- Transcript 'KH2012:KH.C10.376.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.376.v1.B.ND1-1
Possible name(s)
CHDH
Gene model
Location
KhC10 [842,016 / 851,331]
Amino acid sequence
Length: 1,022
>KH.C10.376.v1.B.ND1-1
MLKQFLLICVVAAFLPRFLTWYYSVTINQPDEEYDFIIVGAGTTGNVIANRLTESSNVRV
LVVEAGDDAYPNPLLSIPLLVPFLQQTSTDWMYRSEPQQHACKKHGDRVSLWPRGKVIGG
SSCYNYMMYVRGDKHDYDEWAAEGAIGWDYKNILPFFKKSQNVGDPELSKEYHGTKGFIN
TGYSYTSPMAETFIKAGQKIGYESGDYNAENTIGFHRLQSSIHKGLRQSSNEYLGSIVQE
RSDRLHIVGRAHVRQIVFEDGEDGRKRASGVIYVRDDVEVKVRARKEVIVSGGAVGSPQL
LMLSGIGPKQHLNDMGIKLVADLPGVGQNMQDHVMAMAPFYGSKIPSKSTINDFTLFTGL
PDYLMGNEGPIATSGIDATAFIRSPITKRKSPDVQFIQQSAEWSTLGSSLNQKIVNIGEQ
VMEKMYETANVRGSRIIYNFVIYNVLLRPRSVGEIKLRTNSYKDHPIIQPNYLSNQTDVD
TMIEGYKVLEKLEQTKHFEDIEAKMDFSAMGCGDATEPPRSAEFYECVIRAITLNVYHAV
GTAKIGAPDDVMAVVNPRLRVYKVGGLRVADASVMPSKQSYFTVGAGTAGNVIANRLTES
PKAKVLVLEAGDNDAPSLFISVPLFAPFLQRSKRDWQYRTEPQKKACLLLKDNVCRVNLW
PRGKVIGGSSTMNYLWYVRGGKDDFDWWEKSGATGWSYKDVLPYFKKSEQAMDKNMTADF
HGTDGYLKTSYPYSSELGNIMLKAGEELGYQHTDYNAGDMVGFHLAQQTVYNGQRITSAS
SFLRPIIKERRKRLHIVGRAYVRQIVFEEGEDGRKRASGVIYVRDDVEVKVRARKEVIVS
GGAVGSPQLLMLSGIGPKQHLKDMGIPSVADLKGVGQNLKDHVYVPATIHATNLTDGISV
NDNTLFKTAFEYLLRGTGPLGYAGPEAQAMIRSSHAKTKSEWLNISELENIDCTCILYTA
LLYIYIKHDTKTLSKFLIFNGVLNPTSVGYIKLRSSNYLDHPVIQPNYLSNQKDVEIKIE
GM
Nucleotide sequence
Length: 3,411
>KH2012:KH.C10.376.v1.B.ND1-1
ATGCTCAAGCAGTTTTTATTAATATGTGTAGTTGCTGCATTTTTGCCACGATTTCTGACT
TGGTATTATTCTGTTACCATCAACCAACCAGATGAAGAGTACGATTTCATAATCGTTGGT
GCCGGCACGACCGGAAATGTGATCGCAAACCGACTTACTGAATCTTCAAACGTAAGAGTT
TTAGTAGTGGAAGCCGGAGACGATGCGTACCCAAACCCTCTCTTGTCCATTCCACTGTTG
GTCCCATTCCTGCAGCAAACGTCCACAGACTGGATGTACAGAAGCGAACCGCAACAACAT
GCTTGCAAAAAACACGGCGACAGGGTCAGTTTGTGGCCGAGGGGTAAAGTGATTGGGGGT
TCAAGTTGTTACAATTATATGATGTACGTTCGTGGGGACAAACACGATTATGATGAATGG
GCAGCAGAGGGCGCTATTGGGTGGGATTACAAGAATATTCTCCCTTTCTTTAAAAAGTCA
CAAAATGTTGGAGACCCGGAATTATCAAAGGAATACCACGGGACCAAAGGTTTTATAAAC
ACAGGATATTCCTACACCTCGCCTATGGCAGAAACGTTTATAAAGGCGGGACAGAAGATC
GGGTACGAAAGTGGAGACTACAACGCAGAAAACACGATAGGCTTTCATCGTCTGCAATCC
TCAATACATAAAGGGTTGCGTCAGAGTTCGAACGAATACCTGGGTTCAATCGTTCAAGAG
AGATCTGATCGACTGCACATTGTCGGCCGTGCTCACGTGCGCCAGATAGTGTTCGAAGAT
GGGGAGGACGGAAGAAAGCGAGCATCGGGAGTAATCTACGTCAGAGATGACGTAGAGGTG
AAAGTTAGAGCAAGGAAGGAAGTTATAGTGAGCGGGGGTGCTGTGGGAAGTCCACAACTT
CTCATGTTATCAGGGATTGGACCCAAACAACATCTTAACGATATGGGGATAAAACTTGTT
GCCGACCTGCCCGGCGTTGGACAAAACATGCAAGATCACGTCATGGCAATGGCTCCTTTC
TATGGCAGTAAGATTCCATCGAAATCGACAATCAATGATTTTACGCTGTTTACTGGACTC
CCAGATTACTTAATGGGAAATGAAGGACCAATAGCGACATCTGGAATCGACGCTACTGCT
TTCATTCGATCCCCAATCACCAAGCGAAAAAGTCCGGATGTACAGTTCATACAACAATCG
GCAGAATGGTCAACTCTAGGTTCCAGTTTAAATCAAAAGATAGTAAACATTGGAGAGCAA
GTCATGGAAAAAATGTACGAAACCGCTAATGTTCGGGGCAGCAGAATTATTTACAACTTT
GTTATATACAACGTACTCTTAAGACCCCGAAGCGTAGGAGAAATCAAACTACGAACAAAC
AGTTACAAAGACCATCCTATCATTCAACCGAACTACTTGTCTAATCAAACAGATGTAGAT
ACTATGATTGAAGGGTACAAGGTTCTAGAAAAGTTGGAACAGACAAAGCATTTCGAAGAC
ATTGAAGCGAAGATGGATTTTTCAGCCATGGGTTGTGGAGATGCAACAGAACCACCAAGA
TCAGCGGAGTTTTACGAGTGTGTAATCCGGGCGATTACATTGAATGTATATCATGCAGTT
GGAACAGCGAAGATAGGAGCTCCGGATGACGTCATGGCGGTGGTGAATCCCCGATTACGA
GTTTATAAAGTGGGTGGGTTGCGAGTGGCGGATGCTTCAGTAATGCCAAGTAAACAAAGT
TACTTTACAGTCGGGGCTGGCACGGCCGGAAATGTGATCGCAAACAGATTGACAGAATCG
CCAAAGGCAAAAGTTCTAGTGCTAGAAGCAGGGGACAACGATGCGCCGAGTTTATTCATT
TCAGTTCCGCTTTTTGCGCCGTTCCTGCAAAGATCGAAACGGGATTGGCAGTATCGAACC
GAGCCACAGAAAAAGGCTTGCCTTCTCTTGAAGGATAACGTATGTAGAGTAAACTTGTGG
CCTCGTGGAAAAGTCATTGGAGGCTCGAGTACGATGAACTACTTGTGGTATGTTCGAGGT
GGTAAAGACGACTTTGATTGGTGGGAAAAATCGGGAGCGACTGGCTGGAGTTATAAAGAT
GTGTTGCCGTACTTTAAGAAGTCTGAACAAGCTATGGATAAAAATATGACGGCAGATTTT
CACGGCACCGATGGATACTTAAAGACTTCGTATCCTTATAGCTCTGAGTTGGGAAACATA
ATGCTGAAAGCTGGAGAAGAACTAGGATACCAACACACCGACTACAACGCTGGTGATATG
GTTGGTTTCCATCTCGCCCAACAGACTGTGTACAACGGACAACGAATAACATCAGCATCT
AGTTTCTTGAGACCAATTATAAAAGAGAGACGGAAACGTCTTCACATTGTTGGTCGTGCT
TACGTGCGCCAGATAGTGTTCGAAGAGGGAGAGGACGGAAGGAAGCGAGCATCGGGAGTA
ATCTATGTCAGAGATGACGTAGAGGTGAAAGTTAGAGCAAGGAAGGAAGTTATAGTGAGC
GGGGGTGCTGTGGGAAGTCCACAACTTCTCATGTTATCAGGGATTGGACCTAAACAACAT
CTCAAAGATATGGGGATACCATCAGTAGCCGATCTCAAGGGGGTGGGTCAGAATTTGAAG
GACCATGTTTATGTTCCTGCCACCATCCATGCTACCAATCTAACCGATGGAATCTCTGTC
AACGACAACACTCTTTTTAAAACCGCCTTTGAATACCTGCTGAGAGGCACGGGTCCTTTA
GGTTACGCTGGACCAGAGGCGCAAGCGATGATAAGGTCTTCTCATGCTAAAACTAAAAGT
GAGTGGCTGAATATATCTGAACTTGAGAATATTGATTGCACTTGTATTCTATATACGGCA
TTACTATATATATATATCAAACACGACACAAAAACTCTATCAAAATTTTTGATATTCAAC
GGGGTTTTGAACCCAACCAGTGTAGGTTACATAAAGCTTCGTTCCAGCAACTATTTAGAT
CACCCTGTAATCCAACCAAACTATTTGTCCAACCAGAAAGATGTAGAAATTAAGATTGAG
GGTATGTGATTACTTGAGAAACTTGAGAATACAAAGCCTTTTAAAGAGATTGGAGCGAAG
ATGGAGCTGAGTGCGCTGAACTGTGGAGACGAACCCCAGTCCCCAAGCGACAAGTTTTAC
GAATGCATGGTGAGAGCAATAACAGGAACAAGTTATCATCCAGTTGGAACAGCGAAGATA
GGAGAACCTAGTGACGTCATGGCGGTGGTGGATCCCCGATTACGAGTTTATAAAGTGGAG
GGTTTACGGGTGGCGGATGCTTCAGTAATGCCAAGTATTCCATCAGCAAACACGCAAGCT
GCGTGTTACATGATCGGGGAGAAAGCAGCCGATATGATCAAAGAAGATTGG
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[20-327] 4.92E-64 - T[541-580] 4.92E-64 - T[584-934] 2.51E-54 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[34-334] 1.3E-69 - T[582-883] 3.4E-72 |
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[34-72] 5.7E-155 - T[114-163] 5.7E-155 - T[230-327] 5.7E-155 - T[538-578] 5.7E-155 - T[583-617] 9.5E-126 - T[662-711] 9.5E-126 - T[778-876] 9.5E-126 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[293-307] . - T[663-686] . - T[842-856] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[449-582] 1.6E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 33.062 % | 263 | 8.32E-77 |