Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.42.v1.A.SL1-1

Possible name(s)

AP1S1; AP1S2; AP1S3

Gene model

KH2012:KH.C10.42

Location

KhC10 [3,217,798 / 3,224,326]

Sequences

Amino acid sequence

Length: 179

>KH.C10.42.v1.A.SL1-1
RSQSLLKLKKVKSQHRCKMMRFMLLFSRQGKVRLQKWFNAIGDKERKKITRELVSLVLSR
RPKMCNFLDWKDYKVVYKRYASLFFCCAIEESDNELLALEVIHRFVEILDKYFGSVCELD
IIFNFEKAYFILDEFLLAGEIQESSKNKVLRAVENSDALQEENQEAEATRSILEEFGLS

Nucleotide sequence

Length: 931

>KH2012:KH.C10.42.v1.A.SL1-1
TCTTTAGTAAATTGATCTGTTTAGGTAAAAACAACACGTTTTATGTGTATTTATAAACCA
GAGATCAATGAAGTAAAAACAACTTTTAAATCACATAAGCTACTTACCGATTCTAATAGC
GAAGCCAATCTTTGTTGAAGCTGAAAAAGGTTAAATCACAGCACCGTTGCAAGATGATGC
GATTTATGCTGTTGTTTAGTAGACAAGGAAAAGTCAGACTGCAGAAATGGTTTAACGCAA
TTGGCGACAAAGAACGTAAAAAGATAACCCGGGAATTGGTCAGTCTGGTGCTGTCTCGAC
GCCCGAAGATGTGCAACTTTTTGGACTGGAAAGATTACAAGGTTGTTTACAAGCGGTATG
CTTCTTTGTTCTTCTGCTGCGCAATCGAGGAAAGTGATAACGAACTTCTTGCTCTGGAAG
TAATCCACCGTTTCGTGGAAATTCTTGACAAGTATTTTGGGAGTGTGTGTGAGCTTGATA
TTATTTTTAACTTCGAGAAAGCTTATTTCATCTTGGATGAATTCCTTCTTGCTGGTGAAA
TTCAAGAGTCCTCCAAAAACAAGGTCCTACGAGCAGTGGAGAACTCTGATGCTCTCCAGG
AAGAAAACCAAGAAGCAGAAGCAACGAGGAGCATTTTGGAAGAGTTTGGTCTCTCCTGAA
TTGCTTAAATTGACTAAATCCTTTTAGATGCAATTTCTATATCTTTAGTTATAAAGTGAT
GCCCCCCCCTACGTTTTTTGAACTTGTTGGCACTTACACAAGCCGCTGGGACCAAGGTTT
GTTTAATGTGCTCAATGAATCACGCCAATCATGCTCACAAATAATGTAAATAATCAAAAT
TTATGTACTGTATTTAAATACAATAAATGCTCAAAGTAGATACTATACGGCAGAGAAAGC
AAAAAAAACTGCAGTTTTTAAAACAATACAA

InterProScan

PANTHER	AP_complex_ssu (IPR016635) - T[12-175] 1.7E-81
Pfam	AP_mu_sigma_su (IPR022775) - T[19-158] 1.9E-56
SUPERFAMILY	Longin-like_dom_sf (IPR011012) - T[19-157] 9.16E-45
PIRSF	AP_complex_ssu (IPR016635) - T[19-170] 3.3E-67

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AP1S1_HUMAN	71.429 %	249	4.27E-86
AP1S2_HUMAN	73.125 %	253	1.13E-87
AP1S3_HUMAN	69.231 %	220	1.15E-74