Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 823

>KH.C10.37.v2.B.SL1-1
ICIISMASGAMNGNTAQQRHAQRQGPIRILNHFRGFSDALNDVTPHHQRVTIDKKYIEKS
SKLMDKVAKFCQQSKMNLKNSPPYILDILPDTYNHLRLIMLRYEDRLQVLNECEYFRIFL
DNLIKKCKEAIKLFREGRERMFDENSQQRRSLTKLSLVFSHMLAELKAEFPDGRFIGEDY
RITKSEAANFWKTTFGTRTIVQWKIFRQELNKVHPISSGLECIALKSTIDLVCNNYISNF
EFDVFTRLFQPWSNLLKNWNMLAVTHPGYMAFLTYDEVKARLLKYIHKPGSYIFRLSCTR
LGQWAVGYVTMDGQILQTIPQNKSLCQALIDGWKEGFYLFPDGRQVNPDLSGLLEQSEDD
EEHITVSQEQYELYCEMGSTFQLCKICAENNKDVRIEPCGHLICKSCLESWQEMDNSASP
TCPWCRCEIKGTETVIIEPYESEKKEEEEATGDKTCKKEKEEEKKEENKEEEDLFGEIGV
SVNKLPTPTPDASRHPPSPNMPRRQPPQPQPSPSLPTTTALSLPNDVAIKGASPIIPPRP
LSQSPLLTDRATRSLEWNAQSYAAMSGKSLTMESKNGFAKQVQKREFSPSQNRRRPVSNV
FDGVPSRDRRLPMMAGGHRSRDHSPQSTSGSYEAPETHVPPLSTDVYDFAEDPLSPAPPV
VSRPPLPNSVAGNRTGNTEDSEPSARRRVPSDYDWIMPRPKTDATPPTNLALSLADTSHP
IITSDTAPIIPPRPSPSHPSPLFATAHAAPARPTNKWGITPDPNPCPEIPPRGGKATPEP
VSDPLSLVPPPRPPKTTTAPPIPQRTLPQPHKTSAFRPPISAC

Nucleotide sequence

Length: 3,806

>KH2012:KH.C10.37.v2.B.SL1-1
GAAAATCATAAGATCATATTTAGTGTTTGTGTAAATCTGTATAATCAGCATGGCAAGTGG
GGCAATGAATGGGAACACAGCTCAGCAGAGGCATGCACAAAGACAGGGGCCTATACGTAT
TCTAAACCATTTCCGAGGATTTTCCGATGCATTAAATGATGTAACACCTCACCACCAGCG
AGTTACCATAGACAAAAAATATATCGAAAAATCATCAAAACTAATGGATAAAGTTGCTAA
ATTTTGCCAGCAATCCAAGATGAATTTAAAGAACAGCCCGCCTTATATATTGGATATATT
ACCGGATACATACAATCACCTTAGACTTATAATGCTAAGATATGAAGACAGACTGCAAGT
GTTGAACGAATGCGAATACTTTCGAATTTTTCTTGATAATTTGATAAAGAAATGCAAAGA
GGCCATTAAGTTATTCCGTGAGGGCAGGGAACGAATGTTTGATGAGAATTCCCAACAACG
AAGAAGTCTTACCAAACTATCCCTCGTATTTAGCCACATGTTAGCTGAACTAAAAGCTGA
GTTTCCCGATGGTCGATTTATTGGGGAGGATTATAGAATCACTAAATCTGAAGCTGCTAA
TTTTTGGAAAACAACGTTTGGAACAAGAACTATTGTCCAGTGGAAAATATTCCGTCAAGA
ATTAAACAAAGTTCACCCCATTTCATCTGGCCTTGAATGCATTGCGTTGAAATCCACTAT
AGACCTTGTGTGTAACAACTACATATCCAACTTTGAGTTTGACGTGTTCACAAGGCTTTT
CCAGCCGTGGTCAAACCTACTAAAGAACTGGAACATGCTTGCAGTCACACACCCAGGGTA
CATGGCGTTTCTAACTTATGATGAGGTGAAAGCACGTCTGCTTAAGTACATCCACAAACC
TGGAAGTTACATCTTCCGATTGAGTTGTACAAGGTTGGGACAATGGGCGGTTGGTTATGT
CACAATGGATGGTCAAATACTTCAAACTATTCCTCAAAACAAATCTTTGTGTCAAGCATT
AATTGATGGCTGGAAAGAGGGGTTTTATTTGTTCCCTGATGGTCGACAAGTGAATCCTGA
CCTCTCTGGACTCCTGGAGCAATCAGAGGATGATGAAGAGCACATAACAGTGAGCCAGGA
ACAATATGAGCTTTACTGTGAGATGGGATCCACCTTTCAACTTTGTAAGATATGTGCCGA
GAACAATAAAGATGTGAGAATCGAACCCTGTGGTCACCTCATCTGTAAATCGTGCCTCGA
ATCATGGCAGGAAATGGATAACTCAGCTTCACCTACTTGTCCGTGGTGTCGATGTGAAAT
TAAAGGCACAGAGACCGTGATTATTGAACCGTATGAATCAGAGAAGAAAGAAGAAGAAGA
AGCAACTGGAGATAAAACATGTAAAAAAGAGAAAGAAGAAGAGAAAAAGGAAGAGAACAA
AGAAGAAGAAGATTTGTTCGGAGAAATTGGGGTTTCTGTTAATAAGTTACCAACCCCTAC
CCCTGATGCATCCCGTCACCCCCCTTCACCCAACATGCCCCGTAGACAACCCCCACAACC
CCAACCTTCACCCAGCCTACCTACAACTACAGCACTTAGCCTACCTAATGATGTGGCAAT
CAAAGGAGCGAGTCCAATAATTCCCCCGCGACCATTATCACAATCCCCATTACTTACTGA
CCGTGCTACAAGAAGTCTAGAATGGAACGCACAATCATACGCTGCAATGAGTGGAAAGTC
ATTGACAATGGAATCTAAGAACGGGTTTGCTAAACAGGTTCAGAAACGAGAATTTTCACC
ATCACAAAATAGAAGGAGACCCGTCAGTAACGTGTTTGATGGAGTTCCTTCTCGTGATCG
AAGGTTACCAATGATGGCGGGTGGACACAGGAGTCGGGACCACAGCCCTCAATCTACCTC
GGGGTCATATGAGGCACCCGAAACCCATGTACCCCCTCTATCAACCGATGTTTACGACTT
TGCTGAAGATCCTCTCTCTCCAGCGCCCCCAGTGGTCAGTCGACCACCACTACCGAACAG
TGTTGCCGGTAATCGAACTGGAAACACTGAGGATAGCGAACCAAGTGCTCGACGTCGCGT
ACCAAGCGATTATGACTGGATAATGCCGAGACCAAAGACCGATGCCACGCCCCCAACCAA
CCTTGCGCTCTCATTGGCCGATACCTCACATCCCATTATTACATCAGACACTGCCCCGAT
TATCCCACCCCGCCCCTCACCCTCCCACCCATCACCCCTGTTCGCCACTGCCCACGCAGC
CCCAGCACGACCCACAAATAAATGGGGAATCACCCCAGACCCCAACCCTTGCCCCGAAAT
CCCACCAAGAGGGGGTAAAGCAACCCCAGAACCGGTTTCCGACCCTTTATCCCTTGTACC
CCCACCTAGGCCCCCTAAAACCACCACAGCACCTCCAATTCCACAACGTACACTACCCCA
ACCCCACAAGACAAGCGCCTTCCGACCCCCCATCTCAGCATGTTGACTTAGATTGCGAAA
TAGCTCGGCTTATGGAGCTCGGTTATTCATTTGACGACGTCAACCGTGCGCTGTCGATTG
CCAACAACAACTCGGCGGTCGCCGCACAAATTCTTCGCAGCTTTGTCTCCACTTTCACTT
GACCAACCACACAGACATCATATAAAACATGGCAAGCGAGACAAGAACTTAACACTCGAT
GGAGCAAATCTCTCGGATATTTCTCAGGAGTCTGTATCTGCACTCACATGACGTCGCGAG
AGCTTCTTATCAAGTTAGGGTATTCCCCCAAACCGAACCTTCCAAGCTTAAAATGTTATT
TCCATGAGCTATTAGTCGTGTACAGCGTGGGATAGACACACCATTTCTTCAAAATATCAG
CCTAATCGCTTACATTGGCCACCAAGTGTACAATACGCTGTACAGGACGTTTTCACTTGT
GTATCAATTCTTATGTCATAACAACAAAACGATTTTAGTTAATCAGCAAAAATTTCCATG
TTTTTTTTGTTAAACTTCAAAATATGGGTTTAGTATTTTATTTTAAAGCTTTCAAATTCA
ACCACAAAAAGTTAACTTCAAATTAATAAATTTACTTTAATTATTAGTTTAACATTAATT
TGTGTCTCACAGAAGAGATTGGCATTATTAAATTTTCATAAATTTTACATGATTTTAAAA
ATAAAGTCATTGTCATAATTATATCAGTACAAATCAAGCGATTAATATACATTTCATTAA
TAATCGATTGATATCATTTTATTTGTTTTTGTAATATTTCTCGTATCTTAAATAGATGTT
TTGTAAGCGTTGCATATTCCTAAAGACAGATCTAAAAAAACATTTGAAACTTAAAATGTT
TTTTTTAATTGTCTCAACTTGTTATTACTTGTTACTTTGTGACTTTTTGTGCAATATATA
TGATTTCTATTTCCTTTCCTGCAGTTCTCTTATCTCCTAATGTATATTACGCAGGAAATC
TCCATCTTTTTAAGCATGGTTGTATTTTATCTGATCATGAATAACTTTTTTTTCACGAAA
CTTTACATTTTTCACAAGCTTTCATGATCATGATACTAGTCCAAAAGTCATGAGCAACTT
CATAAAAGTCATGAATTATTGGGGACTTTCCTATACTTTTCATGAGCCATGAAACTCGTG
ATATTTTTCACAAATCATGTATGATAGTGACATTTAAACAGCAATTGTACTCGGGTCCAG
GTTCATGGTTTTTCTTCATTATTTTCCGTCCCGATATTTTTGTGAGTCCTGGTGCCTTCT
ATCAATAACATTCAAGTTTACTCTCG

InterProScan

PANTHER	Adaptor_Cbl (IPR024162) - T[41-516] 1.0E-236 - T[532-627] 1.0E-236 - T[651-771] 1.0E-236 - T[775-799] 1.0E-236
Gene3D	Adaptor_Cbl_N_dom_sf (IPR036537) - T[46-176] 1.5E-53
ProSiteProfiles	Cbl_PTB (IPR024159) - T[48-352] 99.353
SUPERFAMILY	Adaptor_Cbl_N_dom_sf (IPR036537) - T[51-177] 1.07E-49
Pfam	Adaptor_Cbl_N_hlx (IPR003153) - T[52-175] 1.6E-52
Pfam	Adaptor_Cbl_EF_hand-like (IPR014741) - T[180-263] 5.4E-39
SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[180-264] 2.18E-33
CDD	Adaptor_Cbl_SH2-like (IPR014742) - T[257-353] 5.5125E-64
SUPERFAMILY	SH2_dom_sf (IPR036860) - T[265-351] 7.37E-46
Pfam	Adaptor_Cbl_SH2-like (IPR014742) - T[265-350] 8.4E-45
Gene3D	SH2_dom_sf (IPR036860) - T[266-351] 7.1E-46
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[357-440] 2.4E-18
SMART	Znf_RING (IPR001841) - T[384-425] 1.0E-5
ProSiteProfiles	Znf_RING (IPR001841) - T[384-426] 13.02
ProSitePatterns	Znf_RING_CS (IPR017907) - T[399-408] .