Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.511.v1.A.nonSL15-1

Possible name(s)

RDH13

Gene model

KH2012:KH.C10.511

Location

KhC10 [1,433,579 / 1,438,754]

Sequences

Amino acid sequence

Length: 353

>KH.C10.511.v1.A.nonSL15-1
TEYEFYKFTCVNRVIVPLSFFSSAFGAILLIKESRGGKQCPSKERLDGKVVVVTGGSSGI
GKETAKEVAKRGATVVLGCRHMGRCEKAAKEIRIAAKSQHVVCRFLDLASLDSVTNFAKM
INQELPHIDVLINNAGIMKPRPPKATPLTEDGFERQLETNYLGHFLLTNLLMDNLTNGEQ
PGRIINVTSAAYERGSIDLEDVEKSSLEGEEKLTELYYQSKLANVLFTDALSRKEELKNR
ITCNCLNPGVVHTNIDRYSSIPLYALSVYLYKPFQWFIMKTPLQGAQTSLYLSTEPTLSK
TTGRYFDDCEFVSKTSEICDCELADKLWEASKMWTRLDERHTSVSHDLREGKS

Nucleotide sequence

Length: 1,281

>KH2012:KH.C10.511.v1.A.nonSL15-1
AAGTAATAAACAGACAGTAGTAACACAGGCTGGGTTATTTAAATCGTTTGGGTCACATAC
TGTGGTATGCTAGTTGTATCTGTATGAAACGTTAAACAGAATATGAGTTTTATAAATTCA
CCTGTGTTAACCGGGTTATTGTACCGCTGTCATTTTTCTCTTCGGCGTTTGGAGCCATCC
TACTCATAAAAGAAAGCAGAGGTGGGAAGCAATGTCCGAGTAAAGAGAGATTGGATGGGA
AGGTAGTTGTGGTAACTGGGGGTAGTTCGGGTATTGGGAAGGAAACTGCGAAGGAAGTTG
CAAAAAGAGGCGCAACAGTTGTCCTAGGTTGCAGGCATATGGGAAGATGTGAAAAGGCAG
CAAAAGAAATCAGAATCGCAGCAAAAAGTCAACACGTTGTTTGTAGATTCCTTGATTTAG
CAAGTCTGGATTCTGTGACTAATTTTGCAAAGATGATAAACCAAGAACTGCCACACATTG
ATGTCTTAATAAACAATGCTGGAATTATGAAGCCAAGACCTCCTAAGGCAACTCCATTGA
CAGAAGATGGTTTTGAAAGACAACTAGAAACTAATTATTTGGGTCATTTTTTACTGACAA
ACTTGCTTATGGATAACTTAACAAACGGAGAACAACCTGGCAGAATAATCAATGTAACTT
CTGCTGCTTATGAGAGAGGAAGTATTGATTTGGAAGATGTTGAGAAGTCATCTTTGGAGG
GGGAAGAGAAGTTAACAGAGCTTTATTACCAAAGCAAACTTGCTAATGTTCTTTTTACTG
ATGCCCTGAGCAGAAAAGAAGAGCTCAAGAACAGGATAACTTGTAACTGTTTAAACCCTG
GTGTGGTCCATACCAATATTGACAGATATTCATCTATACCACTATATGCGCTGTCCGTAT
ATTTATATAAACCTTTCCAATGGTTTATAATGAAGACACCGCTTCAAGGGGCACAGACAA
GTCTATATTTATCAACAGAGCCAACTCTATCTAAAACTACAGGCCGCTACTTTGACGACT
GTGAGTTCGTGTCTAAAACAAGCGAGATATGCGACTGTGAATTGGCTGACAAACTTTGGG
AAGCCAGCAAAATGTGGACACGGCTGGATGAACGTCACACCTCTGTAAGCCATGATCTAC
GAGAAGGGAAAAGTTAAAAGTGAATATAAGAAGAAACTGCTGTTTAAAAACTGGTCTTTT
GAATATTTTCTACAAGCAGTGTTTGAAAACTTTGTCGTAAATTCCATGGGTCTCCATATT
GTGAATTAAAAACTGCCAATA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[46-313] 2.49E-53
Pfam	SDR_fam (IPR002347) - T[49-194] 3.6E-32
PRINTS	SDR_fam (IPR002347) - T[50-67] 8.0E-17 - T[126-137] 2.4E-7 - T[126-137] 8.0E-17 - T[176-192] 8.0E-17 - T[182-190] 2.4E-7 - T[217-236] 2.4E-7 - T[239-256] 8.0E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	41.497 %	184	6.66E-56
RDH13_HUMAN	42.056 %	233	1.55E-74
RDH14_HUMAN	42.295 %	199	1.6E-61