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TRANSCRIPT CARD

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  1. Clone 'cien87454' > 
  2. Transcript 'KH2012:KH.C8.308.v1....' > 
  3. Transcript 'KH2012:KH.C10.511.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.511.v1.A.nonSL1-1

Possible name(s)

RDH13

Gene model

KH2012:KH.C10.511

Location

KhC10 [1,433,579 / 1,438,815]

Sequences

Amino acid sequence

Length: 353

>KH.C10.511.v1.A.nonSL1-1
TEYEFYKFTCVNRVIVPLSFFSSAFGAILLIKESRGGKQCPSKERLDGKVVVVTGGSSGI
GKETAKEVAKRGATVVLGCRHMGRCEKAAKEIRIAAKSQHVVCRFLDLASLDSVTNFAKM
INQELPHIDVLINNAGIMKPRPPKATPLTEDGFERQLETNYLGHFLLTNLLMDNLTNGEQ
PGRIINVTSAAYERGSIDLEDVEKSSLEGEEKLTELYYQSKLANVLFTDALSRKEELKNR
ITCNCLNPGVVHTNIDRYSSIPLYALSVYLYKPFQWFIMKTPLQGAQTSLYLSTEPTLSK
TTGRYFDDCEFVSKTSEICDCELADKLWEASKMWTRLDERHTSVSHDLREGKS

Nucleotide sequence

Length: 1,342

>KH2012:KH.C10.511.v1.A.nonSL1-1
ACCGTTTTGTGCAGTGAATTTACTAGCTTTAAAAAACTCCTTTTACTATCTACACATAAT
TAAGTAATAAACAGACAGTAGTAACACAGGCTGGGTTATTTAAATCGTTTGGGTCACATA
CTGTGGTATGCTAGTTGTATCTGTATGAAACGTTAAACAGAATATGAGTTTTATAAATTC
ACCTGTGTTAACCGGGTTATTGTACCGCTGTCATTTTTCTCTTCGGCGTTTGGAGCCATC
CTACTCATAAAAGAAAGCAGAGGTGGGAAGCAATGTCCGAGTAAAGAGAGATTGGATGGG
AAGGTAGTTGTGGTAACTGGGGGTAGTTCGGGTATTGGGAAGGAAACTGCGAAGGAAGTT
GCAAAAAGAGGCGCAACAGTTGTCCTAGGTTGCAGGCATATGGGAAGATGTGAAAAGGCA
GCAAAAGAAATCAGAATCGCAGCAAAAAGTCAACACGTTGTTTGTAGATTCCTTGATTTA
GCAAGTCTGGATTCTGTGACTAATTTTGCAAAGATGATAAACCAAGAACTGCCACACATT
GATGTCTTAATAAACAATGCTGGAATTATGAAGCCAAGACCTCCTAAGGCAACTCCATTG
ACAGAAGATGGTTTTGAAAGACAACTAGAAACTAATTATTTGGGTCATTTTTTACTGACA
AACTTGCTTATGGATAACTTAACAAACGGAGAACAACCTGGCAGAATAATCAATGTAACT
TCTGCTGCTTATGAGAGAGGAAGTATTGATTTGGAAGATGTTGAGAAGTCATCTTTGGAG
GGGGAAGAGAAGTTAACAGAGCTTTATTACCAAAGCAAACTTGCTAATGTTCTTTTTACT
GATGCCCTGAGCAGAAAAGAAGAGCTCAAGAACAGGATAACTTGTAACTGTTTAAACCCT
GGTGTGGTCCATACCAATATTGACAGATATTCATCTATACCACTATATGCGCTGTCCGTA
TATTTATATAAACCTTTCCAATGGTTTATAATGAAGACACCGCTTCAAGGGGCACAGACA
AGTCTATATTTATCAACAGAGCCAACTCTATCTAAAACTACAGGCCGCTACTTTGACGAC
TGTGAGTTCGTGTCTAAAACAAGCGAGATATGCGACTGTGAATTGGCTGACAAACTTTGG
GAAGCCAGCAAAATGTGGACACGGCTGGATGAACGTCACACCTCTGTAAGCCATGATCTA
CGAGAAGGGAAAAGTTAAAAGTGAATATAAGAAGAAACTGCTGTTTAAAAACTGGTCTTT
TGAATATTTTCTACAAGCAGTGTTTGAAAACTTTGTCGTAAATTCCATGGGTCTCCATAT
TGTGAATTAAAAACTGCCAATA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[46-313] 2.49E-53
Pfam
SDR_fam (IPR002347) - T[49-194] 3.6E-32
PRINTS
SDR_fam (IPR002347) - T[50-67] 8.0E-17 - T[126-137] 2.4E-7 - T[126-137] 8.0E-17 - T[176-192] 8.0E-17 - T[182-190] 2.4E-7 - T[217-236] 2.4E-7 - T[239-256] 8.0E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 41.497 % 184 6.66E-56
RDH13_HUMAN 42.056 % 233 1.55E-74
RDH14_HUMAN 42.295 % 199 1.6E-61