Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.507.v1.A.SL9-1

Possible name(s)

UBE2D4; UBE2L3; UBE2L6

Gene model

KH2012:KH.C10.507

Location

KhC10 [2,955,732 / 2,958,459]

Sequences

Amino acid sequence

Length: 169

>KH.C10.507.v1.A.SL9-1
GVLREREKKSKKKRVYSMAATRRLTKEIADIGKGKGSAYRLINWDNILTWKVLLVPECVP
YNKGAFHIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQICLPIISPENWKPATKASQVL
NALLVLITSPEPEHPLRGDLAEEFTKDRSKFNKTAEDYTKKHAEKRPTD

Nucleotide sequence

Length: 950

>KH2012:KH.C10.507.v1.A.SL9-1
CAGGTCTGATATCCACGTTTAAAGTTAACAAAAAAAGGTTTCCTATAGGGAGTTTTAAGG
GAACGTGAAAAAAAAAGCAAAAAAAAACGAGTATACAGTATGGCGGCAACAAGAAGACTT
ACAAAGGAGATTGCAGATATCGGAAAAGGAAAAGGTTCCGCTTACAGGCTTATTAATTGG
GATAATATATTAACTTGGAAAGTGCTGCTTGTTCCAGAATGCGTTCCTTACAACAAGGGA
GCATTTCACATTGAAATCAATTTTCCCGCTGAGTACCCGTTTAAACCACCGAAAATAACT
TTCAAAACAAAGATCTATCATCCAAACATTGATGAAAAAGGCCAAATTTGTTTACCCATT
ATCAGCCCAGAAAATTGGAAACCTGCAACCAAAGCAAGTCAAGTCCTGAACGCTCTTCTG
GTTCTAATAACAAGTCCAGAGCCGGAGCATCCTCTTCGTGGAGATTTAGCTGAGGAATTC
ACAAAAGACCGATCAAAATTTAATAAAACCGCCGAAGACTACACCAAAAAACACGCCGAA
AAACGCCCAACAGATTAAAAGCCATGAAAGATTACTCTGTCAGCTGCATAAGCACACATG
CAGTTGTGCTATGAGAAAAAAAACTGTCTCTTTGTACCTTATAATTTATGGCCTATTTAA
AATCACATACATTTTACTGTCTGTCGCAGTTTTTGTTTGTTGGGATTTAAAAGTCAATCT
TACAGCACATTATATATTTCTATATGAATTCCCTTTACCCAATATCTTGTGATTTTTCGG
CTAATAGGGTGCAGCTTTTTTGTGGCCCACGCAAATACAATTTGCTATTATGGTGACTTA
TGTCTTTTGTTCTTACCGCAAAAAAAACAATATCAATGTTTATTCGCCGTTGGCGGTTTA
AAATAATCGGATCTCGCCGTAAAAAAAGCTTAAATAAACGCTTCTTATGT

InterProScan

SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[13-165] 4.2E-46
Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[16-169] 2.9E-52
CDD	UBQ-conjugat_E2 (IPR000608) - T[21-159] 1.07925E-52
ProSiteProfiles	UBQ-conjugat_E2 (IPR000608) - T[22-153] 33.232
Pfam	UBQ-conjugat_E2 (IPR000608) - T[23-158] 1.5E-40
ProSitePatterns	UBQ-conjugating_AS (IPR023313) - T[90-105] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UB2L3_HUMAN	66.883 %	218	7.15E-74
UB2L5_HUMAN	66.234 %	217	1.17E-73
UB2L6_HUMAN	50.98 %	157	8.57E-50