- Transcript 'KH2012:KH.C8.139.v1....' >
- Clone 'citb099e03' >
- Transcript 'KH2012:KH.C5.61.v4.A...' >
- Transcript 'KH2012:KH.C10.365.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.365.v1.A.nonSL2-1
Possible name(s)
GAR1
Gene model
Location
KhC10 [1,394,358 / 1,395,668]
Amino acid sequence
Length: 199
>KH.C10.365.v1.A.nonSL2-1
IMSFRGNRGRGGGGFRGGGGFRGRGGGGGRGGRGRGGYGGGNRYNDEPPDYVVEIGKVMH
PCQEDLVCKCTNEKIPYFNAPIYLENKSKIGKVDEIFGQIRDFCFSIKMSDNMLASSFSS
DTKFFIDPAKLLPLQRFLPQPPGSIQKRGGRGGGRGGRGGRGGGRGGGRGGFRGRGGGGF
RGSSRGGGGRGRGGRGRGW
Nucleotide sequence
Length: 958
>KH2012:KH.C10.365.v1.A.nonSL2-1
TGACATAAACTTGAATAATGTCGTTTCGAGGGAATAGGGGTCGTGGTGGGGGTGGTTTCC
GTGGTGGAGGGGGTTTTAGGGGGCGTGGAGGGGGTGGCGGCCGGGGTGGGCGTGGCAGGG
GTGGGTACGGGGGTGGTAACCGATATAATGATGAACCTCCTGATTATGTTGTGGAGATTG
GAAAGGTGATGCATCCTTGTCAGGAAGATTTGGTTTGTAAGTGCACGAATGAAAAGATTC
CATATTTCAATGCTCCAATTTACTTGGAAAACAAATCAAAGATTGGAAAAGTTGATGAAA
TTTTTGGACAAATCCGTGACTTTTGTTTCTCAATAAAGATGAGTGACAACATGCTCGCTT
CGTCTTTCTCTTCAGACACAAAATTTTTTATTGACCCTGCCAAGCTTTTACCCCTGCAAA
GATTCTTACCCCAACCCCCAGGGTCTATACAGAAGAGAGGGGGTCGCGGGGGTGGCAGAG
GTGGCAGAGGGGGTCGCGGAGGTGGTCGTGGAGGTGGCAGGGGTGGGTTTAGAGGTCGGG
GTGGTGGTGGGTTTAGGGGAAGCTCTCGGGGTGGAGGAGGACGAGGAAGAGGTGGAAGAG
GCAGAGGATGGTGATTTTTGTCTTTTCATTCTTTCATGCTTCTTTAAACTCTTGTGCTTG
GATTTTAATGTGTGTTGCGCATATTAGACAAAAATGTGTTGCATATTTTTTAAAGTGTAT
GTCTCATACTAAACTAAAGTGTGTGTCACATATTCGACAAGATGGATAACTTTGTCTTTG
TTGCTTGTTTGGAAACTTCAAGCTAACCTAAAATGAATTTTGCAATAGAAAATTTAATCA
CTCTAAGATTAAATTGCTTTTACTGCCATAAATATTTGAAATAATGAATCTCCTTGTTTA
GTTCGTGCATAACATAATTAAGTGCCAATATTGCGGATTATTGAACTACCATGCAAAA
| PANTHER |
H/ACA_rnp_Gar1 (IPR021154) - T[2-196] 2.6E-63 |
| Pfam |
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[42-138] 3.1E-36 |
| Gene3D |
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[48-139] 1.5E-43 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[53-126] 4.59E-17 |
| ProDom |
H/ACA_rnp_Gar1 (IPR021154) - T[54-130] 2.0E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAR1_HUMAN | 67.677 % | 153 | 5.92E-47 |