATGGTTGGAATGGGTGGTAA
ATGAATACGGTCTCCATCATATTGATCTCACCAAGTTTAGCTCTGTTACTGGGACCGAAC
TATGCCGAATGAATGTTGAAGACTTGACAAGATACACGACAAGATATAACAGCGAGGTTC
TTGTCCAACACCTTAAGTTTCTAAAGCAGGCCGCATTGCACCAACTGCCAGTTATAAAAT
CCGAAAAACTCGGGACGATGTCGTCTCCACTCACCATCGAAGATTACAGAGCAATTTACC
AAGGATCGGAATCATCTGGTGAAAAACTCTCCGTCGAAGGCGGTGGTCAGATCCAACTGT
GGCAGTTTCTTCTCGAGTTATTGAGCGATCCAGCGAACGCAACTTGCATTACATGGGAGG
GAACGAGTGGAGAGTTTAAAATGGTGGATCCGGATGAGGTGGCTCGTAGATGGGGAGAGA
GGAAAAGCAAACCCAACATGAACTATGATAAAATGAGCCGAGCACTCAGATATTACTACG
ACAAGAACATAATGACGAAGGTTCACGGCAAGAGATATGCTTACAAGTTCGACTTCCATG
GTCTCGCACAAGCAATACAAGTCACAAACAACTCTGATAGATACGGTTATACTTACACAC
AGACACCTCGTTTACCAAGCTATGCCGAGTCAATGAAGAACTCTTACTCCACTTCGGACA
CAGAGTCATCATCCGCTCCAAGCTTCCACCTTCCAACCCCGGATGACTCCGTCTTTCCTC
AACATCCATTCTCCAGCTCCGGACACCTTCCTCCTCAAATCTACCCGCCTCATTCCTCCG
AATACAATGAGCGTCACTCCTGGTCGGAGCACTCCGCTTCCGGTTACTATAGCAACGGGT
ATGAAGCGCCTCCAAGCATTGGTGAAATCTCCTCAGCAAGAAGCACTTCCTCTGCAGGTG
GGTCCGCCGGGGACTTTCCTGACACCCCCTACAACTTCCACCCTCCAAACAATTTCGCCC
CATACACAGTACCCCCACAGAATATATCTTCCAATCCTGTGACAACGTCCTACTATTCCA
CACCGGGACAGTTTGCACCGTCTTCTTACGAAACACCTTATTCTTCGACCATGACGTCGC
ACAATATGACGTCACAACCAATGACGTCACCGACAAACATGTACACTTGCGGCCAAGAGG
CGTATTCGGTCGCTCCTGCAGGCTCGCTACAGCAAAACGCGTATCACAAACCTCTAGAAC
AGATAAACATAGATTCTGGTGTTTTATACTGAACATACCATAGACAATATCTTCATGAGC
TTCTCCACATACTTATTTTCTTGGTGTTTATTTAACGGTTAAACACAATACATTTAGTTA
CATAGTTCCAAATAACCTTCAGGCATCCTACGCACTGTGCAATTCAAAGTTCAGACTCGT
ATAGGTCTGTTCCTATTTAACTGCTACATATTGTAAATATTCTGCTTCAGCAGTCCCCTA
AAGCACAATCATTATACGTCTTCAAGCGAGTTCTATGTAAGCTGTCTTTACATACTTTCT
TCAATTATTGCGGTTACGTATTTATGCATTTTACAATGTCATTGCGACGTTGGTTTTCGC
TTATTTTNACAGTGCGGGCACTGCTAAAATACACATTTCGTTTTTTAACCCCGAAAATAA
TGTTATTTTCCCCCTAACAGCATAAGCGCGATTTTCCCGTACTGTCCATTTAAAAAAAAA
TGGAAATCAGCTTCCATAATGACATATATTATAGTATGATAGATCATTTCATGTTTTTTG
AACGGGCCTATACAAACTTCATACTTTTCTAGAATTGCGTCTTTTTACTGCTACGTTTTC
TTCGCTTTTTAATTTTCAATAAAAAGACGAAAAATGCAAAAAAAA

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[207-313] 1.54E-24
ProSiteProfiles
Pointed_dom (IPR003118) - T[227-313] 41.811
SMART
Pointed_dom (IPR003118) - T[229-313] 2.3E-16
Pfam
Pointed_dom (IPR003118) - T[233-312] 8.9E-19
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[330-454] 6.0E-48
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[357-479] 7.35E-49
SMART
Ets_dom (IPR000418) - T[358-443] 5.3E-59
ProSiteProfiles
Ets_dom (IPR000418) - T[359-439] 47.144
PRINTS
Ets_dom (IPR000418) - T[359-372] 3.4E-30 - T[383-401] 3.4E-30 - T[402-420] 3.4E-30 - T[421-439] 3.4E-30
Pfam
Ets_dom (IPR000418) - T[360-438] 6.1E-36
ProSitePatterns
Ets_dom (IPR000418) - T[361-369] . - T[405-420] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FLI1_HUMAN 53.414 % 274 7.08E-85
ERG_HUMAN 80.556 % 196 1.45E-55
FEV_HUMAN 84.211 % 182 5.64E-53